RNA–Protein interactions for RNA: ENST00000216294.4

SNAPC1-201, Transcript of small nuclear RNA activating complex polypeptide 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNAPC1, Length 2,656 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC1-201ENST00000216294 GTF2BQ00403 316 aa16.85■□□□□ 0.29
SNAPC1-201ENST00000216294 TMED2Q15363 201 aa16.85■□□□□ 0.29
SNAPC1-201ENST00000216294 ZNF568Q3ZCX4 644 aa16.85■□□□□ 0.29
SNAPC1-201ENST00000216294 TMEM63BQ5T3F8 832 aa16.85■□□□□ 0.29
SNAPC1-201ENST00000216294 ZFYVE27Q5T4F4 411 aa16.85■□□□□ 0.29
SNAPC1-201ENST00000216294 KRT39Q6A163 491 aa16.85■□□□□ 0.29
SNAPC1-201ENST00000216294 RHBDF2Q6PJF5 856 aa16.85■□□□□ 0.29
SNAPC1-201ENST00000216294 ZNF516Q92618 1163 aa16.85■□□□□ 0.29
SNAPC1-201ENST00000216294 LBHD1Q9BQE6 289 aaPredicted RBP16.85■□□□□ 0.29
SNAPC1-201ENST00000216294 AGO4Q9HCK5 861 aaKnown RBP16.85■□□□□ 0.29
SNAPC1-201ENST00000216294 ZBED4O75132 1171 aa16.84■□□□□ 0.29
SNAPC1-201ENST00000216294 UPP2O95045 317 aa16.84■□□□□ 0.29
SNAPC1-201ENST00000216294 TTC4O95801 387 aa16.84■□□□□ 0.29
SNAPC1-201ENST00000216294 SPDYCQ5MJ68 293 aa16.84■□□□□ 0.29
SNAPC1-201ENST00000216294 ANO5Q75V66 913 aa16.84■□□□□ 0.29
SNAPC1-201ENST00000216294 CYFIP1Q7L576 1253 aa16.84■□□□□ 0.29
SNAPC1-201ENST00000216294 TAOK1Q7L7X3 1001 aa16.84■□□□□ 0.29
SNAPC1-201ENST00000216294 KCNV2Q8TDN2 545 aa16.84■□□□□ 0.29
SNAPC1-201ENST00000216294 NT5C1BQ96P26 610 aa16.84■□□□□ 0.29
SNAPC1-201ENST00000216294 FHDC1Q9C0D6 1143 aaPredicted RBP16.84■□□□□ 0.29
SNAPC1-201ENST00000216294 C12orf65Q9H3J6 166 aaKnown RBP16.84■□□□□ 0.29
SNAPC1-201ENST00000216294 SLCO1B3Q9NPD5 702 aa16.84■□□□□ 0.29
SNAPC1-201ENST00000216294 A1CFQ9NQ94 594 aaKnown RBP16.84■□□□□ 0.29
SNAPC1-201ENST00000216294 PARP2Q9UGN5 583 aa16.84■□□□□ 0.29
SNAPC1-201ENST00000216294 FSCN2O14926 492 aa16.84■□□□□ 0.29
SNAPC1-201ENST00000216294 ACOT2P49753 483 aa16.84■□□□□ 0.29
SNAPC1-201ENST00000216294 ITIH4Q14624 930 aa16.84■□□□□ 0.29
SNAPC1-201ENST00000216294 TMEM161BQ8NDZ6 487 aa16.84■□□□□ 0.29
SNAPC1-201ENST00000216294 FBXL13Q8NEE6 735 aa16.84■□□□□ 0.29
SNAPC1-201ENST00000216294 DCLK3Q9C098 648 aa16.84■□□□□ 0.29
SNAPC1-201ENST00000216294 SSC5DA1L4H1 1573 aa16.84■□□□□ 0.29
SNAPC1-201ENST00000216294 MYH9P35579 1960 aaKnown RBP16.84■□□□□ 0.29
SNAPC1-201ENST00000216294 PTPRJQ12913 1337 aa16.84■□□□□ 0.29
SNAPC1-201ENST00000216294 GSTTP1A0A1W2PQM5 241 aa16.83■□□□□ 0.29
SNAPC1-201ENST00000216294 POC1B-GALNT4F8VUJ3 575 aa16.83■□□□□ 0.29
SNAPC1-201ENST00000216294 OAS1P00973 400 aaKnown RBP16.83■□□□□ 0.29
SNAPC1-201ENST00000216294 HSPA6P17066 643 aa16.83■□□□□ 0.29
SNAPC1-201ENST00000216294 STX2P32856 288 aa16.83■□□□□ 0.29
SNAPC1-201ENST00000216294 CLEC16AQ2KHT3 1053 aa16.83■□□□□ 0.29
SNAPC1-201ENST00000216294 SNF8Q96H20 258 aa16.83■□□□□ 0.29
SNAPC1-201ENST00000216294 DOCK1Q14185 1865 aa16.83■□□□□ 0.29
SNAPC1-201ENST00000216294 GOLGA8SH3BPF8 625 aa16.83■□□□□ 0.28
SNAPC1-201ENST00000216294 GOLGA8MH3BSY2 632 aa16.83■□□□□ 0.28
SNAPC1-201ENST00000216294 EZRP15311 586 aaKnown RBP16.83■□□□□ 0.28
SNAPC1-201ENST00000216294 ATF2P15336 505 aa16.83■□□□□ 0.28
SNAPC1-201ENST00000216294 NQO1P15559 274 aaKnown RBP16.83■□□□□ 0.28
SNAPC1-201ENST00000216294 DSG3P32926 999 aa16.83■□□□□ 0.28
SNAPC1-201ENST00000216294 MCOLN2Q8IZK6 566 aa16.83■□□□□ 0.28
SNAPC1-201ENST00000216294 C4orf33Q8N1A6 199 aa16.83■□□□□ 0.28
SNAPC1-201ENST00000216294 NSMCE1Q8WV22 266 aa16.83■□□□□ 0.28
SNAPC1-201ENST00000216294 TMEM237Q96Q45 408 aa16.83■□□□□ 0.28
SNAPC1-201ENST00000216294 RIT2Q99578 217 aa16.83■□□□□ 0.28
SNAPC1-201ENST00000216294 AS3MTQ9HBK9 375 aa16.83■□□□□ 0.28
SNAPC1-201ENST00000216294 HOMER3Q9NSC5 361 aa16.83■□□□□ 0.28
SNAPC1-201ENST00000216294 KCND2Q9NZV8 630 aa16.83■□□□□ 0.28
SNAPC1-201ENST00000216294 ANP32DO95626 131 aa16.83■□□□□ 0.28
SNAPC1-201ENST00000216294 GHRHRQ02643 423 aa16.83■□□□□ 0.28
SNAPC1-201ENST00000216294 PGM5Q15124 567 aa16.83■□□□□ 0.28
SNAPC1-201ENST00000216294 ZBTB41Q5SVQ8 909 aa16.83■□□□□ 0.28
SNAPC1-201ENST00000216294 PCNX4Q63HM2 1172 aa16.83■□□□□ 0.28
SNAPC1-201ENST00000216294 GSTA5Q7RTV2 222 aa16.83■□□□□ 0.28
SNAPC1-201ENST00000216294 SPATA21Q7Z572 469 aa16.83■□□□□ 0.28
SNAPC1-201ENST00000216294 KLHL29Q96CT2 875 aa16.83■□□□□ 0.28
SNAPC1-201ENST00000216294 KLRG1Q96E93 195 aa16.83■□□□□ 0.28
SNAPC1-201ENST00000216294 DDX27Q96GQ7 796 aaKnown RBP16.83■□□□□ 0.28
SNAPC1-201ENST00000216294 RNF146Q9NTX7 359 aa16.83■□□□□ 0.28
SNAPC1-201ENST00000216294 UBIAD1Q9Y5Z9 338 aa16.83■□□□□ 0.28
SNAPC1-201ENST00000216294 UMODL1Q5DID0 1318 aa16.82■□□□□ 0.28
SNAPC1-201ENST00000216294 HNRNPDLO14979 420 aaKnown RBP16.82■□□□□ 0.28
SNAPC1-201ENST00000216294 MTA2O94776 668 aa16.82■□□□□ 0.28
SNAPC1-201ENST00000216294 RFX1P22670 979 aa16.82■□□□□ 0.28
SNAPC1-201ENST00000216294 GBP2P32456 591 aaPredicted RBP16.82■□□□□ 0.28
SNAPC1-201ENST00000216294 GAD2Q05329 585 aa16.82■□□□□ 0.28
SNAPC1-201ENST00000216294 DNAJC3Q13217 504 aa16.82■□□□□ 0.28
SNAPC1-201ENST00000216294 IZUMO3Q5VZ72 239 aa16.82■□□□□ 0.28
SNAPC1-201ENST00000216294 MFSD5Q6N075 450 aa16.82■□□□□ 0.28
SNAPC1-201ENST00000216294 ERICH1Q86X53 443 aa16.82■□□□□ 0.28
SNAPC1-201ENST00000216294 GPC2Q8N158 579 aa16.82■□□□□ 0.28
SNAPC1-201ENST00000216294 BICD1Q96G01 975 aa16.82■□□□□ 0.28
SNAPC1-201ENST00000216294 ZBTB45Q96K62 511 aaPredicted RBP16.82■□□□□ 0.28
SNAPC1-201ENST00000216294 RMDN3Q96TC7 470 aa16.82■□□□□ 0.28
SNAPC1-201ENST00000216294 KMT5AQ9NQR1 393 aa16.82■□□□□ 0.28
SNAPC1-201ENST00000216294 SAE1Q9UBE0 346 aaPredicted RBP16.82■□□□□ 0.28
SNAPC1-201ENST00000216294 TCEAL9Q9UHQ7 104 aa16.82■□□□□ 0.28
SNAPC1-201ENST00000216294 MYPNQ86TC9 1320 aa16.82■□□□□ 0.28
SNAPC1-201ENST00000216294 GGPS1O95749 300 aa16.82■□□□□ 0.28
SNAPC1-201ENST00000216294 FDX1P10109 184 aa16.82■□□□□ 0.28
SNAPC1-201ENST00000216294 CLNS1AP54105 237 aaKnown RBP16.82■□□□□ 0.28
SNAPC1-201ENST00000216294 P3H1Q32P28 736 aa16.82■□□□□ 0.28
SNAPC1-201ENST00000216294 TXNRD3NBQ6F5E7 133 aa16.82■□□□□ 0.28
SNAPC1-201ENST00000216294 TRMT10CQ7L0Y3 403 aaKnown RBP16.82■□□□□ 0.28
SNAPC1-201ENST00000216294 ECHDC2Q86YB7 292 aa16.82■□□□□ 0.28
SNAPC1-201ENST00000216294 TMEM109Q9BVC6 243 aa16.82■□□□□ 0.28
SNAPC1-201ENST00000216294 GRID1Q9ULK0 1009 aa16.82■□□□□ 0.28
SNAPC1-201ENST00000216294 HARSP12081 509 aaKnown RBP16.81■□□□□ 0.28
SNAPC1-201ENST00000216294 WDR4P57081 412 aaKnown RBP16.81■□□□□ 0.28
SNAPC1-201ENST00000216294 RPL7AP62424 266 aaKnown RBP16.81■□□□□ 0.28
SNAPC1-201ENST00000216294 BAATQ14032 418 aaPredicted RBP16.81■□□□□ 0.28
SNAPC1-201ENST00000216294 NAA25Q14CX7 972 aa16.81■□□□□ 0.28
SNAPC1-201ENST00000216294 SNRNP48Q6IEG0 339 aaKnown RBP16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms