RNA–Protein interactions for RNA: ENST00000223084.7

LSM5-201, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 1,295 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-201ENST00000223084 ADAM12O43184 909 aa13.74□□□□□ -0.21
LSM5-201ENST00000223084 MBTPS2O43462 519 aa13.74□□□□□ -0.21
LSM5-201ENST00000223084 TRAPPC3O43617 180 aa13.74□□□□□ -0.21
LSM5-201ENST00000223084 PRPF40AO75400 957 aaKnown RBP13.74□□□□□ -0.21
LSM5-201ENST00000223084 SPATA31D3P0C874 917 aa13.74□□□□□ -0.21
LSM5-201ENST00000223084 CLCN4P51793 760 aa13.74□□□□□ -0.21
LSM5-201ENST00000223084 TFAMQ00059 246 aaKnown RBP13.74□□□□□ -0.21
LSM5-201ENST00000223084 POU5F1Q01860 360 aaKnown RBP13.74□□□□□ -0.21
LSM5-201ENST00000223084 KCNB1Q14721 858 aa13.74□□□□□ -0.21
LSM5-201ENST00000223084 PSMD5Q16401 504 aa13.74□□□□□ -0.21
LSM5-201ENST00000223084 LMBRD2Q68DH5 695 aaPredicted RBP13.74□□□□□ -0.21
LSM5-201ENST00000223084 SPATA31D4Q6ZUB0 917 aa13.74□□□□□ -0.21
LSM5-201ENST00000223084 HS2ST1Q7LGA3 356 aa13.74□□□□□ -0.21
LSM5-201ENST00000223084 ADAMTS19Q8TE59 1207 aa13.74□□□□□ -0.21
LSM5-201ENST00000223084 PIK3R5Q8WYR1 880 aa13.74□□□□□ -0.21
LSM5-201ENST00000223084 CCDC34Q96HJ3 373 aa13.74□□□□□ -0.21
LSM5-201ENST00000223084 TSPAN18Q96SJ8 248 aa13.74□□□□□ -0.21
LSM5-201ENST00000223084 CLSTN3Q9BQT9 956 aa13.74□□□□□ -0.21
LSM5-201ENST00000223084 KCTD10Q9H3F6 313 aa13.74□□□□□ -0.21
LSM5-201ENST00000223084 DPP3Q9NY33 737 aa13.74□□□□□ -0.21
LSM5-201ENST00000223084 C2CD2Q9Y426 696 aa13.74□□□□□ -0.21
LSM5-201ENST00000223084 TTC28Q96AY4 2481 aa13.74□□□□□ -0.21
LSM5-201ENST00000223084 ZNF233A6NK53 670 aa13.73□□□□□ -0.21
LSM5-201ENST00000223084 KIAA0391O15091 583 aaKnown RBP13.73□□□□□ -0.21
LSM5-201ENST00000223084 ADH1AP07327 375 aa13.73□□□□□ -0.21
LSM5-201ENST00000223084 SRGAP2BP0DMP2 458 aa13.73□□□□□ -0.21
LSM5-201ENST00000223084 SMAD4Q13485 552 aaKnown RBP13.73□□□□□ -0.21
LSM5-201ENST00000223084 C9orf57Q5W0N0 161 aa13.73□□□□□ -0.21
LSM5-201ENST00000223084 RSPO2Q6UXX9 243 aaPredicted RBP13.73□□□□□ -0.21
LSM5-201ENST00000223084 PPFIBP1Q86W92 1011 aa13.73□□□□□ -0.21
LSM5-201ENST00000223084 SMYD4Q8IYR2 804 aaPredicted RBP13.73□□□□□ -0.21
LSM5-201ENST00000223084 XXYLT1Q8NBI6 393 aa13.73□□□□□ -0.21
LSM5-201ENST00000223084 SMRP1Q8NCR6 262 aa13.73□□□□□ -0.21
LSM5-201ENST00000223084 SUSD3Q96L08 255 aa13.73□□□□□ -0.21
LSM5-201ENST00000223084 FBXL18Q96ME1 805 aa13.73□□□□□ -0.21
LSM5-201ENST00000223084 TIGD1Q96MW7 591 aa13.73□□□□□ -0.21
LSM5-201ENST00000223084 S1PR5Q9H228 398 aa13.73□□□□□ -0.21
LSM5-201ENST00000223084 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.73□□□□□ -0.21
LSM5-201ENST00000223084 FNIP2Q9P278 1114 aa13.73□□□□□ -0.21
LSM5-201ENST00000223084 CDH22Q9UJ99 828 aa13.73□□□□□ -0.21
LSM5-201ENST00000223084 PCDHA5Q9Y5H7 936 aa13.73□□□□□ -0.21
LSM5-201ENST00000223084 NCOR1O75376 2440 aa13.73□□□□□ -0.21
LSM5-201ENST00000223084 PTPRJQ12913 1337 aa13.72□□□□□ -0.21
LSM5-201ENST00000223084 VCANP13611 3396 aa13.72□□□□□ -0.21
LSM5-201ENST00000223084 ANO9A1A5B4 782 aa13.72□□□□□ -0.21
LSM5-201ENST00000223084 PIRO00625 290 aa13.72□□□□□ -0.21
LSM5-201ENST00000223084 SPTLC1O15269 473 aa13.72□□□□□ -0.21
LSM5-201ENST00000223084 TGM5O43548 720 aa13.72□□□□□ -0.21
LSM5-201ENST00000223084 KINO60870 393 aaKnown RBP13.72□□□□□ -0.21
LSM5-201ENST00000223084 GLUD1P00367 558 aa13.72□□□□□ -0.21
LSM5-201ENST00000223084 WEE2P0C1S8 567 aa13.72□□□□□ -0.21
LSM5-201ENST00000223084 SNRPFP62306 86 aaKnown RBP13.72□□□□□ -0.21
LSM5-201ENST00000223084 SNRNP35Q16560 246 aaKnown RBP13.72□□□□□ -0.21
LSM5-201ENST00000223084 PUS10Q3MIT2 529 aaKnown RBP13.72□□□□□ -0.21
LSM5-201ENST00000223084 VARS2Q5ST30 1063 aaKnown RBP13.72□□□□□ -0.21
LSM5-201ENST00000223084 RARS2Q5T160 578 aaKnown RBP13.72□□□□□ -0.21
LSM5-201ENST00000223084 C12orf56Q8IXR9 622 aa13.72□□□□□ -0.21
LSM5-201ENST00000223084 GPR65Q8IYL9 337 aa13.72□□□□□ -0.21
LSM5-201ENST00000223084 PCDHB8Q9UN66 801 aa13.72□□□□□ -0.21
LSM5-201ENST00000223084 USP15Q9Y4E8 981 aaPredicted RBP13.72□□□□□ -0.21
LSM5-201ENST00000223084 TIMM13Q9Y5L4 95 aaPredicted RBP13.72□□□□□ -0.21
LSM5-201ENST00000223084 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.72□□□□□ -0.21
LSM5-201ENST00000223084 MTCL1Q9Y4B5 1905 aaKnown RBP13.72□□□□□ -0.21
LSM5-201ENST00000223084 SPDYE4A6NLX3 237 aa13.71□□□□□ -0.21
LSM5-201ENST00000223084 M0QZQ0 153 aa13.71□□□□□ -0.21
LSM5-201ENST00000223084 SYN3O14994 580 aa13.71□□□□□ -0.21
LSM5-201ENST00000223084 EXOC3O60645 756 aa13.71□□□□□ -0.21
LSM5-201ENST00000223084 SMC2O95347 1197 aa13.71□□□□□ -0.21
LSM5-201ENST00000223084 OR1D2P34982 312 aa13.71□□□□□ -0.21
LSM5-201ENST00000223084 AARSP49588 968 aaKnown RBP eCLIP13.71□□□□□ -0.21
LSM5-201ENST00000223084 LILRA4P59901 499 aa13.71□□□□□ -0.21
LSM5-201ENST00000223084 UBE2HP62256 183 aa13.71□□□□□ -0.21
LSM5-201ENST00000223084 CREMQ03060 361 aa13.71□□□□□ -0.21
LSM5-201ENST00000223084 CYP24A1Q07973 514 aa13.71□□□□□ -0.21
LSM5-201ENST00000223084 ISM2Q6H9L7 571 aa13.71□□□□□ -0.21
LSM5-201ENST00000223084 TMC5Q6UXY8 1006 aa13.71□□□□□ -0.21
LSM5-201ENST00000223084 DSTYKQ6XUX3 929 aa13.71□□□□□ -0.21
LSM5-201ENST00000223084 ANKS3Q6ZW76 656 aa13.71□□□□□ -0.21
LSM5-201ENST00000223084 C1orf127Q8N9H9 656 aa13.71□□□□□ -0.21
LSM5-201ENST00000223084 OR5B17Q8NGF7 314 aa13.71□□□□□ -0.21
LSM5-201ENST00000223084 CACTINQ8WUQ7 758 aaKnown RBP13.71□□□□□ -0.21
LSM5-201ENST00000223084 SMARCE1Q969G3 411 aa13.71□□□□□ -0.21
LSM5-201ENST00000223084 CCDC127Q96BQ5 260 aa13.71□□□□□ -0.21
LSM5-201ENST00000223084 POP1Q99575 1024 aaKnown RBP13.71□□□□□ -0.21
LSM5-201ENST00000223084 MTMR12Q9C0I1 747 aa13.71□□□□□ -0.21
LSM5-201ENST00000223084 KIAA1586Q9HCI6 787 aa13.71□□□□□ -0.21
LSM5-201ENST00000223084 MAN1C1Q9NR34 630 aa13.71□□□□□ -0.21
LSM5-201ENST00000223084 DMAC2Q9NW81 257 aa13.71□□□□□ -0.21
LSM5-201ENST00000223084 CGNQ9P2M7 1197 aaKnown RBP13.71□□□□□ -0.21
LSM5-201ENST00000223084 MTRRQ9UBK8 725 aa13.71□□□□□ -0.21
LSM5-201ENST00000223084 DOCK6Q96HP0 2047 aa13.7□□□□□ -0.22
LSM5-201ENST00000223084 PDXKO00764 312 aa13.7□□□□□ -0.22
LSM5-201ENST00000223084 NR3C1P04150 777 aa13.7□□□□□ -0.22
LSM5-201ENST00000223084 ITGB3P05106 788 aa13.7□□□□□ -0.22
LSM5-201ENST00000223084 TMEM191BP0C7N4 346 aa13.7□□□□□ -0.22
LSM5-201ENST00000223084 DLATP10515 647 aaKnown RBP13.7□□□□□ -0.22
LSM5-201ENST00000223084 HOXB8P17481 243 aaPredicted RBP13.7□□□□□ -0.22
LSM5-201ENST00000223084 POLR2BP30876 1174 aaKnown RBP13.7□□□□□ -0.22
LSM5-201ENST00000223084 CASP4P49662 377 aa13.7□□□□□ -0.22
LSM5-201ENST00000223084 ARPP19P56211 112 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms