RNA–Protein interactions for RNA: ENST00000023939.8

RTFDC1-201, Transcript of Protein RTF2 homolog, humanhuman

TSL 2 BASIC

Gene RTFDC1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-201ENST00000023939 MCOLN2Q8IZK6 566 aa15.31■□□□□ 0.04
RTFDC1-201ENST00000023939 ZNF653Q96CK0 615 aa15.31■□□□□ 0.04
RTFDC1-201ENST00000023939 VRTNQ9H8Y1 702 aa15.31■□□□□ 0.04
RTFDC1-201ENST00000023939 ANK1P16157 1881 aa15.3■□□□□ 0.04
RTFDC1-201ENST00000023939 LACTBL1A8MY62 500 aa15.3■□□□□ 0.04
RTFDC1-201ENST00000023939 MAP2K7O14733 419 aa15.3■□□□□ 0.04
RTFDC1-201ENST00000023939 TNPO2O14787 897 aaKnown RBP15.3■□□□□ 0.04
RTFDC1-201ENST00000023939 CA12O43570 354 aa15.3■□□□□ 0.04
RTFDC1-201ENST00000023939 CEP104O60308 925 aa15.3■□□□□ 0.04
RTFDC1-201ENST00000023939 GPR32O75388 356 aa15.3■□□□□ 0.04
RTFDC1-201ENST00000023939 ERLIN2O94905 339 aa15.3■□□□□ 0.04
RTFDC1-201ENST00000023939 CYP2B6P20813 491 aa15.3■□□□□ 0.04
RTFDC1-201ENST00000023939 TNFRSF8P28908 595 aa15.3■□□□□ 0.04
RTFDC1-201ENST00000023939 GNA15P30679 374 aa15.3■□□□□ 0.04
RTFDC1-201ENST00000023939 ATICP31939 592 aa15.3■□□□□ 0.04
RTFDC1-201ENST00000023939 PSEN2P49810 448 aa15.3■□□□□ 0.04
RTFDC1-201ENST00000023939 DNA2P51530 1060 aa15.3■□□□□ 0.04
RTFDC1-201ENST00000023939 YWHAEP62258 255 aaKnown RBP15.3■□□□□ 0.04
RTFDC1-201ENST00000023939 CRHR2Q13324 411 aa15.3■□□□□ 0.04
RTFDC1-201ENST00000023939 ZNF699Q32M78 642 aa15.3■□□□□ 0.04
RTFDC1-201ENST00000023939 DCAF4L1Q3SXM0 396 aa15.3■□□□□ 0.04
RTFDC1-201ENST00000023939 MAP9Q49MG5 647 aa15.3■□□□□ 0.04
RTFDC1-201ENST00000023939 SCARA3Q6AZY7 606 aa15.3■□□□□ 0.04
RTFDC1-201ENST00000023939 CCNI2Q6ZMN8 369 aaPredicted RBP15.3■□□□□ 0.04
RTFDC1-201ENST00000023939 CDR2LQ86X02 465 aaPredicted RBP15.3■□□□□ 0.04
RTFDC1-201ENST00000023939 PHF13Q86YI8 300 aaPredicted RBP15.3■□□□□ 0.04
RTFDC1-201ENST00000023939 TMEM192Q8IY95 271 aa15.3■□□□□ 0.04
RTFDC1-201ENST00000023939 CXorf38Q8TB03 319 aa15.3■□□□□ 0.04
RTFDC1-201ENST00000023939 ZNF564Q8TBZ8 553 aaPredicted RBP15.3■□□□□ 0.04
RTFDC1-201ENST00000023939 LRRC1Q9BTT6 524 aa15.3■□□□□ 0.04
RTFDC1-201ENST00000023939 NUP85Q9BW27 656 aa15.3■□□□□ 0.04
RTFDC1-201ENST00000023939 GCOM2Q9BZD3 368 aaPredicted RBP15.3■□□□□ 0.04
RTFDC1-201ENST00000023939 AP5M1Q9H0R1 490 aa15.3■□□□□ 0.04
RTFDC1-201ENST00000023939 FAM124BQ9H5Z6 455 aaPredicted RBP15.3■□□□□ 0.04
RTFDC1-201ENST00000023939 C2CD2Q9Y426 696 aa15.3■□□□□ 0.04
RTFDC1-201ENST00000023939 DOCK3Q8IZD9 2030 aa15.3■□□□□ 0.04
RTFDC1-201ENST00000023939 CCDC188H7C350 402 aa15.29■□□□□ 0.04
RTFDC1-201ENST00000023939 HOXC8P31273 242 aa15.29■□□□□ 0.04
RTFDC1-201ENST00000023939 GRM5P41594 1212 aa15.29■□□□□ 0.04
RTFDC1-201ENST00000023939 ASPAP45381 313 aa15.29■□□□□ 0.04
RTFDC1-201ENST00000023939 OSTNP61366 133 aa15.29■□□□□ 0.04
RTFDC1-201ENST00000023939 TNNC1P63316 161 aa15.29■□□□□ 0.04
RTFDC1-201ENST00000023939 NOMO3P69849 1222 aa15.29■□□□□ 0.04
RTFDC1-201ENST00000023939 SLC10A6Q3KNW5 377 aa15.29■□□□□ 0.04
RTFDC1-201ENST00000023939 MON1BQ7L1V2 547 aa15.29■□□□□ 0.04
RTFDC1-201ENST00000023939 CD101Q93033 1021 aa15.29■□□□□ 0.04
RTFDC1-201ENST00000023939 CPB2Q96IY4 423 aa15.29■□□□□ 0.04
RTFDC1-201ENST00000023939 SCLT1Q96NL6 688 aa15.29■□□□□ 0.04
RTFDC1-201ENST00000023939 ADPGKQ9BRR6 497 aa15.29■□□□□ 0.04
RTFDC1-201ENST00000023939 KATNAL1Q9BW62 490 aa15.29■□□□□ 0.04
RTFDC1-201ENST00000023939 WNT8AQ9H1J5 351 aa15.29■□□□□ 0.04
RTFDC1-201ENST00000023939 CNOT8Q9UFF9 292 aaKnown RBP15.29■□□□□ 0.04
RTFDC1-201ENST00000023939 SIX4Q9UIU6 781 aa15.29■□□□□ 0.04
RTFDC1-201ENST00000023939 KPNA6O60684 536 aa15.29■□□□□ 0.04
RTFDC1-201ENST00000023939 CSDE1O75534 798 aaKnown RBP15.29■□□□□ 0.04
RTFDC1-201ENST00000023939 LSM8O95777 96 aaKnown RBP15.29■□□□□ 0.04
RTFDC1-201ENST00000023939 STAU1O95793 577 aaKnown RBP15.29■□□□□ 0.04
RTFDC1-201ENST00000023939 NFICP08651 508 aa15.29■□□□□ 0.04
RTFDC1-201ENST00000023939 NSFP46459 744 aaKnown RBP15.29■□□□□ 0.04
RTFDC1-201ENST00000023939 C8orf74Q6P047 294 aa15.29■□□□□ 0.04
RTFDC1-201ENST00000023939 HDXQ7Z353 690 aa15.29■□□□□ 0.04
RTFDC1-201ENST00000023939 KRT222Q8N1A0 295 aa15.29■□□□□ 0.04
RTFDC1-201ENST00000023939 C1orf127Q8N9H9 656 aa15.29■□□□□ 0.04
RTFDC1-201ENST00000023939 BCO2Q9BYV7 579 aa15.29■□□□□ 0.04
RTFDC1-201ENST00000023939 PLEKHA5Q9HAU0 1116 aa15.29■□□□□ 0.04
RTFDC1-201ENST00000023939 CISHQ9NSE2 258 aa15.29■□□□□ 0.04
RTFDC1-201ENST00000023939 STIM2Q9P246 746 aa15.29■□□□□ 0.04
RTFDC1-201ENST00000023939 NOC2LQ9Y3T9 749 aaKnown RBP15.29■□□□□ 0.04
RTFDC1-201ENST00000023939 MROH7Q68CQ1 1323 aa15.28■□□□□ 0.04
RTFDC1-201ENST00000023939 SASH3O75995 380 aa15.28■□□□□ 0.04
RTFDC1-201ENST00000023939 CYP2C9P11712 490 aa15.28■□□□□ 0.04
RTFDC1-201ENST00000023939 DARSP14868 501 aaKnown RBP15.28■□□□□ 0.04
RTFDC1-201ENST00000023939 CTNNA2P26232 953 aa15.28■□□□□ 0.04
RTFDC1-201ENST00000023939 C1QBPQ07021 282 aaKnown RBP15.28■□□□□ 0.04
RTFDC1-201ENST00000023939 NAA35Q5VZE5 725 aa15.28■□□□□ 0.04
RTFDC1-201ENST00000023939 JADE1Q6IE81 842 aa15.28■□□□□ 0.04
RTFDC1-201ENST00000023939 UBL4BQ8N7F7 174 aa15.28■□□□□ 0.04
RTFDC1-201ENST00000023939 ZNF606Q8WXB4 792 aa15.28■□□□□ 0.04
RTFDC1-201ENST00000023939 CYFIP2Q96F07 1278 aa15.28■□□□□ 0.04
RTFDC1-201ENST00000023939 ACAP3Q96P50 834 aa15.28■□□□□ 0.04
RTFDC1-201ENST00000023939 PPP1R16BQ96T49 567 aa15.28■□□□□ 0.04
RTFDC1-201ENST00000023939 NAP1L3Q99457 506 aaPredicted RBP15.28■□□□□ 0.04
RTFDC1-201ENST00000023939 ZSWIM1Q9BR11 485 aa15.28■□□□□ 0.04
RTFDC1-201ENST00000023939 RNF216Q9NWF9 866 aaPredicted RBP15.28■□□□□ 0.04
RTFDC1-201ENST00000023939 DMGDHQ9UI17 866 aaKnown RBP15.28■□□□□ 0.04
RTFDC1-201ENST00000023939 DERAQ9Y315 318 aa15.28■□□□□ 0.04
RTFDC1-201ENST00000023939 THAP12O43422 761 aa15.27■□□□□ 0.04
RTFDC1-201ENST00000023939 DUSP11O75319 330 aaKnown RBP15.27■□□□□ 0.04
RTFDC1-201ENST00000023939 CALCAP01258 141 aa15.27■□□□□ 0.04
RTFDC1-201ENST00000023939 AKR1A1P14550 325 aa15.27■□□□□ 0.04
RTFDC1-201ENST00000023939 COMTP21964 271 aa15.27■□□□□ 0.04
RTFDC1-201ENST00000023939 AXLP30530 894 aa15.27■□□□□ 0.04
RTFDC1-201ENST00000023939 HOXA11P31270 313 aaPredicted RBP15.27■□□□□ 0.04
RTFDC1-201ENST00000023939 CDH5P33151 784 aaPredicted RBP15.27■□□□□ 0.04
RTFDC1-201ENST00000023939 PEX5P50542 639 aa15.27■□□□□ 0.04
RTFDC1-201ENST00000023939 NKX3-2P78367 333 aa15.27■□□□□ 0.04
RTFDC1-201ENST00000023939 PPP2R5EQ16537 467 aa15.27■□□□□ 0.04
RTFDC1-201ENST00000023939 KIZQ2M2Z5 673 aa15.27■□□□□ 0.04
RTFDC1-201ENST00000023939 ZNF667Q5HYK9 610 aa15.27■□□□□ 0.04
RTFDC1-201ENST00000023939 LIN9Q5TKA1 542 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 107 ms