RNA–Protein interactions for RNA: ENST00000223641.4

SEC61B-201, Transcript of Sec61 translocon beta subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC61B, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61B-201ENST00000223641 SLC9A7Q96T83 725 aa15.12■□□□□ 0.01
SEC61B-201ENST00000223641 GDF15Q99988 308 aa15.12■□□□□ 0.01
SEC61B-201ENST00000223641 NUP58Q9BVL2 599 aa15.12■□□□□ 0.01
SEC61B-201ENST00000223641 MRPL9Q9BYD2 267 aaKnown RBP15.12■□□□□ 0.01
SEC61B-201ENST00000223641 GANQ9H2C0 597 aa15.12■□□□□ 0.01
SEC61B-201ENST00000223641 GOLGA2P5Q9HBQ8 144 aa15.12■□□□□ 0.01
SEC61B-201ENST00000223641 APEX2Q9UBZ4 518 aa15.12■□□□□ 0.01
SEC61B-201ENST00000223641 AGAP1Q9UPQ3 857 aa15.12■□□□□ 0.01
SEC61B-201ENST00000223641 DAAM1Q9Y4D1 1078 aa15.12■□□□□ 0.01
SEC61B-201ENST00000223641 TULP1O00294 542 aaPredicted RBP15.11■□□□□ 0.01
SEC61B-201ENST00000223641 PPEF2O14830 753 aa15.11■□□□□ 0.01
SEC61B-201ENST00000223641 EPHB6O15197 1021 aa15.11■□□□□ 0.01
SEC61B-201ENST00000223641 B4GALT3O60512 393 aa15.11■□□□□ 0.01
SEC61B-201ENST00000223641 GJB5O95377 273 aa15.11■□□□□ 0.01
SEC61B-201ENST00000223641 TRPC3Q13507 836 aa15.11■□□□□ 0.01
SEC61B-201ENST00000223641 SMYD5Q6GMV2 418 aa15.11■□□□□ 0.01
SEC61B-201ENST00000223641 DDX27Q96GQ7 796 aaKnown RBP15.11■□□□□ 0.01
SEC61B-201ENST00000223641 PI4K2AQ9BTU6 479 aa15.11■□□□□ 0.01
SEC61B-201ENST00000223641 NAA15Q9BXJ9 866 aaKnown RBP15.11■□□□□ 0.01
SEC61B-201ENST00000223641 EDEM3Q9BZQ6 932 aa15.11■□□□□ 0.01
SEC61B-201ENST00000223641 NRDE2Q9H7Z3 1164 aa15.11■□□□□ 0.01
SEC61B-201ENST00000223641 APOBEC3GQ9HC16 384 aaKnown RBP15.11■□□□□ 0.01
SEC61B-201ENST00000223641 TBKBP1A7MCY6 615 aa15.1■□□□□ 0.01
SEC61B-201ENST00000223641 ZBBXA8MT70 800 aa15.1■□□□□ 0.01
SEC61B-201ENST00000223641 TMEM189-UBE2V1I3L0A0 370 aa15.1■□□□□ 0.01
SEC61B-201ENST00000223641 GYPCP04921 128 aa15.1■□□□□ 0.01
SEC61B-201ENST00000223641 KRT19P08727 400 aa15.1■□□□□ 0.01
SEC61B-201ENST00000223641 UCHL3P15374 230 aa15.1■□□□□ 0.01
SEC61B-201ENST00000223641 RFX1P22670 979 aa15.1■□□□□ 0.01
SEC61B-201ENST00000223641 CLCNKBP51801 687 aa15.1■□□□□ 0.01
SEC61B-201ENST00000223641 NOP14P78316 857 aaKnown RBP15.1■□□□□ 0.01
SEC61B-201ENST00000223641 APBA1Q02410 837 aa15.1■□□□□ 0.01
SEC61B-201ENST00000223641 GCNT1Q02742 428 aa15.1■□□□□ 0.01
SEC61B-201ENST00000223641 CD300LGQ6UXG3 332 aa15.1■□□□□ 0.01
SEC61B-201ENST00000223641 TMCO2Q7Z6W1 182 aaPredicted RBP15.1■□□□□ 0.01
SEC61B-201ENST00000223641 CMTR2Q8IYT2 770 aaKnown RBP15.1■□□□□ 0.01
SEC61B-201ENST00000223641 LRRC43Q8N309 656 aa15.1■□□□□ 0.01
SEC61B-201ENST00000223641 NEK11Q8NG66 645 aa15.1■□□□□ 0.01
SEC61B-201ENST00000223641 TATDN2Q93075 761 aa15.1■□□□□ 0.01
SEC61B-201ENST00000223641 HPDLQ96IR7 371 aa15.1■□□□□ 0.01
SEC61B-201ENST00000223641 PAAF1Q9BRP4 392 aa15.1■□□□□ 0.01
SEC61B-201ENST00000223641 LSM14BQ9BX40 385 aaKnown RBP15.1■□□□□ 0.01
SEC61B-201ENST00000223641 IMPG2Q9BZV3 1241 aa15.1■□□□□ 0.01
SEC61B-201ENST00000223641 MTIF3Q9H2K0 278 aaKnown RBP15.1■□□□□ 0.01
SEC61B-201ENST00000223641 FAM207AQ9NSI2 230 aaPredicted RBP15.1■□□□□ 0.01
SEC61B-201ENST00000223641 NUB1Q9Y5A7 615 aa15.1■□□□□ 0.01
SEC61B-201ENST00000223641 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.1■□□□□ 0.01
SEC61B-201ENST00000223641 SLC4A7Q9Y6M7 1214 aa15.1■□□□□ 0.01
SEC61B-201ENST00000223641 A0A1W2PQJ5 194 aa15.09■□□□□ 0.01
SEC61B-201ENST00000223641 CASTOR2A6NHX0 329 aa15.09■□□□□ 0.01
SEC61B-201ENST00000223641 PODXLO00592 558 aa15.09■□□□□ 0.01
SEC61B-201ENST00000223641 PAX3P23760 479 aa15.09■□□□□ 0.01
SEC61B-201ENST00000223641 IGFBP6P24592 240 aaPredicted RBP15.09■□□□□ 0.01
SEC61B-201ENST00000223641 PNPLA4P41247 253 aa15.09■□□□□ 0.01
SEC61B-201ENST00000223641 AARSP49588 968 aaKnown RBP eCLIP15.09■□□□□ 0.01
SEC61B-201ENST00000223641 LILRA4P59901 499 aa15.09■□□□□ 0.01
SEC61B-201ENST00000223641 TRIM14Q14142 442 aa15.09■□□□□ 0.01
SEC61B-201ENST00000223641 ZNF699Q32M78 642 aa15.09■□□□□ 0.01
SEC61B-201ENST00000223641 WDR44Q5JSH3 913 aa15.09■□□□□ 0.01
SEC61B-201ENST00000223641 C9orf50Q5SZB4 431 aa15.09■□□□□ 0.01
SEC61B-201ENST00000223641 SPOPLQ6IQ16 392 aa15.09■□□□□ 0.01
SEC61B-201ENST00000223641 DCLRE1AQ6PJP8 1040 aa15.09■□□□□ 0.01
SEC61B-201ENST00000223641 TMC6Q7Z403 805 aa15.09■□□□□ 0.01
SEC61B-201ENST00000223641 LIMS2Q7Z4I7 341 aa15.09■□□□□ 0.01
SEC61B-201ENST00000223641 HERC6Q8IVU3 1022 aa15.09■□□□□ 0.01
SEC61B-201ENST00000223641 ARHGEF19Q8IW93 802 aa15.09■□□□□ 0.01
SEC61B-201ENST00000223641 C3orf58Q8NDZ4 430 aa15.09■□□□□ 0.01
SEC61B-201ENST00000223641 JAKMIP2Q96AA8 810 aa15.09■□□□□ 0.01
SEC61B-201ENST00000223641 FAM81BQ96LP2 452 aa15.09■□□□□ 0.01
SEC61B-201ENST00000223641 NT5C1BQ96P26 610 aa15.09■□□□□ 0.01
SEC61B-201ENST00000223641 TMEM175Q9BSA9 504 aa15.09■□□□□ 0.01
SEC61B-201ENST00000223641 CWH43Q9H720 699 aa15.09■□□□□ 0.01
SEC61B-201ENST00000223641 GDAP2Q9NXN4 497 aa15.09■□□□□ 0.01
SEC61B-201ENST00000223641 CEP72Q9P209 647 aa15.09■□□□□ 0.01
SEC61B-201ENST00000223641 IMPACTQ9P2X3 320 aa15.09■□□□□ 0.01
SEC61B-201ENST00000223641 CACNG4Q9UBN1 327 aa15.09■□□□□ 0.01
SEC61B-201ENST00000223641 DNAJB4Q9UDY4 337 aa15.09■□□□□ 0.01
SEC61B-201ENST00000223641 CAPN11Q9UMQ6 739 aa15.09■□□□□ 0.01
SEC61B-201ENST00000223641 RNF225M0QZC1 329 aaPredicted RBP15.08■□□□□ 0
SEC61B-201ENST00000223641 SPTLC1O15269 473 aa15.08■□□□□ 0
SEC61B-201ENST00000223641 TRIM21P19474 475 aaKnown RBP15.08■□□□□ 0
SEC61B-201ENST00000223641 TAF6P49848 677 aa15.08■□□□□ 0
SEC61B-201ENST00000223641 RNASELQ05823 741 aaKnown RBP15.08■□□□□ 0
SEC61B-201ENST00000223641 MYO1EQ12965 1108 aa15.08■□□□□ 0
SEC61B-201ENST00000223641 ARID5BQ14865 1188 aa15.08■□□□□ 0
SEC61B-201ENST00000223641 SHHQ15465 462 aa15.08■□□□□ 0
SEC61B-201ENST00000223641 IQCEQ6IPM2 695 aa15.08■□□□□ 0
SEC61B-201ENST00000223641 GJB7Q6PEY0 223 aa15.08■□□□□ 0
SEC61B-201ENST00000223641 ENOSF1Q7L5Y1 443 aa15.08■□□□□ 0
SEC61B-201ENST00000223641 CCDC150Q8NCX0 1101 aa15.08■□□□□ 0
SEC61B-201ENST00000223641 SP7Q8TDD2 431 aaPredicted RBP15.08■□□□□ 0
SEC61B-201ENST00000223641 BAP1Q92560 729 aa15.08■□□□□ 0
SEC61B-201ENST00000223641 ANP32BQ92688 251 aaKnown RBP15.08■□□□□ 0
SEC61B-201ENST00000223641 ELMO3Q96BJ8 720 aa15.08■□□□□ 0
SEC61B-201ENST00000223641 PCMTD1Q96MG8 357 aaPredicted RBP15.08■□□□□ 0
SEC61B-201ENST00000223641 ZNF560Q96MR9 790 aa15.08■□□□□ 0
SEC61B-201ENST00000223641 KREMEN1Q96MU8 473 aa15.08■□□□□ 0
SEC61B-201ENST00000223641 FAM193BQ96PV7 902 aaPredicted RBP15.08■□□□□ 0
SEC61B-201ENST00000223641 BCO2Q9BYV7 579 aa15.08■□□□□ 0
SEC61B-201ENST00000223641 NIF3L1Q9GZT8 377 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms