RNA–Protein interactions for RNA: ENST00000238616.9

NEK9-201, Transcript of NIMA related kinase 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEK9, Length 8,310 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-201ENST00000238616 SNX8Q9Y5X2 465 aa13.85□□□□□ -0.19
NEK9-201ENST00000238616 KDM5DQ9BY66 1539 aa13.85□□□□□ -0.19
NEK9-201ENST00000238616 LRRIQ3A6PVS8 624 aaPredicted RBP13.85□□□□□ -0.19
NEK9-201ENST00000238616 ATP5HO75947 161 aa13.85□□□□□ -0.19
NEK9-201ENST00000238616 PRR23CQ6ZRP0 262 aa13.85□□□□□ -0.19
NEK9-201ENST00000238616 FAM49BQ9NUQ9 324 aa13.85□□□□□ -0.19
NEK9-201ENST00000238616 IMPAD1Q9NX62 359 aa13.85□□□□□ -0.19
NEK9-201ENST00000238616 A0A1B0GW55 424 aa13.84□□□□□ -0.19
NEK9-201ENST00000238616 DUX4L2P0CJ85 424 aa13.84□□□□□ -0.19
NEK9-201ENST00000238616 DUX4L3P0CJ86 424 aa13.84□□□□□ -0.19
NEK9-201ENST00000238616 DUX4L4P0CJ87 422 aa13.84□□□□□ -0.19
NEK9-201ENST00000238616 DUX4L5P0CJ88 424 aa13.84□□□□□ -0.19
NEK9-201ENST00000238616 DUX4L6P0CJ89 424 aa13.84□□□□□ -0.19
NEK9-201ENST00000238616 DUX4L7P0CJ90 424 aa13.84□□□□□ -0.19
NEK9-201ENST00000238616 RARBP10826 455 aa13.84□□□□□ -0.19
NEK9-201ENST00000238616 RUNX1T1Q06455 604 aa13.84□□□□□ -0.19
NEK9-201ENST00000238616 TMEM132DQ14C87 1099 aa13.84□□□□□ -0.19
NEK9-201ENST00000238616 SMTNL2Q2TAL5 461 aa13.84□□□□□ -0.19
NEK9-201ENST00000238616 SEPT12Q8IYM1 358 aa13.84□□□□□ -0.19
NEK9-201ENST00000238616 DDX56Q9NY93 547 aaKnown RBP13.84□□□□□ -0.19
NEK9-201ENST00000238616 DUX4Q9UBX2 424 aa13.84□□□□□ -0.19
NEK9-201ENST00000238616 SLC30A1Q9Y6M5 507 aa13.84□□□□□ -0.19
NEK9-201ENST00000238616 TCP11X1B4DZS4 312 aa13.84□□□□□ -0.19
NEK9-201ENST00000238616 ZBTB39O15060 712 aa13.84□□□□□ -0.19
NEK9-201ENST00000238616 AVPR1AP37288 418 aa13.84□□□□□ -0.19
NEK9-201ENST00000238616 GALNTL6Q49A17 601 aa13.84□□□□□ -0.19
NEK9-201ENST00000238616 ARHGAP15Q53QZ3 475 aa13.84□□□□□ -0.19
NEK9-201ENST00000238616 OTOAQ7RTW8 1153 aa13.84□□□□□ -0.19
NEK9-201ENST00000238616 FAM136AQ96C01 138 aa13.84□□□□□ -0.19
NEK9-201ENST00000238616 NMRK2Q9NPI5 230 aa13.84□□□□□ -0.19
NEK9-201ENST00000238616 TMEM260Q9NX78 707 aa13.84□□□□□ -0.19
NEK9-201ENST00000238616 ZNF335Q9H4Z2 1342 aaPredicted RBP13.84□□□□□ -0.19
NEK9-201ENST00000238616 NPHP3-ACAD11A0A0J9YXS1 232 aa13.84□□□□□ -0.19
NEK9-201ENST00000238616 C3orf70A6NLC5 250 aaPredicted RBP13.84□□□□□ -0.19
NEK9-201ENST00000238616 SH2B2O14492 632 aaPredicted RBP13.84□□□□□ -0.19
NEK9-201ENST00000238616 NLRP10Q86W26 655 aa13.84□□□□□ -0.19
NEK9-201ENST00000238616 EMSYQ7Z589 1322 aa13.84□□□□□ -0.19
NEK9-201ENST00000238616 NCF1BA6NI72 391 aaPredicted RBP13.84□□□□□ -0.19
NEK9-201ENST00000238616 NCF1CA8MVU1 366 aaPredicted RBP13.84□□□□□ -0.19
NEK9-201ENST00000238616 NBPF26B4DH59 902 aa13.84□□□□□ -0.19
NEK9-201ENST00000238616 CYP7B1O75881 506 aa13.84□□□□□ -0.19
NEK9-201ENST00000238616 CYP2D6P10635 497 aa13.84□□□□□ -0.19
NEK9-201ENST00000238616 NCF1P14598 390 aaPredicted RBP13.84□□□□□ -0.19
NEK9-201ENST00000238616 IRAK1BP1Q5VVH5 260 aa13.84□□□□□ -0.19
NEK9-201ENST00000238616 NEUROD4Q9HD90 331 aa13.84□□□□□ -0.19
NEK9-201ENST00000238616 STMN3Q9NZ72 180 aa13.84□□□□□ -0.19
NEK9-201ENST00000238616 CHRM3P20309 590 aa13.84□□□□□ -0.19
NEK9-201ENST00000238616 GGCXP38435 758 aa13.84□□□□□ -0.19
NEK9-201ENST00000238616 SH3BP5LQ7L8J4 393 aa13.84□□□□□ -0.19
NEK9-201ENST00000238616 KRCC1Q9NPI7 259 aaPredicted RBP13.84□□□□□ -0.19
NEK9-201ENST00000238616 HMGXB3Q12766 1538 aa13.84□□□□□ -0.19
NEK9-201ENST00000238616 NUP160Q12769 1436 aa13.84□□□□□ -0.19
NEK9-201ENST00000238616 CIAO1O76071 339 aa13.84□□□□□ -0.19
NEK9-201ENST00000238616 TXNP10599 105 aaKnown RBP13.84□□□□□ -0.19
NEK9-201ENST00000238616 PCNAP12004 261 aa13.84□□□□□ -0.19
NEK9-201ENST00000238616 ARFIP2P53365 341 aa13.84□□□□□ -0.19
NEK9-201ENST00000238616 BFSP2Q13515 415 aa13.84□□□□□ -0.19
NEK9-201ENST00000238616 HIC1Q14526 733 aa13.84□□□□□ -0.19
NEK9-201ENST00000238616 TMEM154Q6P9G4 183 aa13.84□□□□□ -0.19
NEK9-201ENST00000238616 CCDC103Q8IW40 242 aa13.84□□□□□ -0.19
NEK9-201ENST00000238616 IPMKQ8NFU5 416 aa13.84□□□□□ -0.19
NEK9-201ENST00000238616 WNK4Q96J92 1243 aa13.84□□□□□ -0.19
NEK9-201ENST00000238616 EIF2AK1Q9BQI3 630 aaKnown RBP13.84□□□□□ -0.19
NEK9-201ENST00000238616 FBXO40Q9UH90 709 aa13.84□□□□□ -0.19
NEK9-201ENST00000238616 ITGAXP20702 1163 aa13.83□□□□□ -0.19
NEK9-201ENST00000238616 NFRKBQ6P4R8 1299 aa13.83□□□□□ -0.19
NEK9-201ENST00000238616 MED8Q96G25 268 aa13.83□□□□□ -0.19
NEK9-201ENST00000238616 SPACA7Q96KW9 195 aa13.83□□□□□ -0.19
NEK9-201ENST00000238616 MCEEQ96PE7 176 aa13.83□□□□□ -0.19
NEK9-201ENST00000238616 CCDC3Q9BQI4 270 aa13.83□□□□□ -0.19
NEK9-201ENST00000238616 TK2O00142 265 aa13.83□□□□□ -0.2
NEK9-201ENST00000238616 CAND2O75155 1236 aa13.83□□□□□ -0.2
NEK9-201ENST00000238616 MYL2P10916 166 aa13.83□□□□□ -0.2
NEK9-201ENST00000238616 CAV1Q03135 178 aa13.83□□□□□ -0.2
NEK9-201ENST00000238616 FHOD1Q9Y613 1164 aa13.83□□□□□ -0.2
NEK9-201ENST00000238616 COASYQ13057 564 aa13.83□□□□□ -0.2
NEK9-201ENST00000238616 EIF2B5Q13144 721 aaKnown RBP13.83□□□□□ -0.2
NEK9-201ENST00000238616 IER5Q5VY09 327 aa13.83□□□□□ -0.2
NEK9-201ENST00000238616 NBPF15Q8N660 670 aa13.83□□□□□ -0.2
NEK9-201ENST00000238616 AHCYL2Q96HN2 611 aaKnown RBP13.83□□□□□ -0.2
NEK9-201ENST00000238616 OSBPL1AQ9BXW6 950 aa13.83□□□□□ -0.2
NEK9-201ENST00000238616 GOLPH3LQ9H4A5 285 aa13.83□□□□□ -0.2
NEK9-201ENST00000238616 ALOX15P16050 662 aaPredicted RBP13.83□□□□□ -0.2
NEK9-201ENST00000238616 NUP62P37198 522 aaPredicted RBP13.83□□□□□ -0.2
NEK9-201ENST00000238616 GPR1P46091 355 aa13.83□□□□□ -0.2
NEK9-201ENST00000238616 RAD23BP54727 409 aa13.83□□□□□ -0.2
NEK9-201ENST00000238616 ACTR2P61160 394 aa13.83□□□□□ -0.2
NEK9-201ENST00000238616 CLEC16AQ2KHT3 1053 aa13.83□□□□□ -0.2
NEK9-201ENST00000238616 YME1L1Q96TA2 773 aa13.83□□□□□ -0.2
NEK9-201ENST00000238616 ABCB6Q9NP58 842 aa13.83□□□□□ -0.2
NEK9-201ENST00000238616 AIM2O14862 343 aa13.83□□□□□ -0.2
NEK9-201ENST00000238616 CLASP2O75122 1294 aaKnown RBP13.83□□□□□ -0.2
NEK9-201ENST00000238616 GRAPQ13588 217 aa13.83□□□□□ -0.2
NEK9-201ENST00000238616 GRAPLQ8TC17 118 aaPredicted RBP13.83□□□□□ -0.2
NEK9-201ENST00000238616 TMEM143Q96AN5 459 aa13.83□□□□□ -0.2
NEK9-201ENST00000238616 NCAM1P13591 858 aa13.83□□□□□ -0.2
NEK9-201ENST00000238616 SERPINB3P29508 390 aa13.83□□□□□ -0.2
NEK9-201ENST00000238616 PRIM2P49643 509 aa13.83□□□□□ -0.2
NEK9-201ENST00000238616 CSNK2BP67870 215 aa13.83□□□□□ -0.2
NEK9-201ENST00000238616 MAPRE2Q15555 327 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms