RNA–Protein interactions for RNA: ENST00000238497.9

VPS4B-201, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS4B, Length 3,324 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-201ENST00000238497 IGSF9BQ9UPX0 1349 aa9.31□□□□□ -0.92
VPS4B-201ENST00000238497 LRRIQ4A6NIV6 560 aa9.31□□□□□ -0.92
VPS4B-201ENST00000238497 TBKBP1A7MCY6 615 aa9.31□□□□□ -0.92
VPS4B-201ENST00000238497 PDXKO00764 312 aa9.31□□□□□ -0.92
VPS4B-201ENST00000238497 KRT5P13647 590 aa9.31□□□□□ -0.92
VPS4B-201ENST00000238497 SSR1P43307 286 aaKnown RBP9.31□□□□□ -0.92
VPS4B-201ENST00000238497 LMAN1P49257 510 aa9.31□□□□□ -0.92
VPS4B-201ENST00000238497 GUCY2FP51841 1108 aa9.31□□□□□ -0.92
VPS4B-201ENST00000238497 CBWD6Q4V339 395 aa9.31□□□□□ -0.92
VPS4B-201ENST00000238497 ZCWPW2Q504Y3 356 aa9.31□□□□□ -0.92
VPS4B-201ENST00000238497 CBWD3Q5JTY5 395 aa9.31□□□□□ -0.92
VPS4B-201ENST00000238497 CBWD5Q5RIA9 395 aa9.31□□□□□ -0.92
VPS4B-201ENST00000238497 OTUD6AQ7L8S5 288 aa9.31□□□□□ -0.92
VPS4B-201ENST00000238497 CATSPER4Q7RTX7 472 aa9.31□□□□□ -0.92
VPS4B-201ENST00000238497 DAAM2Q86T65 1068 aa9.31□□□□□ -0.92
VPS4B-201ENST00000238497 RDM1Q8NG50 284 aa9.31□□□□□ -0.92
VPS4B-201ENST00000238497 ANKZF1Q9H8Y5 726 aa9.31□□□□□ -0.92
VPS4B-201ENST00000238497 ANKFY1Q9P2R3 1169 aa9.31□□□□□ -0.92
VPS4B-201ENST00000238497 AJAP1Q9UKB5 411 aaPredicted RBP9.31□□□□□ -0.92
VPS4B-201ENST00000238497 COL1A2P08123 1366 aa9.31□□□□□ -0.92
VPS4B-201ENST00000238497 A0A087WZ62 844 aa9.31□□□□□ -0.92
VPS4B-201ENST00000238497 ZBTB42B2RXF5 422 aa9.31□□□□□ -0.92
VPS4B-201ENST00000238497 HNRNPDLO14979 420 aaKnown RBP9.31□□□□□ -0.92
VPS4B-201ENST00000238497 CDR1P51861 262 aa9.31□□□□□ -0.92
VPS4B-201ENST00000238497 CRYBB1P53674 252 aaPredicted RBP9.31□□□□□ -0.92
VPS4B-201ENST00000238497 MYL7Q01449 175 aa9.31□□□□□ -0.92
VPS4B-201ENST00000238497 GPS2Q13227 327 aa9.31□□□□□ -0.92
VPS4B-201ENST00000238497 C2CD6Q53TS8 623 aa9.31□□□□□ -0.92
VPS4B-201ENST00000238497 TWF2Q6IBS0 349 aaKnown RBP9.31□□□□□ -0.92
VPS4B-201ENST00000238497 ZNF571Q7Z3V5 609 aaPredicted RBP9.31□□□□□ -0.92
VPS4B-201ENST00000238497 RPAINQ86UA6 219 aa9.31□□□□□ -0.92
VPS4B-201ENST00000238497 FDXACB1Q9BRP7 624 aaPredicted RBP9.31□□□□□ -0.92
VPS4B-201ENST00000238497 LRRC1Q9BTT6 524 aa9.31□□□□□ -0.92
VPS4B-201ENST00000238497 PI4K2AQ9BTU6 479 aa9.31□□□□□ -0.92
VPS4B-201ENST00000238497 GCOM2Q9BZD3 368 aaPredicted RBP9.31□□□□□ -0.92
VPS4B-201ENST00000238497 TUFT1Q9NNX1 390 aa9.31□□□□□ -0.92
VPS4B-201ENST00000238497 AGPAT3Q9NRZ7 376 aa9.31□□□□□ -0.92
VPS4B-201ENST00000238497 EIF4BP23588 611 aaKnown RBP9.3□□□□□ -0.92
VPS4B-201ENST00000238497 GJC1P36383 396 aa9.3□□□□□ -0.92
VPS4B-201ENST00000238497 TFF2Q03403 129 aa9.3□□□□□ -0.92
VPS4B-201ENST00000238497 BIRC3Q13489 604 aa9.3□□□□□ -0.92
VPS4B-201ENST00000238497 MEA1Q16626 185 aa9.3□□□□□ -0.92
VPS4B-201ENST00000238497 KLHDC7AQ5VTJ3 777 aa9.3□□□□□ -0.92
VPS4B-201ENST00000238497 FAM228AQ86W67 206 aa9.3□□□□□ -0.92
VPS4B-201ENST00000238497 CDR2LQ86X02 465 aaPredicted RBP9.3□□□□□ -0.92
VPS4B-201ENST00000238497 TMEM192Q8IY95 271 aa9.3□□□□□ -0.92
VPS4B-201ENST00000238497 KAT5Q92993 513 aa9.3□□□□□ -0.92
VPS4B-201ENST00000238497 SLC35C1Q96A29 364 aa9.3□□□□□ -0.92
VPS4B-201ENST00000238497 OSBPL9Q96SU4 736 aa9.3□□□□□ -0.92
VPS4B-201ENST00000238497 KRT12Q99456 494 aa9.3□□□□□ -0.92
VPS4B-201ENST00000238497 TSGA10Q9BZW7 698 aa9.3□□□□□ -0.92
VPS4B-201ENST00000238497 ATP6V0A4Q9HBG4 840 aa9.3□□□□□ -0.92
VPS4B-201ENST00000238497 KMT5AQ9NQR1 393 aa9.3□□□□□ -0.92
VPS4B-201ENST00000238497 TOPORSQ9NS56 1045 aaPredicted RBP9.3□□□□□ -0.92
VPS4B-201ENST00000238497 THEGQ9P2T0 379 aa9.3□□□□□ -0.92
VPS4B-201ENST00000238497 GAP43P17677 238 aa9.3□□□□□ -0.92
VPS4B-201ENST00000238497 PLA2G4AP47712 749 aa9.3□□□□□ -0.92
VPS4B-201ENST00000238497 SMTNP53814 917 aa9.3□□□□□ -0.92
VPS4B-201ENST00000238497 OSTNP61366 133 aa9.3□□□□□ -0.92
VPS4B-201ENST00000238497 CETN1Q12798 172 aa9.3□□□□□ -0.92
VPS4B-201ENST00000238497 HYIQ5T013 277 aa9.3□□□□□ -0.92
VPS4B-201ENST00000238497 IQCEQ6IPM2 695 aa9.3□□□□□ -0.92
VPS4B-201ENST00000238497 ANO5Q75V66 913 aa9.3□□□□□ -0.92
VPS4B-201ENST00000238497 SND1Q7KZF4 910 aaKnown RBP eCLIP9.3□□□□□ -0.92
VPS4B-201ENST00000238497 RSRC2Q7L4I2 434 aaKnown RBP9.3□□□□□ -0.92
VPS4B-201ENST00000238497 CBWD2Q8IUF1 395 aa9.3□□□□□ -0.92
VPS4B-201ENST00000238497 GOLGA6L1Q8N7Z2 621 aa9.3□□□□□ -0.92
VPS4B-201ENST00000238497 JPH2Q9BR39 696 aaPredicted RBP9.3□□□□□ -0.92
VPS4B-201ENST00000238497 IGFLR1Q9H665 355 aa9.3□□□□□ -0.92
VPS4B-201ENST00000238497 METTL14Q9HCE5 456 aaKnown RBP9.3□□□□□ -0.92
VPS4B-201ENST00000238497 CYP26B1Q9NR63 512 aa9.3□□□□□ -0.92
VPS4B-201ENST00000238497 PIN4Q9Y237 131 aaKnown RBP9.3□□□□□ -0.92
VPS4B-201ENST00000238497 INPP5FQ9Y2H2 1132 aa9.3□□□□□ -0.92
VPS4B-201ENST00000238497 JRKLQ9Y4A0 524 aa9.3□□□□□ -0.92
VPS4B-201ENST00000238497 ZSCAN5CA6NGD5 496 aaPredicted RBP9.3□□□□□ -0.92
VPS4B-201ENST00000238497 TNNI1P19237 187 aa9.3□□□□□ -0.92
VPS4B-201ENST00000238497 RARRES1P49788 294 aa9.3□□□□□ -0.92
VPS4B-201ENST00000238497 CKAP4Q07065 602 aaKnown RBP9.3□□□□□ -0.92
VPS4B-201ENST00000238497 EDRF1Q3B7T1 1238 aa9.3□□□□□ -0.92
VPS4B-201ENST00000238497 RTN4RL1Q86UN2 441 aaPredicted RBP9.3□□□□□ -0.92
VPS4B-201ENST00000238497 ALG13Q9NP73 1137 aaKnown RBP9.3□□□□□ -0.92
VPS4B-201ENST00000238497 MTCH2Q9Y6C9 303 aa9.3□□□□□ -0.92
VPS4B-201ENST00000238497 ATMINO43313 823 aaPredicted RBP9.29□□□□□ -0.92
VPS4B-201ENST00000238497 MGEA5O60502 916 aa9.29□□□□□ -0.92
VPS4B-201ENST00000238497 FGFR1P11362 822 aa9.29□□□□□ -0.92
VPS4B-201ENST00000238497 FMO5P49326 533 aa9.29□□□□□ -0.92
VPS4B-201ENST00000238497 ERVK-21P61565 698 aa9.29□□□□□ -0.92
VPS4B-201ENST00000238497 PPP2R5CQ13362 524 aa9.29□□□□□ -0.92
VPS4B-201ENST00000238497 ZNF211Q13398 564 aaPredicted RBP9.29□□□□□ -0.92
VPS4B-201ENST00000238497 TTC19Q6DKK2 380 aaPredicted RBP9.29□□□□□ -0.92
VPS4B-201ENST00000238497 C8orf74Q6P047 294 aa9.29□□□□□ -0.92
VPS4B-201ENST00000238497 PEX26Q7Z412 305 aa9.29□□□□□ -0.92
VPS4B-201ENST00000238497 PSPC1Q8WXF1 523 aaKnown RBP9.29□□□□□ -0.92
VPS4B-201ENST00000238497 LINC01599Q8WXQ3 324 aa9.29□□□□□ -0.92
VPS4B-201ENST00000238497 MBOAT7Q96N66 472 aa9.29□□□□□ -0.92
VPS4B-201ENST00000238497 FAM213AQ9BRX8 229 aa9.29□□□□□ -0.92
VPS4B-201ENST00000238497 PLCB1Q9NQ66 1216 aa9.29□□□□□ -0.92
VPS4B-201ENST00000238497 DMGDHQ9UI17 866 aaKnown RBP9.29□□□□□ -0.92
VPS4B-201ENST00000238497 INO80B-WBP1J3KQ70 363 aa9.29□□□□□ -0.92
VPS4B-201ENST00000238497 FOXN3O00409 490 aaPredicted RBP9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms