RNA–Protein interactions for RNA: ENST00000081029.7

MRPS35-201, Transcript of mitochondrial ribosomal protein S35, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPS35, Length 1,888 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS35-201ENST00000081029 TAS1R1Q7RTX1 841 aa11.44□□□□□ -0.58
MRPS35-201ENST00000081029 DDX53Q86TM3 631 aaKnown RBP11.44□□□□□ -0.58
MRPS35-201ENST00000081029 ZSCAN30Q86W11 494 aa11.44□□□□□ -0.58
MRPS35-201ENST00000081029 CD302Q8IX05 232 aa11.44□□□□□ -0.58
MRPS35-201ENST00000081029 GOLGA5Q8TBA6 731 aa11.44□□□□□ -0.58
MRPS35-201ENST00000081029 MARCH5Q9NX47 278 aa11.44□□□□□ -0.58
MRPS35-201ENST00000081029 IMPACTQ9P2X3 320 aa11.44□□□□□ -0.58
MRPS35-201ENST00000081029 ADAM28Q9UKQ2 775 aa11.44□□□□□ -0.58
MRPS35-201ENST00000081029 NUB1Q9Y5A7 615 aa11.44□□□□□ -0.58
MRPS35-201ENST00000081029 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.44□□□□□ -0.58
MRPS35-201ENST00000081029 CARNS1A5YM72 827 aa11.43□□□□□ -0.58
MRPS35-201ENST00000081029 ESPNB1AK53 854 aa11.43□□□□□ -0.58
MRPS35-201ENST00000081029 I3L4J1 428 aa11.43□□□□□ -0.58
MRPS35-201ENST00000081029 PODXLO00592 558 aa11.43□□□□□ -0.58
MRPS35-201ENST00000081029 PDXKO00764 312 aa11.43□□□□□ -0.58
MRPS35-201ENST00000081029 KIAA0391O15091 583 aaKnown RBP11.43□□□□□ -0.58
MRPS35-201ENST00000081029 NR3C1P04150 777 aa11.43□□□□□ -0.58
MRPS35-201ENST00000081029 DLATP10515 647 aaKnown RBP11.43□□□□□ -0.58
MRPS35-201ENST00000081029 WNT7BP56706 349 aa11.43□□□□□ -0.58
MRPS35-201ENST00000081029 SNRPFP62306 86 aaKnown RBP11.43□□□□□ -0.58
MRPS35-201ENST00000081029 UBE3AQ05086 875 aa11.43□□□□□ -0.58
MRPS35-201ENST00000081029 UPP1Q16831 310 aa11.43□□□□□ -0.58
MRPS35-201ENST00000081029 LMBRD2Q68DH5 695 aaPredicted RBP11.43□□□□□ -0.58
MRPS35-201ENST00000081029 DCLRE1AQ6PJP8 1040 aa11.43□□□□□ -0.58
MRPS35-201ENST00000081029 FOXR2Q6PJQ5 311 aa11.43□□□□□ -0.58
MRPS35-201ENST00000081029 TMC6Q7Z403 805 aa11.43□□□□□ -0.58
MRPS35-201ENST00000081029 FILIP1Q7Z7B0 1213 aa11.43□□□□□ -0.58
MRPS35-201ENST00000081029 VSTM4Q8IW00 320 aa11.43□□□□□ -0.58
MRPS35-201ENST00000081029 BEST2Q8NFU1 509 aa11.43□□□□□ -0.58
MRPS35-201ENST00000081029 FAM84AQ96KN4 292 aa11.43□□□□□ -0.58
MRPS35-201ENST00000081029 GPR62Q9BZJ7 368 aa11.43□□□□□ -0.58
MRPS35-201ENST00000081029 LMAN2LQ9H0V9 348 aa11.43□□□□□ -0.58
MRPS35-201ENST00000081029 ASB7Q9H672 318 aa11.43□□□□□ -0.58
MRPS35-201ENST00000081029 KIAA1586Q9HCI6 787 aa11.43□□□□□ -0.58
MRPS35-201ENST00000081029 RTN4Q9NQC3 1192 aaKnown RBP11.43□□□□□ -0.58
MRPS35-201ENST00000081029 CGNQ9P2M7 1197 aaKnown RBP11.43□□□□□ -0.58
MRPS35-201ENST00000081029 UBQLN1Q9UMX0 589 aaKnown RBP11.43□□□□□ -0.58
MRPS35-201ENST00000081029 PLXNA4Q9HCM2 1894 aa11.43□□□□□ -0.58
MRPS35-201ENST00000081029 HIDE1A8MVS5 230 aa11.42□□□□□ -0.58
MRPS35-201ENST00000081029 TEX33O43247 280 aa11.42□□□□□ -0.58
MRPS35-201ENST00000081029 XPOTO43592 962 aaKnown RBP11.42□□□□□ -0.58
MRPS35-201ENST00000081029 IL18RAPO95256 599 aa11.42□□□□□ -0.58
MRPS35-201ENST00000081029 EEF1GP26641 437 aaKnown RBP11.42□□□□□ -0.58
MRPS35-201ENST00000081029 LRRC63Q05C16 580 aa11.42□□□□□ -0.58
MRPS35-201ENST00000081029 ADAM9Q13443 819 aa11.42□□□□□ -0.58
MRPS35-201ENST00000081029 ARID5BQ14865 1188 aa11.42□□□□□ -0.58
MRPS35-201ENST00000081029 PTPN21Q16825 1174 aa11.42□□□□□ -0.58
MRPS35-201ENST00000081029 ZCWPW2Q504Y3 356 aa11.42□□□□□ -0.58
MRPS35-201ENST00000081029 TCEAL5Q5H9L2 206 aa11.42□□□□□ -0.58
MRPS35-201ENST00000081029 FAM171A1Q5VUB5 890 aa11.42□□□□□ -0.58
MRPS35-201ENST00000081029 FUT10Q6P4F1 479 aa11.42□□□□□ -0.58
MRPS35-201ENST00000081029 BRSK2Q8IWQ3 736 aa11.42□□□□□ -0.58
MRPS35-201ENST00000081029 DDX27Q96GQ7 796 aaKnown RBP11.42□□□□□ -0.58
MRPS35-201ENST00000081029 UROC1Q96N76 676 aa11.42□□□□□ -0.58
MRPS35-201ENST00000081029 FNBP1Q96RU3 617 aa11.42□□□□□ -0.58
MRPS35-201ENST00000081029 POP1Q99575 1024 aaKnown RBP11.42□□□□□ -0.58
MRPS35-201ENST00000081029 VN1R3Q9BXE9 311 aa11.42□□□□□ -0.58
MRPS35-201ENST00000081029 KCNF1Q9H3M0 494 aa11.42□□□□□ -0.58
MRPS35-201ENST00000081029 NSUN3Q9H649 340 aaKnown RBP11.42□□□□□ -0.58
MRPS35-201ENST00000081029 DPP3Q9NY33 737 aa11.42□□□□□ -0.58
MRPS35-201ENST00000081029 LMCD1Q9NZU5 365 aa11.42□□□□□ -0.58
MRPS35-201ENST00000081029 LZTS1Q9Y250 596 aa11.42□□□□□ -0.58
MRPS35-201ENST00000081029 FRMD4BQ9Y2L6 1034 aa11.42□□□□□ -0.58
MRPS35-201ENST00000081029 ZKSCAN5Q9Y2L8 839 aa11.42□□□□□ -0.58
MRPS35-201ENST00000081029 COL4A4P53420 1690 aaPredicted RBP11.42□□□□□ -0.58
MRPS35-201ENST00000081029 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.42□□□□□ -0.58
MRPS35-201ENST00000081029 KRT19P08727 400 aa11.42□□□□□ -0.58
MRPS35-201ENST00000081029 TNNI1P19237 187 aa11.42□□□□□ -0.58
MRPS35-201ENST00000081029 POU3F3P20264 500 aaPredicted RBP11.42□□□□□ -0.58
MRPS35-201ENST00000081029 NR2F2P24468 414 aa11.42□□□□□ -0.58
MRPS35-201ENST00000081029 RPL9P32969 192 aaKnown RBP11.42□□□□□ -0.58
MRPS35-201ENST00000081029 GTF2F1P35269 517 aaKnown RBP eCLIP11.42□□□□□ -0.58
MRPS35-201ENST00000081029 BRCC3P46736 316 aa11.42□□□□□ -0.58
MRPS35-201ENST00000081029 NRIP1P48552 1158 aa11.42□□□□□ -0.58
MRPS35-201ENST00000081029 CASP4P49662 377 aa11.42□□□□□ -0.58
MRPS35-201ENST00000081029 COPB1P53618 953 aaKnown RBP11.42□□□□□ -0.58
MRPS35-201ENST00000081029 ZBTB6Q15916 424 aa11.42□□□□□ -0.58
MRPS35-201ENST00000081029 TIGD5Q53EQ6 642 aa11.42□□□□□ -0.58
MRPS35-201ENST00000081029 ADGRD2Q7Z7M1 963 aa11.42□□□□□ -0.58
MRPS35-201ENST00000081029 CREBRFQ8IUR6 639 aa11.42□□□□□ -0.58
MRPS35-201ENST00000081029 EFCAB13Q8IY85 973 aa11.42□□□□□ -0.58
MRPS35-201ENST00000081029 C3orf58Q8NDZ4 430 aa11.42□□□□□ -0.58
MRPS35-201ENST00000081029 CACTINQ8WUQ7 758 aaKnown RBP11.42□□□□□ -0.58
MRPS35-201ENST00000081029 TLE6Q9H808 572 aa11.42□□□□□ -0.58
MRPS35-201ENST00000081029 NGRNQ9NPE2 291 aaKnown RBP11.42□□□□□ -0.58
MRPS35-201ENST00000081029 TAB2Q9NYJ8 693 aa11.42□□□□□ -0.58
MRPS35-201ENST00000081029 SF3B1O75533 1304 aaKnown RBP eCLIP11.41□□□□□ -0.582e-7■■■■■ 53.5
MRPS35-201ENST00000081029 SOD2P04179 222 aa11.41□□□□□ -0.58
MRPS35-201ENST00000081029 URODP06132 367 aa11.41□□□□□ -0.58
MRPS35-201ENST00000081029 ADRB2P07550 413 aa11.41□□□□□ -0.58
MRPS35-201ENST00000081029 TMEM191BP0C7N4 346 aa11.41□□□□□ -0.58
MRPS35-201ENST00000081029 RPL13P26373 211 aaKnown RBP11.41□□□□□ -0.58
MRPS35-201ENST00000081029 PBX1P40424 430 aa11.41□□□□□ -0.58
MRPS35-201ENST00000081029 SMC1AQ14683 1233 aaKnown RBP11.41□□□□□ -0.58
MRPS35-201ENST00000081029 FILIP1LQ4L180 1135 aa11.41□□□□□ -0.58
MRPS35-201ENST00000081029 GLYCTKQ8IVS8 523 aa11.41□□□□□ -0.58
MRPS35-201ENST00000081029 MRPL43Q8N983 215 aaKnown RBP11.41□□□□□ -0.58
MRPS35-201ENST00000081029 ANKRD20A12PQ8NF67 263 aa11.41□□□□□ -0.58
MRPS35-201ENST00000081029 PPP2R3CQ969Q6 453 aa11.41□□□□□ -0.58
MRPS35-201ENST00000081029 TSG101Q99816 390 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms