RNA–Protein interactions for RNA: ENST00000225726.9

CCDC47-201, Transcript of coiled-coil domain containing 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC47, Length 3,466 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-201ENST00000225726 CD302Q8IX05 232 aa15.95■□□□□ 0.14
CCDC47-201ENST00000225726 ARHGEF26Q96DR7 871 aa15.95■□□□□ 0.14
CCDC47-201ENST00000225726 CAPZA3Q96KX2 299 aa15.95■□□□□ 0.14
CCDC47-201ENST00000225726 HADHBP55084 474 aaKnown RBP15.94■□□□□ 0.14
CCDC47-201ENST00000225726 GPC5P78333 572 aa15.94■□□□□ 0.14
CCDC47-201ENST00000225726 DMTNQ08495 405 aa15.94■□□□□ 0.14
CCDC47-201ENST00000225726 CLEC16AQ2KHT3 1053 aa15.94■□□□□ 0.14
CCDC47-201ENST00000225726 NOTUMQ6P988 496 aa15.94■□□□□ 0.14
CCDC47-201ENST00000225726 RBBP8NLQ8NC74 664 aaPredicted RBP15.94■□□□□ 0.14
CCDC47-201ENST00000225726 CAGE1Q8TC20 777 aa15.94■□□□□ 0.14
CCDC47-201ENST00000225726 ZNF185O15231 689 aa15.94■□□□□ 0.14
CCDC47-201ENST00000225726 NPTXRO95502 500 aa15.94■□□□□ 0.14
CCDC47-201ENST00000225726 EIF4BP23588 611 aaKnown RBP15.94■□□□□ 0.14
CCDC47-201ENST00000225726 TRIM32Q13049 653 aa15.94■□□□□ 0.14
CCDC47-201ENST00000225726 TMEM270Q6UE05 265 aa15.94■□□□□ 0.14
CCDC47-201ENST00000225726 NT5DC4Q86YG4 428 aa15.94■□□□□ 0.14
CCDC47-201ENST00000225726 GPR161Q8N6U8 529 aaKnown RBP15.94■□□□□ 0.14
CCDC47-201ENST00000225726 FAXDC2Q96IV6 333 aa15.94■□□□□ 0.14
CCDC47-201ENST00000225726 CCDC94Q9BW85 323 aaPredicted RBP15.94■□□□□ 0.14
CCDC47-201ENST00000225726 XYLT2Q9H1B5 865 aa15.94■□□□□ 0.14
CCDC47-201ENST00000225726 TRIP12Q14669 1992 aaPredicted RBP15.94■□□□□ 0.14
CCDC47-201ENST00000225726 SCN10AQ9Y5Y9 1956 aa15.94■□□□□ 0.14
CCDC47-201ENST00000225726 ZSCAN20P17040 1043 aaPredicted RBP15.93■□□□□ 0.14
CCDC47-201ENST00000225726 CAP1Q01518 475 aa15.93■□□□□ 0.14
CCDC47-201ENST00000225726 SNX17Q15036 470 aa15.93■□□□□ 0.14
CCDC47-201ENST00000225726 ACAD10Q6JQN1 1059 aa15.93■□□□□ 0.14
CCDC47-201ENST00000225726 MMS19Q96T76 1030 aa15.93■□□□□ 0.14
CCDC47-201ENST00000225726 ZNF132P52740 706 aa15.93■□□□□ 0.14
CCDC47-201ENST00000225726 CRYBB1P53674 252 aaPredicted RBP15.93■□□□□ 0.14
CCDC47-201ENST00000225726 TMEM132DQ14C87 1099 aa15.93■□□□□ 0.14
CCDC47-201ENST00000225726 TAF2Q6P1X5 1199 aa15.93■□□□□ 0.14
CCDC47-201ENST00000225726 ZNF572Q7Z3I7 529 aaPredicted RBP15.93■□□□□ 0.14
CCDC47-201ENST00000225726 CREG2Q8IUH2 290 aa15.93■□□□□ 0.14
CCDC47-201ENST00000225726 C1orf127Q8N9H9 656 aa15.93■□□□□ 0.14
CCDC47-201ENST00000225726 SIX4Q9UIU6 781 aa15.93■□□□□ 0.14
CCDC47-201ENST00000225726 C2CD2Q9Y426 696 aa15.93■□□□□ 0.14
CCDC47-201ENST00000225726 PGK1P00558 417 aa15.93■□□□□ 0.14
CCDC47-201ENST00000225726 YWHAEP62258 255 aaKnown RBP15.93■□□□□ 0.14
CCDC47-201ENST00000225726 COG1Q8WTW3 980 aa15.93■□□□□ 0.14
CCDC47-201ENST00000225726 OSGEPQ9NPF4 335 aa15.93■□□□□ 0.14
CCDC47-201ENST00000225726 RNF186Q9NXI6 227 aa15.93■□□□□ 0.14
CCDC47-201ENST00000225726 GNA15P30679 374 aa15.92■□□□□ 0.14
CCDC47-201ENST00000225726 TRIM72Q6ZMU5 477 aa15.92■□□□□ 0.14
CCDC47-201ENST00000225726 PLEKHA5Q9HAU0 1116 aa15.92■□□□□ 0.14
CCDC47-201ENST00000225726 ERICH4A6NGS2 130 aa15.92■□□□□ 0.14
CCDC47-201ENST00000225726 ADAMTS4O75173 837 aa15.92■□□□□ 0.14
CCDC47-201ENST00000225726 CALCAP01258 141 aa15.92■□□□□ 0.14
CCDC47-201ENST00000225726 ATICP31939 592 aa15.92■□□□□ 0.14
CCDC47-201ENST00000225726 RPS6KA1Q15418 735 aa15.92■□□□□ 0.14
CCDC47-201ENST00000225726 RNF14Q9UBS8 474 aa15.92■□□□□ 0.14
CCDC47-201ENST00000225726 GTF2IRD1Q9UHL9 959 aa15.92■□□□□ 0.14
CCDC47-201ENST00000225726 STXBP5LQ9Y2K9 1186 aa15.92■□□□□ 0.14
CCDC47-201ENST00000225726 DERAQ9Y315 318 aa15.92■□□□□ 0.14
CCDC47-201ENST00000225726 CITO14578 2027 aa15.92■□□□□ 0.14
CCDC47-201ENST00000225726 CES2O00748 559 aa15.92■□□□□ 0.14
CCDC47-201ENST00000225726 CYP1A2P05177 515 aa15.92■□□□□ 0.14
CCDC47-201ENST00000225726 KRT19P08727 400 aa15.92■□□□□ 0.14
CCDC47-201ENST00000225726 HOXD10P28358 340 aa15.92■□□□□ 0.14
CCDC47-201ENST00000225726 ASPAP45381 313 aa15.92■□□□□ 0.14
CCDC47-201ENST00000225726 APLP1P51693 650 aa15.92■□□□□ 0.14
CCDC47-201ENST00000225726 NBPF20Q3BBV1 942 aa15.92■□□□□ 0.14
CCDC47-201ENST00000225726 CXCL17Q6UXB2 119 aa15.92■□□□□ 0.14
CCDC47-201ENST00000225726 DAAM2Q86T65 1068 aa15.92■□□□□ 0.14
CCDC47-201ENST00000225726 XPNPEP3Q9NQH7 507 aa15.92■□□□□ 0.14
CCDC47-201ENST00000225726 SRRDQ9UH36 339 aa15.92■□□□□ 0.14
CCDC47-201ENST00000225726 ITGA11Q9UKX5 1188 aa15.92■□□□□ 0.14
CCDC47-201ENST00000225726 MTA2O94776 668 aa15.91■□□□□ 0.14
CCDC47-201ENST00000225726 KIF4AO95239 1232 aa15.91■□□□□ 0.14
CCDC47-201ENST00000225726 UNGP13051 313 aaPredicted RBP15.91■□□□□ 0.14
CCDC47-201ENST00000225726 PEX26Q7Z412 305 aa15.91■□□□□ 0.14
CCDC47-201ENST00000225726 CXorf38Q8TB03 319 aa15.91■□□□□ 0.14
CCDC47-201ENST00000225726 CISHQ9NSE2 258 aa15.91■□□□□ 0.14
CCDC47-201ENST00000225726 CTTNBP2NLQ9P2B4 639 aa15.91■□□□□ 0.14
CCDC47-201ENST00000225726 GTF3C4Q9UKN8 822 aa15.91■□□□□ 0.14
CCDC47-201ENST00000225726 PDE2AO00408 941 aaPredicted RBP15.91■□□□□ 0.14
CCDC47-201ENST00000225726 BUB1BO60566 1050 aaPredicted RBP15.91■□□□□ 0.14
CCDC47-201ENST00000225726 CYP1A1P04798 512 aaPredicted RBP15.91■□□□□ 0.14
CCDC47-201ENST00000225726 ITGB3P05106 788 aa15.91■□□□□ 0.14
CCDC47-201ENST00000225726 PRKAR2AP13861 404 aaKnown RBP15.91■□□□□ 0.14
CCDC47-201ENST00000225726 CCND3P30281 292 aaPredicted RBP15.91■□□□□ 0.14
CCDC47-201ENST00000225726 TMEM40Q8WWA1 233 aa15.91■□□□□ 0.14
CCDC47-201ENST00000225726 VRTNQ9H8Y1 702 aa15.91■□□□□ 0.14
CCDC47-201ENST00000225726 ABCB6Q9NP58 842 aa15.91■□□□□ 0.14
CCDC47-201ENST00000225726 PACSIN2Q9UNF0 486 aaPredicted RBP15.91■□□□□ 0.14
CCDC47-201ENST00000225726 COG5Q9UP83 839 aa15.91■□□□□ 0.14
CCDC47-201ENST00000225726 CXCR5P32302 372 aa15.91■□□□□ 0.14
CCDC47-201ENST00000225726 ITIH3Q06033 890 aa15.91■□□□□ 0.14
CCDC47-201ENST00000225726 ZNF667Q5HYK9 610 aa15.91■□□□□ 0.14
CCDC47-201ENST00000225726 CCDC181Q5TID7 509 aa15.91■□□□□ 0.14
CCDC47-201ENST00000225726 ZNF653Q96CK0 615 aa15.91■□□□□ 0.14
CCDC47-201ENST00000225726 PSMB7Q99436 277 aa15.91■□□□□ 0.14
CCDC47-201ENST00000225726 EIF2AQ9BY44 585 aaKnown RBP15.91■□□□□ 0.14
CCDC47-201ENST00000225726 BCO2Q9BYV7 579 aa15.91■□□□□ 0.14
CCDC47-201ENST00000225726 ELNP15502 786 aa15.9■□□□□ 0.14
CCDC47-201ENST00000225726 PPP1R2P3Q6NXS1 205 aa15.9■□□□□ 0.14
CCDC47-201ENST00000225726 NT5DC3Q86UY8 548 aa15.9■□□□□ 0.14
CCDC47-201ENST00000225726 TRIM11Q96F44 468 aa15.9■□□□□ 0.14
CCDC47-201ENST00000225726 SNX27Q96L92 541 aa15.9■□□□□ 0.14
CCDC47-201ENST00000225726 SNTG2Q9NY99 539 aa15.9■□□□□ 0.14
CCDC47-201ENST00000225726 AMFRQ9UKV5 643 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms