RNA–Protein interactions for RNA: ENSMUST00000200959.1

Scn8a-207, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

TSL 3 BASIC

Gene Scn8a, Length 587 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-207ENSMUST00000200959 Bex2Q9WTZ8 129 aa8.53□□□□□ -1.04
Scn8a-207ENSMUST00000200959 Cspg4Q8VHY0 2327 aa8.53□□□□□ -1.04
Scn8a-207ENSMUST00000200959 Col7a1Q63870 2944 aa8.52□□□□□ -1.05
Scn8a-207ENSMUST00000200959 Fam46aD3Z5S8 447 aa8.52□□□□□ -1.05
Scn8a-207ENSMUST00000200959 Vmn2r115E9Q0E7 857 aa8.52□□□□□ -1.05
Scn8a-207ENSMUST00000200959 Rnf169E9Q7F2 694 aa8.52□□□□□ -1.05
Scn8a-207ENSMUST00000200959 Cyp2w1E9Q816 493 aa8.52□□□□□ -1.05
Scn8a-207ENSMUST00000200959 Vmn2r19G5E8G4 854 aa8.52□□□□□ -1.05
Scn8a-207ENSMUST00000200959 IkbkbO88351 757 aa8.52□□□□□ -1.05
Scn8a-207ENSMUST00000200959 Gna11P21278 359 aa8.52□□□□□ -1.05
Scn8a-207ENSMUST00000200959 Tfdp1Q08639 410 aa8.52□□□□□ -1.05
Scn8a-207ENSMUST00000200959 Gpr174Q3U507 335 aa8.52□□□□□ -1.05
Scn8a-207ENSMUST00000200959 Sh3gl3Q62421 347 aa8.52□□□□□ -1.05
Scn8a-207ENSMUST00000200959 Snx31Q6P8Y7 439 aa8.52□□□□□ -1.05
Scn8a-207ENSMUST00000200959 Lrfn2Q80TG9 788 aa8.52□□□□□ -1.05
Scn8a-207ENSMUST00000200959 Tbc1d5Q80XQ2 815 aa8.52□□□□□ -1.05
Scn8a-207ENSMUST00000200959 Zbtb42Q811H0 420 aa8.52□□□□□ -1.05
Scn8a-207ENSMUST00000200959 Wdr27Q8C5V5 780 aa8.52□□□□□ -1.05
Scn8a-207ENSMUST00000200959 Lrrc14Q8VC16 493 aa8.52□□□□□ -1.05
Scn8a-207ENSMUST00000200959 Olfr1353Q8VGU8 309 aa8.52□□□□□ -1.05
Scn8a-207ENSMUST00000200959 Fam3cQ91VU0 227 aa8.52□□□□□ -1.05
Scn8a-207ENSMUST00000200959 Apobec3Q99J72 440 aaKnown RBP8.52□□□□□ -1.05
Scn8a-207ENSMUST00000200959 Tex46Q9CPU3 165 aa8.52□□□□□ -1.05
Scn8a-207ENSMUST00000200959 PigkQ9CXY9 395 aa8.52□□□□□ -1.05
Scn8a-207ENSMUST00000200959 Lrrc71Q9D3W5 558 aa8.52□□□□□ -1.05
Scn8a-207ENSMUST00000200959 Tfcp2Q9ERA0 502 aa8.52□□□□□ -1.05
Scn8a-207ENSMUST00000200959 CenpkQ9ESN5 271 aa8.52□□□□□ -1.05
Scn8a-207ENSMUST00000200959 Add3Q9QYB5 706 aaKnown RBP8.52□□□□□ -1.05
Scn8a-207ENSMUST00000200959 ChmlQ9QZD5 621 aa8.52□□□□□ -1.05
Scn8a-207ENSMUST00000200959 Pmfbp1Q9WVQ0 1022 aa8.52□□□□□ -1.05
Scn8a-207ENSMUST00000200959 Mbd3Q9Z2D8 285 aaKnown RBP8.52□□□□□ -1.05
Scn8a-207ENSMUST00000200959 Eif2ak1Q9Z2R9 619 aa8.52□□□□□ -1.05
Scn8a-207ENSMUST00000200959 Sptan1P16546 2472 aaKnown RBP8.52□□□□□ -1.05
Scn8a-207ENSMUST00000200959 Smg1Q8BKX6 3658 aaKnown RBP8.51□□□□□ -1.05
Scn8a-207ENSMUST00000200959 Gm4985A2ALC6 410 aa8.51□□□□□ -1.05
Scn8a-207ENSMUST00000200959 Cyp26c1B2RXA7 518 aa8.51□□□□□ -1.05
Scn8a-207ENSMUST00000200959 Gm3642K7N6V4 267 aa8.51□□□□□ -1.05
Scn8a-207ENSMUST00000200959 P4hbP09103 509 aaKnown RBP8.51□□□□□ -1.05
Scn8a-207ENSMUST00000200959 Ppp3ccP48455 513 aa8.51□□□□□ -1.05
Scn8a-207ENSMUST00000200959 HccsP53702 272 aa8.51□□□□□ -1.05
Scn8a-207ENSMUST00000200959 Pcbp1P60335 356 aaKnown RBP8.51□□□□□ -1.05
Scn8a-207ENSMUST00000200959 Togaram2Q3TYG6 1002 aa8.51□□□□□ -1.05
Scn8a-207ENSMUST00000200959 Snx25Q3ZT31 840 aa8.51□□□□□ -1.05
Scn8a-207ENSMUST00000200959 GstcdQ5RL51 634 aa8.51□□□□□ -1.05
Scn8a-207ENSMUST00000200959 SkiQ60698 725 aa8.51□□□□□ -1.05
Scn8a-207ENSMUST00000200959 Znf235Q61116 645 aa8.51□□□□□ -1.05
Scn8a-207ENSMUST00000200959 Klhl23Q6GQU2 558 aa8.51□□□□□ -1.05
Scn8a-207ENSMUST00000200959 Rexo1Q7TT28 1213 aa8.51□□□□□ -1.05
Scn8a-207ENSMUST00000200959 Prickle2Q80Y24 845 aa8.51□□□□□ -1.05
Scn8a-207ENSMUST00000200959 Slc6a17Q8BJI1 727 aa8.51□□□□□ -1.05
Scn8a-207ENSMUST00000200959 Fam124bQ8BLQ0 456 aa8.51□□□□□ -1.05
Scn8a-207ENSMUST00000200959 Pms1Q8K119 917 aa8.51□□□□□ -1.05
Scn8a-207ENSMUST00000200959 Tceal3Q8R0A5 200 aa8.51□□□□□ -1.05
Scn8a-207ENSMUST00000200959 Olfr390Q8VEZ7 311 aa8.51□□□□□ -1.05
Scn8a-207ENSMUST00000200959 Impa2Q91UZ5 290 aa8.51□□□□□ -1.05
Scn8a-207ENSMUST00000200959 Prpf3Q922U1 683 aaKnown RBP8.51□□□□□ -1.05
Scn8a-207ENSMUST00000200959 Ferd3lQ923Z4 168 aa8.51□□□□□ -1.05
Scn8a-207ENSMUST00000200959 Zmat2Q9CPW7 199 aa8.51□□□□□ -1.05
Scn8a-207ENSMUST00000200959 Etnk1Q9D4V0 363 aa8.51□□□□□ -1.05
Scn8a-207ENSMUST00000200959 Tlr9Q9EQU3 1032 aa8.51□□□□□ -1.05
Scn8a-207ENSMUST00000200959 Wdr54Q9R0D8 334 aa8.51□□□□□ -1.05
Scn8a-207ENSMUST00000200959 Spata31d1aE9QA35 1336 aa8.51□□□□□ -1.05
Scn8a-207ENSMUST00000200959 Akap9Q70FJ1 3797 aa8.5□□□□□ -1.05
Scn8a-207ENSMUST00000200959 Myh11O08638 1972 aa8.5□□□□□ -1.05
Scn8a-207ENSMUST00000200959 Slc6a16A0A1L1SR47 742 aa8.5□□□□□ -1.05
Scn8a-207ENSMUST00000200959 Ajap1A2ALI5 412 aa8.5□□□□□ -1.05
Scn8a-207ENSMUST00000200959 Mroh4G3X8W1 983 aa8.5□□□□□ -1.05
Scn8a-207ENSMUST00000200959 Olfr743L7N1Y2 311 aa8.5□□□□□ -1.05
Scn8a-207ENSMUST00000200959 Ap1b1O35643 943 aaKnown RBP8.5□□□□□ -1.05
Scn8a-207ENSMUST00000200959 Per1O35973 1291 aa8.5□□□□□ -1.05
Scn8a-207ENSMUST00000200959 C1ql1O88992 258 aa8.5□□□□□ -1.05
Scn8a-207ENSMUST00000200959 P01631 113 aa8.5□□□□□ -1.05
Scn8a-207ENSMUST00000200959 TnfP06804 235 aa8.5□□□□□ -1.05
Scn8a-207ENSMUST00000200959 FurinP23188 793 aa8.5□□□□□ -1.05
Scn8a-207ENSMUST00000200959 AvpP35455 168 aa8.5□□□□□ -1.05
Scn8a-207ENSMUST00000200959 Wbp2P97765 261 aa8.5□□□□□ -1.05
Scn8a-207ENSMUST00000200959 Pak6Q3ULB5 682 aa8.5□□□□□ -1.05
Scn8a-207ENSMUST00000200959 Lrrc47Q505F5 581 aaKnown RBP8.5□□□□□ -1.05
Scn8a-207ENSMUST00000200959 Taar7eQ5QD09 358 aa8.5□□□□□ -1.05
Scn8a-207ENSMUST00000200959 Bdkrb1Q61125 334 aa8.5□□□□□ -1.05
Scn8a-207ENSMUST00000200959 GartQ64737 1010 aa8.5□□□□□ -1.05
Scn8a-207ENSMUST00000200959 Kxd1Q80XH1 177 aa8.5□□□□□ -1.05
Scn8a-207ENSMUST00000200959 Tgif2Q8C0Y1 237 aa8.5□□□□□ -1.05
Scn8a-207ENSMUST00000200959 Q8CCC3 530 aa8.5□□□□□ -1.05
Scn8a-207ENSMUST00000200959 Lrrc3bQ8VCH9 259 aa8.5□□□□□ -1.05
Scn8a-207ENSMUST00000200959 Olfr393Q8VGR6 312 aa8.5□□□□□ -1.05
Scn8a-207ENSMUST00000200959 Bicd2Q921C5 820 aa8.5□□□□□ -1.05
Scn8a-207ENSMUST00000200959 Sdcbp2Q99JZ0 292 aa8.5□□□□□ -1.05
Scn8a-207ENSMUST00000200959 Yaf2Q99LW6 179 aa8.5□□□□□ -1.05
Scn8a-207ENSMUST00000200959 NapaQ9DB05 295 aa8.5□□□□□ -1.05
Scn8a-207ENSMUST00000200959 Mmp1aQ9EPL5 464 aa8.5□□□□□ -1.05
Scn8a-207ENSMUST00000200959 NckipsdQ9ESJ4 714 aa8.5□□□□□ -1.05
Scn8a-207ENSMUST00000200959 PollQ9QXE2 573 aaKnown RBP8.5□□□□□ -1.05
Scn8a-207ENSMUST00000200959 Sec16aA2AIX1 2377 aa8.5□□□□□ -1.05
Scn8a-207ENSMUST00000200959 Crybg1A0A0G2JG52 2065 aa8.5□□□□□ -1.05
Scn8a-207ENSMUST00000200959 Rai1Q61818 1889 aa8.49□□□□□ -1.05
Scn8a-207ENSMUST00000200959 Gm13276A0A087WR18 182 aa8.49□□□□□ -1.05
Scn8a-207ENSMUST00000200959 Gm3854A0A1B0GSS6 495 aa8.49□□□□□ -1.05
Scn8a-207ENSMUST00000200959 Ism1A2ATD1 454 aa8.49□□□□□ -1.05
Scn8a-207ENSMUST00000200959 Ptger3P30557 365 aa8.49□□□□□ -1.05
Retrieved 100 of 22,080 RNA–protein pairs in 41.5 ms