RNA–Protein interactions for RNA: ENST00000221232.9

CNOT3-201, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNOT3, Length 2,852 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-201ENST00000221232 ATF7P17544 494 aaPredicted RBP15.57■□□□□ 0.08
CNOT3-201ENST00000221232 GARTP22102 1010 aa15.57■□□□□ 0.08
CNOT3-201ENST00000221232 TNFSF9P41273 254 aa15.57■□□□□ 0.08
CNOT3-201ENST00000221232 ACTN3Q08043 901 aaPredicted RBP15.57■□□□□ 0.08
CNOT3-201ENST00000221232 ZACNQ401N2 412 aa15.57■□□□□ 0.08
CNOT3-201ENST00000221232 CYP4F22Q6NT55 531 aa15.57■□□□□ 0.08
CNOT3-201ENST00000221232 TMEM174Q8WUU8 243 aa15.57■□□□□ 0.08
CNOT3-201ENST00000221232 ATXN2LQ8WWM7 1075 aaKnown RBP15.57■□□□□ 0.08
CNOT3-201ENST00000221232 DDX27Q96GQ7 796 aaKnown RBP15.57■□□□□ 0.08
CNOT3-201ENST00000221232 DCLK3Q9C098 648 aa15.57■□□□□ 0.08
CNOT3-201ENST00000221232 ZNF302Q9NR11 478 aa15.57■□□□□ 0.08
CNOT3-201ENST00000221232 HAUS2Q9NVX0 235 aa15.57■□□□□ 0.08
CNOT3-201ENST00000221232 TLR3O15455 904 aaKnown RBP15.56■□□□□ 0.08
CNOT3-201ENST00000221232 SRGAP2CP0DJJ0 459 aa15.56■□□□□ 0.08
CNOT3-201ENST00000221232 ATF2P15336 505 aa15.56■□□□□ 0.08
CNOT3-201ENST00000221232 MTM1Q13496 603 aa15.56■□□□□ 0.08
CNOT3-201ENST00000221232 SCYL3Q8IZE3 742 aa15.56■□□□□ 0.08
CNOT3-201ENST00000221232 ANKRD35Q8N283 1001 aa15.56■□□□□ 0.08
CNOT3-201ENST00000221232 ARHGEF2Q92974 986 aaKnown RBP15.56■□□□□ 0.08
CNOT3-201ENST00000221232 GSTTP1A0A1W2PQM5 241 aa15.56■□□□□ 0.08
CNOT3-201ENST00000221232 FSBPO95073 299 aa15.56■□□□□ 0.08
CNOT3-201ENST00000221232 MYCNP04198 464 aaPredicted RBP15.56■□□□□ 0.08
CNOT3-201ENST00000221232 SUPT20HL2P0C7V6 817 aa15.56■□□□□ 0.08
CNOT3-201ENST00000221232 ETS1P14921 441 aa15.56■□□□□ 0.08
CNOT3-201ENST00000221232 GTF2H1P32780 548 aa15.56■□□□□ 0.08
CNOT3-201ENST00000221232 GTF2A1P52655 376 aaPredicted RBP15.56■□□□□ 0.08
CNOT3-201ENST00000221232 MAMLD1Q13495 774 aa15.56■□□□□ 0.08
CNOT3-201ENST00000221232 CUL2Q13617 745 aa15.56■□□□□ 0.08
CNOT3-201ENST00000221232 SUPT20HL1Q3ZLR7 823 aa15.56■□□□□ 0.08
CNOT3-201ENST00000221232 XKR3Q5GH77 459 aa15.56■□□□□ 0.08
CNOT3-201ENST00000221232 SCARA5Q6ZMJ2 495 aa15.56■□□□□ 0.08
CNOT3-201ENST00000221232 GLIS1Q8NBF1 620 aa15.56■□□□□ 0.08
CNOT3-201ENST00000221232 RBBP8NLQ8NC74 664 aaPredicted RBP15.56■□□□□ 0.08
CNOT3-201ENST00000221232 ZBTB10Q96DT7 871 aa15.56■□□□□ 0.08
CNOT3-201ENST00000221232 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.56■□□□□ 0.08
CNOT3-201ENST00000221232 FAM133BQ5BKY9 247 aaKnown RBP15.55■□□□□ 0.08
CNOT3-201ENST00000221232 DALRD3Q5D0E6 543 aaKnown RBP15.55■□□□□ 0.08
CNOT3-201ENST00000221232 ICE2Q659A1 982 aa15.55■□□□□ 0.08
CNOT3-201ENST00000221232 ZNF365Q70YC5 407 aa15.55■□□□□ 0.08
CNOT3-201ENST00000221232 CYP4X1Q8N118 509 aa15.55■□□□□ 0.08
CNOT3-201ENST00000221232 REPS2Q8NFH8 660 aa15.55■□□□□ 0.08
CNOT3-201ENST00000221232 HVCN1Q96D96 273 aa15.55■□□□□ 0.08
CNOT3-201ENST00000221232 SNF8Q96H20 258 aa15.55■□□□□ 0.08
CNOT3-201ENST00000221232 ZNF317Q96PQ6 595 aaPredicted RBP15.55■□□□□ 0.08
CNOT3-201ENST00000221232 C10orf88Q9H8K7 445 aa15.55■□□□□ 0.08
CNOT3-201ENST00000221232 C17orf75Q9HAS0 396 aa15.55■□□□□ 0.08
CNOT3-201ENST00000221232 CD248Q9HCU0 757 aa15.55■□□□□ 0.08
CNOT3-201ENST00000221232 NFKBIEO00221 500 aa15.55■□□□□ 0.08
CNOT3-201ENST00000221232 AGTP01019 485 aa15.55■□□□□ 0.08
CNOT3-201ENST00000221232 PAEPP09466 180 aa15.55■□□□□ 0.08
CNOT3-201ENST00000221232 CHRM1P11229 460 aaPredicted RBP15.55■□□□□ 0.08
CNOT3-201ENST00000221232 PSMD6Q15008 389 aa15.55■□□□□ 0.08
CNOT3-201ENST00000221232 GNPTABQ3T906 1256 aa15.55■□□□□ 0.08
CNOT3-201ENST00000221232 C15orf39Q6ZRI6 1047 aa15.55■□□□□ 0.08
CNOT3-201ENST00000221232 ACAD9Q9H845 621 aa15.55■□□□□ 0.08
CNOT3-201ENST00000221232 PROSCO94903 275 aa15.54■□□□□ 0.08
CNOT3-201ENST00000221232 GH1P01241 217 aa15.54■□□□□ 0.08
CNOT3-201ENST00000221232 WEE2P0C1S8 567 aa15.54■□□□□ 0.08
CNOT3-201ENST00000221232 ACO1P21399 889 aaKnown RBP15.54■□□□□ 0.08
CNOT3-201ENST00000221232 IVDP26440 423 aa15.54■□□□□ 0.08
CNOT3-201ENST00000221232 NOP14P78316 857 aaKnown RBP15.54■□□□□ 0.08
CNOT3-201ENST00000221232 ZKSCAN8Q15776 578 aaPredicted RBP15.54■□□□□ 0.08
CNOT3-201ENST00000221232 ANKRD20A8PQ5CZ79 823 aa15.54■□□□□ 0.08
CNOT3-201ENST00000221232 LIN9Q5TKA1 542 aa15.54■□□□□ 0.08
CNOT3-201ENST00000221232 EP400NLQ6ZTU2 488 aa15.54■□□□□ 0.08
CNOT3-201ENST00000221232 MON1BQ7L1V2 547 aa15.54■□□□□ 0.08
CNOT3-201ENST00000221232 CCDC197Q8NCU1 140 aa15.54■□□□□ 0.08
CNOT3-201ENST00000221232 SLC7A3Q8WY07 619 aa15.54■□□□□ 0.08
CNOT3-201ENST00000221232 PAIP2Q9BPZ3 127 aaKnown RBP15.54■□□□□ 0.08
CNOT3-201ENST00000221232 TEX13BQ9BXU2 312 aa15.54■□□□□ 0.08
CNOT3-201ENST00000221232 OSBPL8Q9BZF1 889 aa15.54■□□□□ 0.08
CNOT3-201ENST00000221232 EFCC1Q9HA90 598 aa15.54■□□□□ 0.08
CNOT3-201ENST00000221232 SLC40A1Q9NP59 571 aa15.54■□□□□ 0.08
CNOT3-201ENST00000221232 TMEM120BA0PK00 339 aa15.54■□□□□ 0.08
CNOT3-201ENST00000221232 SPATA31C2B4DYI2 1134 aa15.54■□□□□ 0.08
CNOT3-201ENST00000221232 GAS8O95995 478 aa15.54■□□□□ 0.08
CNOT3-201ENST00000221232 NCOA4Q13772 614 aa15.54■□□□□ 0.08
CNOT3-201ENST00000221232 CNGA2Q16280 664 aa15.54■□□□□ 0.08
CNOT3-201ENST00000221232 TXNRD3NBQ6F5E7 133 aa15.54■□□□□ 0.08
CNOT3-201ENST00000221232 ABRAQ8N0Z2 381 aa15.54■□□□□ 0.08
CNOT3-201ENST00000221232 CNPY4Q8N129 248 aa15.54■□□□□ 0.08
CNOT3-201ENST00000221232 RDM1Q8NG50 284 aa15.54■□□□□ 0.08
CNOT3-201ENST00000221232 ATL2Q8NHH9 583 aa15.54■□□□□ 0.08
CNOT3-201ENST00000221232 CNKSR2Q8WXI2 1034 aa15.54■□□□□ 0.08
CNOT3-201ENST00000221232 THOC1Q96FV9 657 aaKnown RBP15.54■□□□□ 0.08
CNOT3-201ENST00000221232 SENP7Q9BQF6 1050 aa15.54■□□□□ 0.08
CNOT3-201ENST00000221232 PAGR1Q9BTK6 254 aa15.54■□□□□ 0.08
CNOT3-201ENST00000221232 TCP11X1B4DZS4 312 aa15.54■□□□□ 0.08
CNOT3-201ENST00000221232 MAFGO15525 162 aa15.54■□□□□ 0.08
CNOT3-201ENST00000221232 PIAS1O75925 651 aa15.54■□□□□ 0.08
CNOT3-201ENST00000221232 CYP1A1P04798 512 aaPredicted RBP15.54■□□□□ 0.08
CNOT3-201ENST00000221232 CETPP11597 493 aa15.54■□□□□ 0.08
CNOT3-201ENST00000221232 ITIH2P19823 946 aa15.54■□□□□ 0.08
CNOT3-201ENST00000221232 SCTRP47872 440 aa15.54■□□□□ 0.08
CNOT3-201ENST00000221232 NOMO3P69849 1222 aa15.54■□□□□ 0.08
CNOT3-201ENST00000221232 PLCB3Q01970 1234 aa15.54■□□□□ 0.08
CNOT3-201ENST00000221232 ORC1Q13415 861 aa15.54■□□□□ 0.08
CNOT3-201ENST00000221232 SPDYCQ5MJ68 293 aa15.54■□□□□ 0.08
CNOT3-201ENST00000221232 CYP4A22Q5TCH4 519 aa15.54■□□□□ 0.08
CNOT3-201ENST00000221232 ENOSF1Q7L5Y1 443 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms