RNA–Protein interactions for RNA: ENST00000211998.9

VCL-201, Transcript of vinculin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VCL, Length 5,490 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-201ENST00000211998 ADRA2BP18089 450 aa10.96□□□□□ -0.66
VCL-201ENST00000211998 NFKBIAP25963 317 aa10.96□□□□□ -0.66
VCL-201ENST00000211998 NLRP11P59045 1033 aaKnown RBP10.96□□□□□ -0.66
VCL-201ENST00000211998 PPP6R3Q5H9R7 873 aaPredicted RBP10.96□□□□□ -0.66
VCL-201ENST00000211998 PODNQ7Z5L7 613 aa10.96□□□□□ -0.66
VCL-201ENST00000211998 CDH24Q86UP0 819 aa10.96□□□□□ -0.66
VCL-201ENST00000211998 ARID3BQ8IVW6 561 aaPredicted RBP10.96□□□□□ -0.66
VCL-201ENST00000211998 GUF1Q8N442 669 aaKnown RBP10.96□□□□□ -0.66
VCL-201ENST00000211998 CNDP1Q96KN2 507 aa10.96□□□□□ -0.66
VCL-201ENST00000211998 MSTO1Q9BUK6 570 aa10.96□□□□□ -0.66
VCL-201ENST00000211998 PPCSQ9HAB8 311 aa10.96□□□□□ -0.66
VCL-201ENST00000211998 SRP72O76094 671 aaKnown RBP10.95□□□□□ -0.66
VCL-201ENST00000211998 CDC27P30260 824 aa10.95□□□□□ -0.66
VCL-201ENST00000211998 GALCP54803 685 aa10.95□□□□□ -0.66
VCL-201ENST00000211998 GLMNQ92990 594 aa10.95□□□□□ -0.66
VCL-201ENST00000211998 E2F7Q96AV8 911 aa10.95□□□□□ -0.66
VCL-201ENST00000211998 ZFRQ96KR1 1074 aaKnown RBP10.95□□□□□ -0.66
VCL-201ENST00000211998 ADGRA3Q8IWK6 1321 aa10.95□□□□□ -0.66
VCL-201ENST00000211998 LINC00854A0A1B0GVQ3 168 aa10.95□□□□□ -0.66
VCL-201ENST00000211998 PP2D1A8MPX8 630 aa10.95□□□□□ -0.66
VCL-201ENST00000211998 K7ERI5 159 aa10.95□□□□□ -0.66
VCL-201ENST00000211998 TRIM49P0CI25 452 aa10.95□□□□□ -0.66
VCL-201ENST00000211998 TRIM49CP0CI26 452 aa10.95□□□□□ -0.66
VCL-201ENST00000211998 GCLMP48507 274 aa10.95□□□□□ -0.66
VCL-201ENST00000211998 ITGA8P53708 1063 aa10.95□□□□□ -0.66
VCL-201ENST00000211998 TNFAIP2Q03169 654 aa10.95□□□□□ -0.66
VCL-201ENST00000211998 DPYDQ12882 1025 aa10.95□□□□□ -0.66
VCL-201ENST00000211998 TRIM65Q6PJ69 517 aa10.95□□□□□ -0.66
VCL-201ENST00000211998 CRELD2Q6UXH1 353 aaPredicted RBP10.95□□□□□ -0.66
VCL-201ENST00000211998 ZBTB33Q86T24 672 aa10.95□□□□□ -0.66
VCL-201ENST00000211998 MCPH1Q8NEM0 835 aa10.95□□□□□ -0.66
VCL-201ENST00000211998 RNF139Q8WU17 664 aa10.95□□□□□ -0.66
VCL-201ENST00000211998 EXOSC4Q9NPD3 245 aaKnown RBP10.95□□□□□ -0.66
VCL-201ENST00000211998 DMAP1Q9NPF5 467 aaPredicted RBP10.95□□□□□ -0.66
VCL-201ENST00000211998 TUBA8Q9NY65 449 aaPredicted RBP10.95□□□□□ -0.66
VCL-201ENST00000211998 FEM1BQ9UK73 627 aa10.95□□□□□ -0.66
VCL-201ENST00000211998 SLC8A2Q9UPR5 921 aa10.95□□□□□ -0.66
VCL-201ENST00000211998 MAP3K4Q9Y6R4 1608 aa10.95□□□□□ -0.66
VCL-201ENST00000211998 SLC4A1P02730 911 aa10.95□□□□□ -0.66
VCL-201ENST00000211998 ALBP02768 609 aa10.95□□□□□ -0.66
VCL-201ENST00000211998 YY1P25490 414 aa10.95□□□□□ -0.66
VCL-201ENST00000211998 CIITAP33076 1130 aa10.95□□□□□ -0.66
VCL-201ENST00000211998 KLK7P49862 253 aa10.95□□□□□ -0.66
VCL-201ENST00000211998 PTK7Q13308 1070 aa10.95□□□□□ -0.66
VCL-201ENST00000211998 CYB5R4Q7L1T6 521 aa10.95□□□□□ -0.66
VCL-201ENST00000211998 DDIASQ8IXT1 998 aa10.95□□□□□ -0.66
VCL-201ENST00000211998 SEPT12Q8IYM1 358 aa10.95□□□□□ -0.66
VCL-201ENST00000211998 ANKS1AQ92625 1134 aa10.95□□□□□ -0.66
VCL-201ENST00000211998 SLC10A4Q96EP9 437 aa10.95□□□□□ -0.66
VCL-201ENST00000211998 SCN3BQ9NY72 215 aa10.95□□□□□ -0.66
VCL-201ENST00000211998 F5H423 210 aaPredicted RBP10.95□□□□□ -0.66
VCL-201ENST00000211998 OPLAHO14841 1288 aa10.95□□□□□ -0.66
VCL-201ENST00000211998 HNRNPRO43390 633 aaKnown RBP10.95□□□□□ -0.66
VCL-201ENST00000211998 RGS2P41220 211 aa10.95□□□□□ -0.66
VCL-201ENST00000211998 ITGB3BPQ13352 177 aaPredicted RBP10.95□□□□□ -0.66
VCL-201ENST00000211998 CHI3L2Q15782 390 aa10.95□□□□□ -0.66
VCL-201ENST00000211998 IFNEQ86WN2 208 aa10.95□□□□□ -0.66
VCL-201ENST00000211998 CAPSLQ8WWF8 208 aa10.95□□□□□ -0.66
VCL-201ENST00000211998 TMEM237Q96Q45 408 aa10.95□□□□□ -0.66
VCL-201ENST00000211998 ZNF341Q9BYN7 854 aa10.95□□□□□ -0.66
VCL-201ENST00000211998 BHMT2Q9H2M3 363 aa10.95□□□□□ -0.66
VCL-201ENST00000211998 PCMTD2Q9NV79 361 aa10.95□□□□□ -0.66
VCL-201ENST00000211998 ATXN10Q9UBB4 475 aa10.95□□□□□ -0.66
VCL-201ENST00000211998 DKK3Q9UBP4 350 aa10.95□□□□□ -0.66
VCL-201ENST00000211998 SRP68Q9UHB9 627 aaKnown RBP10.95□□□□□ -0.66
VCL-201ENST00000211998 ZBTB5O15062 677 aa10.95□□□□□ -0.66
VCL-201ENST00000211998 EIF2AK2P19525 551 aaKnown RBP10.95□□□□□ -0.66
VCL-201ENST00000211998 BLVRAP53004 296 aa10.95□□□□□ -0.66
VCL-201ENST00000211998 ROR1Q01973 937 aa10.95□□□□□ -0.66
VCL-201ENST00000211998 DDR1Q08345 913 aa10.95□□□□□ -0.66
VCL-201ENST00000211998 FASTKD1Q53R41 847 aaKnown RBP10.95□□□□□ -0.66
VCL-201ENST00000211998 ADSSL1Q8N142 457 aa10.95□□□□□ -0.66
VCL-201ENST00000211998 C7orf31Q8N865 590 aa10.95□□□□□ -0.66
VCL-201ENST00000211998 GCNAQ96QF7 691 aa10.95□□□□□ -0.66
VCL-201ENST00000211998 EURLQ9NYK6 297 aa10.95□□□□□ -0.66
VCL-201ENST00000211998 NARFQ9UHQ1 456 aa10.95□□□□□ -0.66
VCL-201ENST00000211998 POTEMA6NI47 508 aa10.94□□□□□ -0.66
VCL-201ENST00000211998 KLRC1P26715 233 aa10.94□□□□□ -0.66
VCL-201ENST00000211998 SOX11P35716 441 aa10.94□□□□□ -0.66
VCL-201ENST00000211998 PPARGP37231 505 aaPredicted RBP10.94□□□□□ -0.66
VCL-201ENST00000211998 NUDT2P50583 147 aa10.94□□□□□ -0.66
VCL-201ENST00000211998 KRT76Q01546 638 aa10.94□□□□□ -0.66
VCL-201ENST00000211998 TJAP1Q5JTD0 557 aa10.94□□□□□ -0.66
VCL-201ENST00000211998 EZH1Q92800 747 aaPredicted RBP10.94□□□□□ -0.66
VCL-201ENST00000211998 ATXN7L3BQ96GX2 97 aa10.94□□□□□ -0.66
VCL-201ENST00000211998 HEXIM2Q96MH2 286 aaKnown RBP10.94□□□□□ -0.66
VCL-201ENST00000211998 GOLPH3Q9H4A6 298 aa10.94□□□□□ -0.66
VCL-201ENST00000211998 USP1O94782 785 aa10.94□□□□□ -0.66
VCL-201ENST00000211998 BCL10O95999 233 aa10.94□□□□□ -0.66
VCL-201ENST00000211998 KRT7P08729 469 aa10.94□□□□□ -0.66
VCL-201ENST00000211998 EPHB2P29323 1055 aa10.94□□□□□ -0.66
VCL-201ENST00000211998 PMLP29590 882 aa10.94□□□□□ -0.66
VCL-201ENST00000211998 MCAMP43121 646 aa10.94□□□□□ -0.66
VCL-201ENST00000211998 ZNF200P98182 395 aaPredicted RBP10.94□□□□□ -0.66
VCL-201ENST00000211998 WASHC5Q12768 1159 aa10.94□□□□□ -0.66
VCL-201ENST00000211998 TXNRD1Q16881 649 aa10.94□□□□□ -0.66
VCL-201ENST00000211998 TRIM74Q86UV6 250 aa10.94□□□□□ -0.66
VCL-201ENST00000211998 TRIM73Q86UV7 250 aa10.94□□□□□ -0.66
VCL-201ENST00000211998 LRRC6Q86X45 466 aa10.94□□□□□ -0.66
VCL-201ENST00000211998 AGPAT1Q99943 283 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms