RNA–Protein interactions for RNA: ENST00000238379.9

HDHD3-201, Transcript of haloacid dehalogenase like hydrolase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDHD3, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3-201ENST00000238379 ALKAL1Q6UXT8 129 aa16.31■□□□□ 0.2
HDHD3-201ENST00000238379 TSEN34Q9BSV6 310 aaKnown RBP16.31■□□□□ 0.2
HDHD3-201ENST00000238379 TRIM6Q9C030 488 aaPredicted RBP16.31■□□□□ 0.2
HDHD3-201ENST00000238379 ISCUQ9H1K1 167 aa16.31■□□□□ 0.2
HDHD3-201ENST00000238379 TSKSQ9UJT2 592 aa16.31■□□□□ 0.2
HDHD3-201ENST00000238379 TRIM17Q9Y577 477 aa16.31■□□□□ 0.2
HDHD3-201ENST00000238379 PCDHB4Q9Y5E5 795 aa16.31■□□□□ 0.2
HDHD3-201ENST00000238379 DNAH12Q6ZR08 3092 aa16.31■□□□□ 0.2
HDHD3-201ENST00000238379 CITO14578 2027 aa16.31■□□□□ 0.2
HDHD3-201ENST00000238379 MOXD2PA6NHM9 499 aa16.31■□□□□ 0.2
HDHD3-201ENST00000238379 ENC1O14682 589 aa16.31■□□□□ 0.2
HDHD3-201ENST00000238379 CLSTN1O94985 981 aa16.31■□□□□ 0.2
HDHD3-201ENST00000238379 CALCAP01258 141 aa16.31■□□□□ 0.2
HDHD3-201ENST00000238379 ATP1A1P05023 1023 aaKnown RBP16.31■□□□□ 0.2
HDHD3-201ENST00000238379 KRT19P08727 400 aa16.31■□□□□ 0.2
HDHD3-201ENST00000238379 CTSHP09668 335 aa16.31■□□□□ 0.2
HDHD3-201ENST00000238379 ASPAP45381 313 aa16.31■□□□□ 0.2
HDHD3-201ENST00000238379 AMPD2Q01433 879 aa16.31■□□□□ 0.2
HDHD3-201ENST00000238379 PTPN11Q06124 597 aaPredicted RBP16.31■□□□□ 0.2
HDHD3-201ENST00000238379 ZBTB6Q15916 424 aa16.31■□□□□ 0.2
HDHD3-201ENST00000238379 TMEM270Q6UE05 265 aa16.31■□□□□ 0.2
HDHD3-201ENST00000238379 KIF12Q96FN5 646 aa16.31■□□□□ 0.2
HDHD3-201ENST00000238379 FAXDC2Q96IV6 333 aa16.31■□□□□ 0.2
HDHD3-201ENST00000238379 ZMAT2Q96NC0 199 aaKnown RBP16.31■□□□□ 0.2
HDHD3-201ENST00000238379 DERAQ9Y315 318 aa16.31■□□□□ 0.2
HDHD3-201ENST00000238379 A0A0A6YYK5 440 aaPredicted RBP16.3■□□□□ 0.2
HDHD3-201ENST00000238379 ANO9A1A5B4 782 aa16.3■□□□□ 0.2
HDHD3-201ENST00000238379 RECQL4O94761 1208 aa16.3■□□□□ 0.2
HDHD3-201ENST00000238379 SLU7O95391 586 aaKnown RBP16.3■□□□□ 0.2
HDHD3-201ENST00000238379 TMEM253P0C7T8 217 aa16.3■□□□□ 0.2
HDHD3-201ENST00000238379 GZMAP12544 262 aa16.3■□□□□ 0.2
HDHD3-201ENST00000238379 ATICP31939 592 aa16.3■□□□□ 0.2
HDHD3-201ENST00000238379 GUCY2FP51841 1108 aa16.3■□□□□ 0.2
HDHD3-201ENST00000238379 ZNF132P52740 706 aa16.3■□□□□ 0.2
HDHD3-201ENST00000238379 YARSP54577 528 aaKnown RBP16.3■□□□□ 0.2
HDHD3-201ENST00000238379 PAPD7Q5XG87 772 aaKnown RBP16.3■□□□□ 0.2
HDHD3-201ENST00000238379 SMYD5Q6GMV2 418 aa16.3■□□□□ 0.2
HDHD3-201ENST00000238379 RBBP8NLQ8NC74 664 aaPredicted RBP16.3■□□□□ 0.2
HDHD3-201ENST00000238379 GLT1D1Q96MS3 346 aa16.3■□□□□ 0.2
HDHD3-201ENST00000238379 ALS2CR12Q96Q35 445 aa16.3■□□□□ 0.2
HDHD3-201ENST00000238379 VRTNQ9H8Y1 702 aa16.3■□□□□ 0.2
HDHD3-201ENST00000238379 DPP3Q9NY33 737 aa16.3■□□□□ 0.2
HDHD3-201ENST00000238379 ITGA11Q9UKX5 1188 aa16.3■□□□□ 0.2
HDHD3-201ENST00000238379 JRKLQ9Y4A0 524 aa16.3■□□□□ 0.2
HDHD3-201ENST00000238379 PCDHGC5Q9Y5F6 944 aa16.3■□□□□ 0.2
HDHD3-201ENST00000238379 ANKRD62A6NC57 917 aa16.29■□□□□ 0.2
HDHD3-201ENST00000238379 CTIFO43310 598 aaKnown RBP16.29■□□□□ 0.2
HDHD3-201ENST00000238379 RTN2O75298 545 aa16.29■□□□□ 0.2
HDHD3-201ENST00000238379 RPS6KA5O75582 802 aa16.29■□□□□ 0.2
HDHD3-201ENST00000238379 FTLP02792 175 aaPredicted RBP16.29■□□□□ 0.2
HDHD3-201ENST00000238379 AKAP5P24588 427 aa16.29■□□□□ 0.2
HDHD3-201ENST00000238379 THPOP40225 353 aa16.29■□□□□ 0.2
HDHD3-201ENST00000238379 NAP1L1P55209 391 aaKnown RBP16.29■□□□□ 0.2
HDHD3-201ENST00000238379 PTK7Q13308 1070 aa16.29■□□□□ 0.2
HDHD3-201ENST00000238379 TUBB2AQ13885 445 aa16.29■□□□□ 0.2
HDHD3-201ENST00000238379 ZNF677Q86XU0 584 aa16.29■□□□□ 0.2
HDHD3-201ENST00000238379 TUBB2BQ9BVA1 445 aa16.29■□□□□ 0.2
HDHD3-201ENST00000238379 CISHQ9NSE2 258 aa16.29■□□□□ 0.2
HDHD3-201ENST00000238379 TRMT13Q9NUP7 481 aaKnown RBP16.29■□□□□ 0.2
HDHD3-201ENST00000238379 CNTN3Q9P232 1028 aa16.29■□□□□ 0.2
HDHD3-201ENST00000238379 CDC23Q9UJX2 597 aa16.29■□□□□ 0.2
HDHD3-201ENST00000238379 ST3GAL5Q9UNP4 418 aa16.29■□□□□ 0.2
HDHD3-201ENST00000238379 MYH10P35580 1976 aa16.29■□□□□ 0.2
HDHD3-201ENST00000238379 WEE2P0C1S8 567 aa16.29■□□□□ 0.2
HDHD3-201ENST00000238379 POLR2BP30876 1174 aaKnown RBP16.29■□□□□ 0.2
HDHD3-201ENST00000238379 TRIM71Q2Q1W2 868 aaKnown RBP16.29■□□□□ 0.2
HDHD3-201ENST00000238379 WDR72Q3MJ13 1102 aa16.29■□□□□ 0.2
HDHD3-201ENST00000238379 XKR4Q5GH76 650 aa16.29■□□□□ 0.2
HDHD3-201ENST00000238379 ZNF667Q5HYK9 610 aa16.29■□□□□ 0.2
HDHD3-201ENST00000238379 SMG8Q8ND04 991 aaKnown RBP16.29■□□□□ 0.2
HDHD3-201ENST00000238379 CTNNBL1Q8WYA6 563 aaPredicted RBP16.29■□□□□ 0.2
HDHD3-201ENST00000238379 BCO2Q9BYV7 579 aa16.29■□□□□ 0.2
HDHD3-201ENST00000238379 RNF39Q9H2S5 420 aa16.29■□□□□ 0.2
HDHD3-201ENST00000238379 NXF1Q9UBU9 619 aaKnown RBP16.29■□□□□ 0.2
HDHD3-201ENST00000238379 POLIQ9UNA4 740 aa16.29■□□□□ 0.2
HDHD3-201ENST00000238379 AGAP1Q9UPQ3 857 aa16.29■□□□□ 0.2
HDHD3-201ENST00000238379 IPPQ9Y573 584 aa16.29■□□□□ 0.2
HDHD3-201ENST00000238379 RALGAPA2Q2PPJ7 1873 aa16.28■□□□□ 0.2
HDHD3-201ENST00000238379 PALMO75781 387 aa16.28■□□□□ 0.2
HDHD3-201ENST00000238379 STAU1O95793 577 aaKnown RBP16.28■□□□□ 0.2
HDHD3-201ENST00000238379 CD58P19256 250 aa16.28■□□□□ 0.2
HDHD3-201ENST00000238379 ABCB4P21439 1286 aa16.28■□□□□ 0.2
HDHD3-201ENST00000238379 RBP5P82980 135 aa16.28■□□□□ 0.2
HDHD3-201ENST00000238379 TWF2Q6IBS0 349 aaKnown RBP16.28■□□□□ 0.2
HDHD3-201ENST00000238379 SCARA5Q6ZMJ2 495 aa16.28■□□□□ 0.2
HDHD3-201ENST00000238379 SLC43A3Q8NBI5 491 aa16.28■□□□□ 0.2
HDHD3-201ENST00000238379 LRRN4CLQ8ND94 238 aa16.28■□□□□ 0.2
HDHD3-201ENST00000238379 SH3TC2Q8TF17 1288 aa16.28■□□□□ 0.2
HDHD3-201ENST00000238379 RFFLQ8WZ73 363 aa16.28■□□□□ 0.2
HDHD3-201ENST00000238379 HPDLQ96IR7 371 aa16.28■□□□□ 0.2
HDHD3-201ENST00000238379 APOL6Q9BWW8 343 aa16.28■□□□□ 0.2
HDHD3-201ENST00000238379 OSBPL7Q9BZF2 842 aa16.28■□□□□ 0.2
HDHD3-201ENST00000238379 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.28■□□□□ 0.2
HDHD3-201ENST00000238379 THAP2Q9H0W7 228 aa16.28■□□□□ 0.2
HDHD3-201ENST00000238379 AGO3Q9H9G7 860 aaKnown RBP16.28■□□□□ 0.2
HDHD3-201ENST00000238379 TRIP11Q15643 1979 aa16.28■□□□□ 0.2
HDHD3-201ENST00000238379 NCANO14594 1321 aa16.28■□□□□ 0.2
HDHD3-201ENST00000238379 A0A1W2PQ45 241 aaPredicted RBP16.27■□□□□ 0.2
HDHD3-201ENST00000238379 A0A1W2PQY0 241 aa16.27■□□□□ 0.2
HDHD3-201ENST00000238379 FAM170AA1A519 330 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms