RNA–Protein interactions for RNA: ENST00000011898.9

TSPAN9-201, Transcript of tetraspanin 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN9, Length 4,323 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-201ENST00000011898 CPP00450 1065 aa12.81□□□□□ -0.36
TSPAN9-201ENST00000011898 RSPH10BP0C881 870 aa12.81□□□□□ -0.36
TSPAN9-201ENST00000011898 NEK2P51955 445 aa12.81□□□□□ -0.36
TSPAN9-201ENST00000011898 RCN1Q15293 331 aa12.81□□□□□ -0.36
TSPAN9-201ENST00000011898 C9orf131Q5VYM1 1079 aa12.81□□□□□ -0.36
TSPAN9-201ENST00000011898 MICALL2Q8IY33 904 aa12.81□□□□□ -0.36
TSPAN9-201ENST00000011898 PYROXD1Q8WU10 500 aa12.81□□□□□ -0.36
TSPAN9-201ENST00000011898 HERC5Q9UII4 1024 aaKnown RBP12.81□□□□□ -0.36
TSPAN9-201ENST00000011898 CCDC88AQ3V6T2 1871 aa12.81□□□□□ -0.36
TSPAN9-201ENST00000011898 DLEC1Q9Y238 1755 aa12.8□□□□□ -0.36
TSPAN9-201ENST00000011898 CAPN9O14815 690 aa12.8□□□□□ -0.36
TSPAN9-201ENST00000011898 ABL1P00519 1130 aa12.8□□□□□ -0.36
TSPAN9-201ENST00000011898 CHRM1P11229 460 aaPredicted RBP12.8□□□□□ -0.36
TSPAN9-201ENST00000011898 PPP1R2P3Q6NXS1 205 aa12.8□□□□□ -0.36
TSPAN9-201ENST00000011898 TMEM139Q8IV31 216 aa12.8□□□□□ -0.36
TSPAN9-201ENST00000011898 PDIK1LQ8N165 341 aa12.8□□□□□ -0.36
TSPAN9-201ENST00000011898 AGAP11Q8TF27 550 aa12.8□□□□□ -0.36
TSPAN9-201ENST00000011898 SCFD1Q8WVM8 642 aa12.8□□□□□ -0.36
TSPAN9-201ENST00000011898 RNF34Q969K3 372 aa12.8□□□□□ -0.36
TSPAN9-201ENST00000011898 NUDT12Q9BQG2 462 aa12.8□□□□□ -0.36
TSPAN9-201ENST00000011898 FEM1BQ9UK73 627 aa12.8□□□□□ -0.36
TSPAN9-201ENST00000011898 MARK3P27448 753 aa12.8□□□□□ -0.36
TSPAN9-201ENST00000011898 CASP4P49662 377 aa12.8□□□□□ -0.36
TSPAN9-201ENST00000011898 KRT76Q01546 638 aa12.8□□□□□ -0.36
TSPAN9-201ENST00000011898 NFIAQ12857 509 aa12.8□□□□□ -0.36
TSPAN9-201ENST00000011898 MKRN4PQ13434 485 aaPredicted RBP12.8□□□□□ -0.36
TSPAN9-201ENST00000011898 KPNB1Q14974 876 aaKnown RBP12.8□□□□□ -0.36
TSPAN9-201ENST00000011898 MEA1Q16626 185 aa12.8□□□□□ -0.36
TSPAN9-201ENST00000011898 CENPUQ71F23 418 aa12.8□□□□□ -0.36
TSPAN9-201ENST00000011898 EPM2AIP1Q7L775 607 aaPredicted RBP12.8□□□□□ -0.36
TSPAN9-201ENST00000011898 SLC30A5Q8TAD4 765 aa12.8□□□□□ -0.36
TSPAN9-201ENST00000011898 WDR60Q8WVS4 1066 aa12.8□□□□□ -0.36
TSPAN9-201ENST00000011898 GORASP1Q9BQQ3 440 aa12.8□□□□□ -0.36
TSPAN9-201ENST00000011898 GALNT8Q9NY28 637 aa12.8□□□□□ -0.36
TSPAN9-201ENST00000011898 CNOT7Q9UIV1 285 aaKnown RBP12.8□□□□□ -0.36
TSPAN9-201ENST00000011898 GLI1P08151 1106 aa12.8□□□□□ -0.36
TSPAN9-201ENST00000011898 CCDC159P0C7I6 412 aa12.8□□□□□ -0.36
TSPAN9-201ENST00000011898 SRGAP2CP0DJJ0 459 aa12.8□□□□□ -0.36
TSPAN9-201ENST00000011898 PON1P27169 355 aa12.8□□□□□ -0.36
TSPAN9-201ENST00000011898 FAM160B1Q5W0V3 765 aa12.8□□□□□ -0.36
TSPAN9-201ENST00000011898 SCARA5Q6ZMJ2 495 aa12.8□□□□□ -0.36
TSPAN9-201ENST00000011898 CASKIN2Q8WXE0 1202 aa12.8□□□□□ -0.36
TSPAN9-201ENST00000011898 CATSPER2Q96P56 530 aa12.8□□□□□ -0.36
TSPAN9-201ENST00000011898 ADPGKQ9BRR6 497 aa12.8□□□□□ -0.36
TSPAN9-201ENST00000011898 CYP4F11Q9HBI6 524 aa12.8□□□□□ -0.36
TSPAN9-201ENST00000011898 KIF13BQ9NQT8 1826 aa12.8□□□□□ -0.36
TSPAN9-201ENST00000011898 RTN2O75298 545 aa12.79□□□□□ -0.36
TSPAN9-201ENST00000011898 TJP3O95049 919 aa12.79□□□□□ -0.36
TSPAN9-201ENST00000011898 MT-ND3P03897 115 aa12.79□□□□□ -0.36
TSPAN9-201ENST00000011898 PSMC5P62195 406 aa12.79□□□□□ -0.36
TSPAN9-201ENST00000011898 ERICH1Q86X53 443 aa12.79□□□□□ -0.36
TSPAN9-201ENST00000011898 TPCN2Q8NHX9 752 aa12.79□□□□□ -0.36
TSPAN9-201ENST00000011898 MOV10L1Q9BXT6 1211 aaKnown RBP12.79□□□□□ -0.36
TSPAN9-201ENST00000011898 MYOZ2Q9NPC6 264 aa12.79□□□□□ -0.36
TSPAN9-201ENST00000011898 GIMAP4Q9NUV9 329 aa12.79□□□□□ -0.36
TSPAN9-201ENST00000011898 DDX18Q9NVP1 670 aaKnown RBP12.79□□□□□ -0.36
TSPAN9-201ENST00000011898 CHORDC1Q9UHD1 332 aaPredicted RBP12.79□□□□□ -0.36
TSPAN9-201ENST00000011898 TTLL3Q9Y4R7 772 aa12.79□□□□□ -0.36
TSPAN9-201ENST00000011898 ENTPD3O75355 529 aa12.79□□□□□ -0.36
TSPAN9-201ENST00000011898 PYGLP06737 847 aa12.79□□□□□ -0.36
TSPAN9-201ENST00000011898 TMEM253P0C7T8 217 aa12.79□□□□□ -0.36
TSPAN9-201ENST00000011898 COPB2P35606 906 aa12.79□□□□□ -0.36
TSPAN9-201ENST00000011898 EVX2Q03828 476 aa12.79□□□□□ -0.36
TSPAN9-201ENST00000011898 HP1BP3Q5SSJ5 553 aaPredicted RBP12.79□□□□□ -0.36
TSPAN9-201ENST00000011898 GJC2Q5T442 439 aaPredicted RBP12.79□□□□□ -0.36
TSPAN9-201ENST00000011898 SLFN12LQ6IEE8 588 aa12.79□□□□□ -0.36
TSPAN9-201ENST00000011898 LRIG3Q6UXM1 1119 aa12.79□□□□□ -0.36
TSPAN9-201ENST00000011898 DNAAF5Q86Y56 855 aa12.79□□□□□ -0.36
TSPAN9-201ENST00000011898 GPC2Q8N158 579 aa12.79□□□□□ -0.36
TSPAN9-201ENST00000011898 SIX5Q8N196 739 aa12.79□□□□□ -0.36
TSPAN9-201ENST00000011898 TTC17Q96AE7 1141 aa12.79□□□□□ -0.36
TSPAN9-201ENST00000011898 ERP44Q9BS26 406 aa12.79□□□□□ -0.36
TSPAN9-201ENST00000011898 TLR10Q9BXR5 811 aa12.79□□□□□ -0.36
TSPAN9-201ENST00000011898 EPS15L1Q9UBC2 864 aa12.79□□□□□ -0.36
TSPAN9-201ENST00000011898 GABBR1Q9UBS5 961 aa12.79□□□□□ -0.36
TSPAN9-201ENST00000011898 MAST2Q6P0Q8 1798 aa12.79□□□□□ -0.36
TSPAN9-201ENST00000011898 ZSCAN5CA6NGD5 496 aaPredicted RBP12.79□□□□□ -0.36
TSPAN9-201ENST00000011898 LSM1O15116 133 aaKnown RBP12.79□□□□□ -0.36
TSPAN9-201ENST00000011898 HSD17B3P37058 310 aa12.79□□□□□ -0.36
TSPAN9-201ENST00000011898 KCNJ1P48048 391 aa12.79□□□□□ -0.36
TSPAN9-201ENST00000011898 PNMA5Q96PV4 448 aa12.79□□□□□ -0.36
TSPAN9-201ENST00000011898 HAUS8Q9BT25 410 aa12.79□□□□□ -0.36
TSPAN9-201ENST00000011898 MKNK1Q9BUB5 465 aa12.79□□□□□ -0.36
TSPAN9-201ENST00000011898 OLFML3Q9NRN5 406 aa12.79□□□□□ -0.36
TSPAN9-201ENST00000011898 BLOC1S4Q9NUP1 217 aa12.79□□□□□ -0.36
TSPAN9-201ENST00000011898 HSPBP1Q9NZL4 362 aa12.79□□□□□ -0.36
TSPAN9-201ENST00000011898 BTBD7Q9P203 1132 aa12.79□□□□□ -0.36
TSPAN9-201ENST00000011898 SUCLA2Q9P2R7 463 aaPredicted RBP12.79□□□□□ -0.36
TSPAN9-201ENST00000011898 SPDYE2BA6NHP3 402 aa12.79□□□□□ -0.36
TSPAN9-201ENST00000011898 SPDYE6P0CI01 402 aa12.79□□□□□ -0.36
TSPAN9-201ENST00000011898 NCF2P19878 526 aaPredicted RBP12.79□□□□□ -0.36
TSPAN9-201ENST00000011898 ARFIP2P53365 341 aa12.79□□□□□ -0.36
TSPAN9-201ENST00000011898 ELF3P78545 371 aaPredicted RBP12.79□□□□□ -0.36
TSPAN9-201ENST00000011898 ACCSLQ4AC99 568 aa12.79□□□□□ -0.36
TSPAN9-201ENST00000011898 RINT1Q6NUQ1 792 aa12.79□□□□□ -0.36
TSPAN9-201ENST00000011898 SWSAP1Q6NVH7 229 aa12.79□□□□□ -0.36
TSPAN9-201ENST00000011898 JAMLQ86YT9 394 aa12.79□□□□□ -0.36
TSPAN9-201ENST00000011898 PRCCQ92733 491 aaPredicted RBP12.79□□□□□ -0.36
TSPAN9-201ENST00000011898 NRBF2Q96F24 287 aa12.79□□□□□ -0.36
TSPAN9-201ENST00000011898 ANKRD36BP1Q96IX9 119 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms