RNA–Protein interactions for RNA: ENST00000235958.4

HMGCL-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 5

Gene HMGCL, Length 1,101 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-201ENST00000235958 MIIPQ5JXC2 388 aa10.97□□□□□ -0.65
HMGCL-201ENST00000235958 CBWD5Q5RIA9 395 aa10.97□□□□□ -0.65
HMGCL-201ENST00000235958 TDRD10Q5VZ19 366 aaKnown RBP10.97□□□□□ -0.65
HMGCL-201ENST00000235958 KRT39Q6A163 491 aa10.97□□□□□ -0.65
HMGCL-201ENST00000235958 CD300LGQ6UXG3 332 aa10.97□□□□□ -0.65
HMGCL-201ENST00000235958 COLGALT1Q8NBJ5 622 aa10.97□□□□□ -0.65
HMGCL-201ENST00000235958 UROC1Q96N76 676 aa10.97□□□□□ -0.65
HMGCL-201ENST00000235958 ZNF558Q96NG5 402 aa10.97□□□□□ -0.65
HMGCL-201ENST00000235958 NKX2-4Q9H2Z4 354 aa10.97□□□□□ -0.65
HMGCL-201ENST00000235958 NDST4Q9H3R1 872 aa10.97□□□□□ -0.65
HMGCL-201ENST00000235958 TMEM8AQ9HCN3 771 aa10.97□□□□□ -0.65
HMGCL-201ENST00000235958 TAB2Q9NYJ8 693 aa10.97□□□□□ -0.65
HMGCL-201ENST00000235958 SPG21Q9NZD8 308 aa10.97□□□□□ -0.65
HMGCL-201ENST00000235958 ITGA11Q9UKX5 1188 aa10.97□□□□□ -0.65
HMGCL-201ENST00000235958 PRG3Q9Y2Y8 225 aaPredicted RBP10.97□□□□□ -0.65
HMGCL-201ENST00000235958 R3HCC1Q9Y3T6 440 aaKnown RBP10.97□□□□□ -0.65
HMGCL-201ENST00000235958 PCDHB12Q9Y5F1 795 aa10.97□□□□□ -0.65
HMGCL-201ENST00000235958 RALGAPA2Q2PPJ7 1873 aa10.97□□□□□ -0.65
HMGCL-201ENST00000235958 PODXLO00592 558 aa10.96□□□□□ -0.65
HMGCL-201ENST00000235958 PPEF2O14830 753 aa10.96□□□□□ -0.65
HMGCL-201ENST00000235958 PMM2O15305 246 aa10.96□□□□□ -0.65
HMGCL-201ENST00000235958 LRRN2O75325 713 aa10.96□□□□□ -0.65
HMGCL-201ENST00000235958 HLA-DRAP01903 254 aa10.96□□□□□ -0.65
HMGCL-201ENST00000235958 ITGB1P05556 798 aa10.96□□□□□ -0.65
HMGCL-201ENST00000235958 DNAJB2P25686 324 aa10.96□□□□□ -0.65
HMGCL-201ENST00000235958 POLR2BP30876 1174 aaKnown RBP10.96□□□□□ -0.65
HMGCL-201ENST00000235958 COPB1P53618 953 aaKnown RBP10.96□□□□□ -0.65
HMGCL-201ENST00000235958 MYL6P60660 151 aa10.96□□□□□ -0.65
HMGCL-201ENST00000235958 ERVK-21P61565 698 aa10.96□□□□□ -0.65
HMGCL-201ENST00000235958 TRPC3Q13507 836 aa10.96□□□□□ -0.65
HMGCL-201ENST00000235958 NCOA4Q13772 614 aa10.96□□□□□ -0.65
HMGCL-201ENST00000235958 SGSM1Q2NKQ1 1148 aa10.96□□□□□ -0.65
HMGCL-201ENST00000235958 APTXQ7Z2E3 356 aaKnown RBP10.96□□□□□ -0.65
HMGCL-201ENST00000235958 SPRED2Q7Z698 418 aa10.96□□□□□ -0.65
HMGCL-201ENST00000235958 C3orf58Q8NDZ4 430 aa10.96□□□□□ -0.65
HMGCL-201ENST00000235958 ANKRD20A12PQ8NF67 263 aa10.96□□□□□ -0.65
HMGCL-201ENST00000235958 TAS1R2Q8TE23 839 aa10.96□□□□□ -0.65
HMGCL-201ENST00000235958 SEMA4DQ92854 862 aa10.96□□□□□ -0.65
HMGCL-201ENST00000235958 TIFAQ96CG3 184 aa10.96□□□□□ -0.65
HMGCL-201ENST00000235958 IGSF21Q96ID5 467 aa10.96□□□□□ -0.65
HMGCL-201ENST00000235958 HPDLQ96IR7 371 aa10.96□□□□□ -0.65
HMGCL-201ENST00000235958 TGS1Q96RS0 853 aaKnown RBP10.96□□□□□ -0.65
HMGCL-201ENST00000235958 C17orf80Q9BSJ5 609 aa10.96□□□□□ -0.65
HMGCL-201ENST00000235958 SLC28A3Q9HAS3 691 aa10.96□□□□□ -0.65
HMGCL-201ENST00000235958 COQ4Q9Y3A0 265 aa10.96□□□□□ -0.65
HMGCL-201ENST00000235958 CARNS1A5YM72 827 aa10.95□□□□□ -0.66
HMGCL-201ENST00000235958 PES1O00541 588 aaKnown RBP10.95□□□□□ -0.66
HMGCL-201ENST00000235958 SPTLC1O15269 473 aa10.95□□□□□ -0.66
HMGCL-201ENST00000235958 P4HA2O15460 535 aa10.95□□□□□ -0.66
HMGCL-201ENST00000235958 RB1P06400 928 aa10.95□□□□□ -0.66
HMGCL-201ENST00000235958 TPM2P07951 284 aa10.95□□□□□ -0.66
HMGCL-201ENST00000235958 MXI1P50539 228 aa10.95□□□□□ -0.66
HMGCL-201ENST00000235958 FANCCQ00597 558 aa10.95□□□□□ -0.66
HMGCL-201ENST00000235958 KRT17Q04695 432 aa10.95□□□□□ -0.66
HMGCL-201ENST00000235958 EPC2Q52LR7 807 aa10.95□□□□□ -0.66
HMGCL-201ENST00000235958 TIGD5Q53EQ6 642 aa10.95□□□□□ -0.66
HMGCL-201ENST00000235958 TMEM173Q86WV6 379 aaPredicted RBP10.95□□□□□ -0.66
HMGCL-201ENST00000235958 SLC39A11Q8N1S5 342 aa10.95□□□□□ -0.66
HMGCL-201ENST00000235958 KLHL23Q8NBE8 558 aa10.95□□□□□ -0.66
HMGCL-201ENST00000235958 EHBP1Q8NDI1 1231 aa10.95□□□□□ -0.66
HMGCL-201ENST00000235958 FBXL13Q8NEE6 735 aa10.95□□□□□ -0.66
HMGCL-201ENST00000235958 HASPINQ8TF76 798 aa10.95□□□□□ -0.66
HMGCL-201ENST00000235958 BCL7CQ8WUZ0 217 aaPredicted RBP10.95□□□□□ -0.66
HMGCL-201ENST00000235958 ELMO3Q96BJ8 720 aa10.95□□□□□ -0.66
HMGCL-201ENST00000235958 NAP1L5Q96NT1 182 aaPredicted RBP10.95□□□□□ -0.66
HMGCL-201ENST00000235958 CRACR2AQ9BSW2 395 aa10.95□□□□□ -0.66
HMGCL-201ENST00000235958 PI4K2AQ9BTU6 479 aa10.95□□□□□ -0.66
HMGCL-201ENST00000235958 PLVAPQ9BX97 442 aa10.95□□□□□ -0.66
HMGCL-201ENST00000235958 XYLT2Q9H1B5 865 aa10.95□□□□□ -0.66
HMGCL-201ENST00000235958 CERS4Q9HA82 394 aa10.95□□□□□ -0.66
HMGCL-201ENST00000235958 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.95□□□□□ -0.66
HMGCL-201ENST00000235958 MARCH5Q9NX47 278 aa10.95□□□□□ -0.66
HMGCL-201ENST00000235958 RAB20Q9NX57 234 aa10.95□□□□□ -0.66
HMGCL-201ENST00000235958 ADAM28Q9UKQ2 775 aa10.95□□□□□ -0.66
HMGCL-201ENST00000235958 MTUS1Q9ULD2 1270 aa10.95□□□□□ -0.66
HMGCL-201ENST00000235958 NUB1Q9Y5A7 615 aa10.95□□□□□ -0.66
HMGCL-201ENST00000235958 KPNA7A9QM74 516 aa10.94□□□□□ -0.66
HMGCL-201ENST00000235958 TMEM189-UBE2V1I3L0A0 370 aa10.94□□□□□ -0.66
HMGCL-201ENST00000235958 I3L4J1 428 aa10.94□□□□□ -0.66
HMGCL-201ENST00000235958 TRAPPC3O43617 180 aa10.94□□□□□ -0.66
HMGCL-201ENST00000235958 N4BP1O75113 896 aaKnown RBP10.94□□□□□ -0.66
HMGCL-201ENST00000235958 FGF18O76093 207 aa10.94□□□□□ -0.66
HMGCL-201ENST00000235958 KIF4AO95239 1232 aa10.94□□□□□ -0.66
HMGCL-201ENST00000235958 EFEMP2O95967 443 aa10.94□□□□□ -0.66
HMGCL-201ENST00000235958 SERPINC1P01008 464 aa10.94□□□□□ -0.66
HMGCL-201ENST00000235958 ATICP31939 592 aa10.94□□□□□ -0.66
HMGCL-201ENST00000235958 CTNNB1P35222 781 aa10.94□□□□□ -0.66
HMGCL-201ENST00000235958 PNPLA4P41247 253 aa10.94□□□□□ -0.66
HMGCL-201ENST00000235958 PIK3CAP42336 1068 aa10.94□□□□□ -0.66
HMGCL-201ENST00000235958 BRCC3P46736 316 aa10.94□□□□□ -0.66
HMGCL-201ENST00000235958 MYL7Q01449 175 aa10.94□□□□□ -0.66
HMGCL-201ENST00000235958 PLCB3Q01970 1234 aa10.94□□□□□ -0.66
HMGCL-201ENST00000235958 CETN1Q12798 172 aa10.94□□□□□ -0.66
HMGCL-201ENST00000235958 MYO1EQ12965 1108 aa10.94□□□□□ -0.66
HMGCL-201ENST00000235958 NR1I3Q14994 352 aa10.94□□□□□ -0.66
HMGCL-201ENST00000235958 WDR72Q3MJ13 1102 aa10.94□□□□□ -0.66
HMGCL-201ENST00000235958 PPP2R2DQ66LE6 453 aa10.94□□□□□ -0.66
HMGCL-201ENST00000235958 TAS1R1Q7RTX1 841 aa10.94□□□□□ -0.66
HMGCL-201ENST00000235958 LRRC52Q8N7C0 313 aa10.94□□□□□ -0.66
HMGCL-201ENST00000235958 LMO3Q8TAP4 145 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms