RNA–Protein interactions for RNA: ENST00000162749.6

TNFRSF1A-201, Transcript of TNF receptor superfamily member 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1A, Length 2,223 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-201ENST00000162749 INHAP05111 366 aa21.1■□□□□ 0.97
TNFRSF1A-201ENST00000162749 GALCP54803 685 aa21.1■□□□□ 0.97
TNFRSF1A-201ENST00000162749 MRPS6P82932 125 aaKnown RBP21.1■□□□□ 0.97
TNFRSF1A-201ENST00000162749 FMO1Q01740 532 aa21.1■□□□□ 0.97
TNFRSF1A-201ENST00000162749 APBB1IPQ7Z5R6 666 aaPredicted RBP21.1■□□□□ 0.97
TNFRSF1A-201ENST00000162749 RNF180Q86T96 592 aa21.1■□□□□ 0.97
TNFRSF1A-201ENST00000162749 TMEM130Q8N3G9 435 aa21.1■□□□□ 0.97
TNFRSF1A-201ENST00000162749 GOLGA1Q92805 767 aa21.1■□□□□ 0.97
TNFRSF1A-201ENST00000162749 SAGE1Q9NXZ1 904 aa21.1■□□□□ 0.97
TNFRSF1A-201ENST00000162749 PUF60Q9UHX1 559 aaKnown RBP21.1■□□□□ 0.97
TNFRSF1A-201ENST00000162749 HES2Q9Y543 173 aa21.1■□□□□ 0.97
TNFRSF1A-201ENST00000162749 ATP1A1P05023 1023 aaKnown RBP21.09■□□□□ 0.97
TNFRSF1A-201ENST00000162749 MMEP08473 750 aa21.09■□□□□ 0.97
TNFRSF1A-201ENST00000162749 AMPD2Q01433 879 aa21.09■□□□□ 0.97
TNFRSF1A-201ENST00000162749 TUBB2AQ13885 445 aa21.09■□□□□ 0.97
TNFRSF1A-201ENST00000162749 ZNF699Q32M78 642 aa21.09■□□□□ 0.97
TNFRSF1A-201ENST00000162749 CXorf38Q8TB03 319 aa21.09■□□□□ 0.97
TNFRSF1A-201ENST00000162749 ALS2CR12Q96Q35 445 aa21.09■□□□□ 0.97
TNFRSF1A-201ENST00000162749 PCDHB18PQ96TA0 734 aa21.09■□□□□ 0.97
TNFRSF1A-201ENST00000162749 TUBB2BQ9BVA1 445 aa21.09■□□□□ 0.97
TNFRSF1A-201ENST00000162749 PRDM10Q9NQV6 1147 aa21.09■□□□□ 0.97
TNFRSF1A-201ENST00000162749 SNTG2Q9NY99 539 aa21.09■□□□□ 0.97
TNFRSF1A-201ENST00000162749 C2CD2Q9Y426 696 aa21.09■□□□□ 0.97
TNFRSF1A-201ENST00000162749 ANO9A1A5B4 782 aa21.09■□□□□ 0.97
TNFRSF1A-201ENST00000162749 CDR2Q01850 454 aa21.09■□□□□ 0.97
TNFRSF1A-201ENST00000162749 TMEM132DQ14C87 1099 aa21.09■□□□□ 0.97
TNFRSF1A-201ENST00000162749 TRIM6Q9C030 488 aaPredicted RBP21.09■□□□□ 0.97
TNFRSF1A-201ENST00000162749 NIF3L1Q9GZT8 377 aa21.09■□□□□ 0.97
TNFRSF1A-201ENST00000162749 NXF3Q9H4D5 531 aaKnown RBP21.09■□□□□ 0.97
TNFRSF1A-201ENST00000162749 CNTN6Q9UQ52 1028 aa21.09■□□□□ 0.97
TNFRSF1A-201ENST00000162749 CDY2AQ9Y6F7 541 aa21.09■□□□□ 0.97
TNFRSF1A-201ENST00000162749 ITGB3P05106 788 aa21.08■□□□□ 0.97
TNFRSF1A-201ENST00000162749 KRT19P08727 400 aa21.08■□□□□ 0.97
TNFRSF1A-201ENST00000162749 NAP1L1P55209 391 aaKnown RBP21.08■□□□□ 0.97
TNFRSF1A-201ENST00000162749 TMEM270Q6UE05 265 aa21.08■□□□□ 0.97
TNFRSF1A-201ENST00000162749 FAM228AQ86W67 206 aa21.08■□□□□ 0.97
TNFRSF1A-201ENST00000162749 SLAIN1Q8ND83 568 aa21.08■□□□□ 0.97
TNFRSF1A-201ENST00000162749 PARD6BQ9BYG5 372 aa21.08■□□□□ 0.97
TNFRSF1A-201ENST00000162749 CXCL16Q9H2A7 254 aa21.08■□□□□ 0.97
TNFRSF1A-201ENST00000162749 ARGLU1Q9NWB6 273 aaPredicted RBP21.08■□□□□ 0.97
TNFRSF1A-201ENST00000162749 PCDHB2Q9Y5E7 798 aa21.08■□□□□ 0.97
TNFRSF1A-201ENST00000162749 FAM170AA1A519 330 aa21.08■□□□□ 0.96
TNFRSF1A-201ENST00000162749 M0QZ92 97 aa21.08■□□□□ 0.96
TNFRSF1A-201ENST00000162749 CALCAP01258 141 aa21.08■□□□□ 0.96
TNFRSF1A-201ENST00000162749 RSPH3Q86UC2 560 aa21.08■□□□□ 0.96
TNFRSF1A-201ENST00000162749 UBR7Q8N806 425 aa21.08■□□□□ 0.96
TNFRSF1A-201ENST00000162749 CEP112Q8N8E3 955 aa21.08■□□□□ 0.96
TNFRSF1A-201ENST00000162749 NOC2LQ9Y3T9 749 aaKnown RBP21.08■□□□□ 0.96
TNFRSF1A-201ENST00000162749 JRKLQ9Y4A0 524 aa21.08■□□□□ 0.96
TNFRSF1A-201ENST00000162749 PCDHB4Q9Y5E5 795 aa21.08■□□□□ 0.96
TNFRSF1A-201ENST00000162749 PCDHGC5Q9Y5F6 944 aa21.08■□□□□ 0.96
TNFRSF1A-201ENST00000162749 ABCB4P21439 1286 aa21.07■□□□□ 0.96
TNFRSF1A-201ENST00000162749 ASPAP45381 313 aa21.07■□□□□ 0.96
TNFRSF1A-201ENST00000162749 ACLYP53396 1101 aa21.07■□□□□ 0.96
TNFRSF1A-201ENST00000162749 ARHGEF6Q15052 776 aa21.07■□□□□ 0.96
TNFRSF1A-201ENST00000162749 PAPD7Q5XG87 772 aaKnown RBP21.07■□□□□ 0.96
TNFRSF1A-201ENST00000162749 RPAINQ86UA6 219 aa21.07■□□□□ 0.96
TNFRSF1A-201ENST00000162749 NT5DC4Q86YG4 428 aa21.07■□□□□ 0.96
TNFRSF1A-201ENST00000162749 CD302Q8IX05 232 aa21.07■□□□□ 0.96
TNFRSF1A-201ENST00000162749 SNX27Q96L92 541 aa21.07■□□□□ 0.96
TNFRSF1A-201ENST00000162749 ISCUQ9H1K1 167 aa21.07■□□□□ 0.96
TNFRSF1A-201ENST00000162749 PLEKHA5Q9HAU0 1116 aa21.07■□□□□ 0.96
TNFRSF1A-201ENST00000162749 TRPV2Q9Y5S1 764 aa21.07■□□□□ 0.96
TNFRSF1A-201ENST00000162749 CTSHP09668 335 aa21.06■□□□□ 0.96
TNFRSF1A-201ENST00000162749 GZMAP12544 262 aa21.06■□□□□ 0.96
TNFRSF1A-201ENST00000162749 GRK4P32298 578 aa21.06■□□□□ 0.96
TNFRSF1A-201ENST00000162749 PTGISQ16647 500 aa21.06■□□□□ 0.96
TNFRSF1A-201ENST00000162749 LHX8Q68G74 356 aa21.06■□□□□ 0.96
TNFRSF1A-201ENST00000162749 TMCO3Q6UWJ1 677 aa21.06■□□□□ 0.96
TNFRSF1A-201ENST00000162749 KRT222Q8N1A0 295 aa21.06■□□□□ 0.96
TNFRSF1A-201ENST00000162749 SENP6Q9GZR1 1112 aaPredicted RBP21.06■□□□□ 0.96
TNFRSF1A-201ENST00000162749 A0A0A6YYK5 440 aaPredicted RBP21.06■□□□□ 0.96
TNFRSF1A-201ENST00000162749 ANKRD62A6NC57 917 aa21.06■□□□□ 0.96
TNFRSF1A-201ENST00000162749 SEC31AO94979 1220 aaKnown RBP21.06■□□□□ 0.96
TNFRSF1A-201ENST00000162749 CHRNA1P02708 482 aa21.06■□□□□ 0.96
TNFRSF1A-201ENST00000162749 TMEM253P0C7T8 217 aa21.06■□□□□ 0.96
TNFRSF1A-201ENST00000162749 BPIFB4P59827 614 aa21.06■□□□□ 0.96
TNFRSF1A-201ENST00000162749 UBXN11Q5T124 520 aa21.06■□□□□ 0.96
TNFRSF1A-201ENST00000162749 CTNNBL1Q8WYA6 563 aaPredicted RBP21.06■□□□□ 0.96
TNFRSF1A-201ENST00000162749 TAF4BQ92750 862 aa21.06■□□□□ 0.96
TNFRSF1A-201ENST00000162749 ZMAT2Q96NC0 199 aaKnown RBP21.06■□□□□ 0.96
TNFRSF1A-201ENST00000162749 HMX1Q9NP08 348 aaPredicted RBP21.06■□□□□ 0.96
TNFRSF1A-201ENST00000162749 PALMO75781 387 aa21.05■□□□□ 0.96
TNFRSF1A-201ENST00000162749 RECQL4O94761 1208 aa21.05■□□□□ 0.96
TNFRSF1A-201ENST00000162749 GUCY2FP51841 1108 aa21.05■□□□□ 0.96
TNFRSF1A-201ENST00000162749 ZNF132P52740 706 aa21.05■□□□□ 0.96
TNFRSF1A-201ENST00000162749 PRMT2P55345 433 aa21.05■□□□□ 0.96
TNFRSF1A-201ENST00000162749 ITGA7Q13683 1181 aa21.05■□□□□ 0.96
TNFRSF1A-201ENST00000162749 RBBP8NLQ8NC74 664 aaPredicted RBP21.05■□□□□ 0.96
TNFRSF1A-201ENST00000162749 KIF12Q96FN5 646 aa21.05■□□□□ 0.96
TNFRSF1A-201ENST00000162749 THAP2Q9H0W7 228 aa21.05■□□□□ 0.96
TNFRSF1A-201ENST00000162749 TSKSQ9UJT2 592 aa21.05■□□□□ 0.96
TNFRSF1A-201ENST00000162749 RTN2O75298 545 aa21.05■□□□□ 0.96
TNFRSF1A-201ENST00000162749 CABYRO75952 493 aa21.05■□□□□ 0.96
TNFRSF1A-201ENST00000162749 FTLP02792 175 aaPredicted RBP21.05■□□□□ 0.96
TNFRSF1A-201ENST00000162749 RPLP2P05387 115 aaKnown RBP21.05■□□□□ 0.96
TNFRSF1A-201ENST00000162749 YARSP54577 528 aaKnown RBP21.05■□□□□ 0.96
TNFRSF1A-201ENST00000162749 WDR72Q3MJ13 1102 aa21.05■□□□□ 0.96
TNFRSF1A-201ENST00000162749 ALKAL1Q6UXT8 129 aa21.05■□□□□ 0.96
TNFRSF1A-201ENST00000162749 SCARA5Q6ZMJ2 495 aa21.05■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms