RNA–Protein interactions for RNA: ENSMUST00000111438.1

Ddx55-202, Transcript of ATP-dependent RNA helicase DDX55, mousemouse

TSL 2 BASIC

Gene Ddx55, Length 2,737 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55-202ENSMUST00000111438 Trim65Q8BFW4 522 aa13.11□□□□□ -0.31
Ddx55-202ENSMUST00000111438 Pnma2Q8BHK0 365 aa13.11□□□□□ -0.31
Ddx55-202ENSMUST00000111438 Eml3Q8VC03 897 aa13.11□□□□□ -0.31
Ddx55-202ENSMUST00000111438 Pcdha9Q91Y11 979 aa13.11□□□□□ -0.31
Ddx55-202ENSMUST00000111438 Tubgcp4Q9D4F8 667 aa13.11□□□□□ -0.31
Ddx55-202ENSMUST00000111438 Abcb6Q9DC29 842 aa13.11□□□□□ -0.31
Ddx55-202ENSMUST00000111438 Kcnq4Q9JK97 696 aa13.11□□□□□ -0.31
Ddx55-202ENSMUST00000111438 BC025446A0A087WQT1 134 aa13.11□□□□□ -0.31
Ddx55-202ENSMUST00000111438 Gm45713A0A1B0GS68 446 aa13.11□□□□□ -0.31
Ddx55-202ENSMUST00000111438 Arhgef26D3YYY8 869 aa13.11□□□□□ -0.31
Ddx55-202ENSMUST00000111438 Tnfrsf18O35714 228 aa13.11□□□□□ -0.31
Ddx55-202ENSMUST00000111438 Aoc3O70423 765 aa13.11□□□□□ -0.31
Ddx55-202ENSMUST00000111438 Nub1P54729 614 aa13.11□□□□□ -0.31
Ddx55-202ENSMUST00000111438 Acbd5Q5XG73 508 aa13.11□□□□□ -0.31
Ddx55-202ENSMUST00000111438 ItgaeQ60677 1167 aa13.11□□□□□ -0.31
Ddx55-202ENSMUST00000111438 Lrig3Q6P1C6 1117 aa13.11□□□□□ -0.31
Ddx55-202ENSMUST00000111438 MogsQ80UM7 834 aaKnown RBP13.11□□□□□ -0.31
Ddx55-202ENSMUST00000111438 Epn1Q80VP1 575 aa13.11□□□□□ -0.31
Ddx55-202ENSMUST00000111438 Wscd1Q80XH4 572 aa13.11□□□□□ -0.31
Ddx55-202ENSMUST00000111438 Slc2a12Q8BFW9 622 aa13.11□□□□□ -0.31
Ddx55-202ENSMUST00000111438 Cdk17Q8K0D0 523 aa13.11□□□□□ -0.31
Ddx55-202ENSMUST00000111438 Brd3Q8K2F0 726 aaKnown RBP13.11□□□□□ -0.31
Ddx55-202ENSMUST00000111438 AdigQ8R400 80 aa13.11□□□□□ -0.31
Ddx55-202ENSMUST00000111438 Cbwd1Q8VEH6 393 aa13.11□□□□□ -0.31
Ddx55-202ENSMUST00000111438 GzmnQ920S1 248 aa13.11□□□□□ -0.31
Ddx55-202ENSMUST00000111438 PirQ9D711 290 aa13.11□□□□□ -0.31
Ddx55-202ENSMUST00000111438 Rnf138rt1Q9D9M9 248 aa13.11□□□□□ -0.31
Ddx55-202ENSMUST00000111438 ByslO54825 436 aaKnown RBP13.1□□□□□ -0.31
Ddx55-202ENSMUST00000111438 DtnbO70585 659 aa13.1□□□□□ -0.31
Ddx55-202ENSMUST00000111438 Ercc5P35689 1170 aa13.1□□□□□ -0.31
Ddx55-202ENSMUST00000111438 NntQ61941 1086 aaKnown RBP13.1□□□□□ -0.31
Ddx55-202ENSMUST00000111438 Q66JV7 365 aa13.1□□□□□ -0.31
Ddx55-202ENSMUST00000111438 Lonp1Q8CGK3 949 aaKnown RBP13.1□□□□□ -0.31
Ddx55-202ENSMUST00000111438 Sept8Q8CHH9 429 aa13.1□□□□□ -0.31
Ddx55-202ENSMUST00000111438 Setd3Q91WC0 594 aa13.1□□□□□ -0.31
Ddx55-202ENSMUST00000111438 Vps36Q91XD6 386 aa13.1□□□□□ -0.31
Ddx55-202ENSMUST00000111438 Tlr3Q99MB1 905 aa13.1□□□□□ -0.31
Ddx55-202ENSMUST00000111438 Drap1Q9D6N5 205 aa13.1□□□□□ -0.31
Ddx55-202ENSMUST00000111438 Znf354bQ9QXT9 601 aa13.1□□□□□ -0.31
Ddx55-202ENSMUST00000111438 Fbxo17Q9QZM8 286 aa13.1□□□□□ -0.31
Ddx55-202ENSMUST00000111438 Kank3Q9Z1P7 791 aa13.1□□□□□ -0.31
Ddx55-202ENSMUST00000111438 Rp1l1Q8CGM2 1859 aa13.1□□□□□ -0.31
Ddx55-202ENSMUST00000111438 2210011C24RikA0A087WQ89 206 aa13.1□□□□□ -0.31
Ddx55-202ENSMUST00000111438 Gm3409A0A0G2JE67 319 aa13.1□□□□□ -0.31
Ddx55-202ENSMUST00000111438 Prdm12A2AJ77 365 aa13.1□□□□□ -0.31
Ddx55-202ENSMUST00000111438 TnfP06804 235 aa13.1□□□□□ -0.31
Ddx55-202ENSMUST00000111438 Pik3caP42337 1068 aa13.1□□□□□ -0.31
Ddx55-202ENSMUST00000111438 Chp1P61022 195 aa13.1□□□□□ -0.31
Ddx55-202ENSMUST00000111438 Q3TTJ4 293 aa13.1□□□□□ -0.31
Ddx55-202ENSMUST00000111438 Rapgef1Q3UHC1 1224 aa13.1□□□□□ -0.31
Ddx55-202ENSMUST00000111438 Bcar1Q61140 874 aa13.1□□□□□ -0.31
Ddx55-202ENSMUST00000111438 Crb2Q80YA8 1282 aa13.1□□□□□ -0.31
Ddx55-202ENSMUST00000111438 Etf1Q8BWY3 437 aaKnown RBP13.1□□□□□ -0.31
Ddx55-202ENSMUST00000111438 Spata4Q8K3V1 295 aa13.1□□□□□ -0.31
Ddx55-202ENSMUST00000111438 Q91Z58 1206 aa13.1□□□□□ -0.31
Ddx55-202ENSMUST00000111438 Map4k3Q99JP0 894 aa13.1□□□□□ -0.31
Ddx55-202ENSMUST00000111438 Fuca1Q99LJ1 452 aa13.1□□□□□ -0.31
Ddx55-202ENSMUST00000111438 Tmem39aQ9CYC3 486 aa13.1□□□□□ -0.31
Ddx55-202ENSMUST00000111438 Cndp2Q9D1A2 475 aaKnown RBP13.1□□□□□ -0.31
Ddx55-202ENSMUST00000111438 Hyou1Q9JKR6 999 aaKnown RBP13.1□□□□□ -0.31
Ddx55-202ENSMUST00000111438 Slc4a11A2AJN7 862 aa13.09□□□□□ -0.31
Ddx55-202ENSMUST00000111438 Zfp358E9Q8M1 571 aa13.09□□□□□ -0.31
Ddx55-202ENSMUST00000111438 Trim55G3X8Y1 545 aa13.09□□□□□ -0.31
Ddx55-202ENSMUST00000111438 Scgb2b19J3QM75 112 aa13.09□□□□□ -0.31
Ddx55-202ENSMUST00000111438 CcnoP0C242 352 aa13.09□□□□□ -0.31
Ddx55-202ENSMUST00000111438 Gpr25P0C5I1 358 aa13.09□□□□□ -0.31
Ddx55-202ENSMUST00000111438 Ptgs2Q05769 604 aa13.09□□□□□ -0.31
Ddx55-202ENSMUST00000111438 Trim72Q1XH17 477 aa13.09□□□□□ -0.31
Ddx55-202ENSMUST00000111438 Tas2r134Q7TQB0 298 aa13.09□□□□□ -0.31
Ddx55-202ENSMUST00000111438 Efcab8Q8C9R9 203 aa13.09□□□□□ -0.31
Ddx55-202ENSMUST00000111438 Polr2bQ8CFI7 1174 aaKnown RBP13.09□□□□□ -0.31
Ddx55-202ENSMUST00000111438 Gnl3Q8CI11 538 aaKnown RBP13.09□□□□□ -0.31
Ddx55-202ENSMUST00000111438 MutyhQ99P21 515 aa13.09□□□□□ -0.31
Ddx55-202ENSMUST00000111438 Slamf8Q9D3G2 278 aa13.09□□□□□ -0.31
Ddx55-202ENSMUST00000111438 Klhl40Q9D783 621 aa13.09□□□□□ -0.31
Ddx55-202ENSMUST00000111438 Trpc3Q9QZC1 836 aa13.09□□□□□ -0.31
Ddx55-202ENSMUST00000111438 Gm4846B2RWH8 538 aa13.09□□□□□ -0.31
Ddx55-202ENSMUST00000111438 Slc12a1P55014 1095 aa13.09□□□□□ -0.31
Ddx55-202ENSMUST00000111438 Sppl2bQ3TD49 578 aa13.09□□□□□ -0.31
Ddx55-202ENSMUST00000111438 Cracr2aQ3UP38 310 aa13.09□□□□□ -0.31
Ddx55-202ENSMUST00000111438 Dsg1aQ61495 1057 aa13.09□□□□□ -0.31
Ddx55-202ENSMUST00000111438 Trim25Q61510 634 aaKnown RBP13.09□□□□□ -0.31
Ddx55-202ENSMUST00000111438 Mettl25Q6NXH8 597 aa13.09□□□□□ -0.31
Ddx55-202ENSMUST00000111438 Daam2Q80U19 1115 aa13.09□□□□□ -0.31
Ddx55-202ENSMUST00000111438 GnsQ8BFR4 544 aa13.09□□□□□ -0.31
Ddx55-202ENSMUST00000111438 Maats1Q8BRC6 783 aa13.09□□□□□ -0.31
Ddx55-202ENSMUST00000111438 Stap2Q8R0L1 411 aa13.09□□□□□ -0.31
Ddx55-202ENSMUST00000111438 Vwa1Q8R2Z5 415 aa13.09□□□□□ -0.31
Ddx55-202ENSMUST00000111438 Olfr30Q8VGD8 315 aa13.09□□□□□ -0.31
Ddx55-202ENSMUST00000111438 Olfr385Q8VGT1 312 aa13.09□□□□□ -0.31
Ddx55-202ENSMUST00000111438 Sh2b1Q91ZM2 756 aa13.09□□□□□ -0.31
Ddx55-202ENSMUST00000111438 Gtf2h1Q9DBA9 547 aa13.09□□□□□ -0.31
Ddx55-202ENSMUST00000111438 Dkc1Q9ESX5 509 aaKnown RBP13.09□□□□□ -0.31
Ddx55-202ENSMUST00000111438 Osbpl7A2A716 963 aa13.08□□□□□ -0.32
Ddx55-202ENSMUST00000111438 Pex10B1AUE5 324 aa13.08□□□□□ -0.32
Ddx55-202ENSMUST00000111438 Gm10721J3QPJ9 223 aa13.08□□□□□ -0.32
Ddx55-202ENSMUST00000111438 Kcnu1O54982 1121 aa13.08□□□□□ -0.32
Ddx55-202ENSMUST00000111438 Myo1fP70248 1099 aa13.08□□□□□ -0.32
Ddx55-202ENSMUST00000111438 Fam109bQ14B98 259 aa13.08□□□□□ -0.32
Ddx55-202ENSMUST00000111438 Smarcal1Q8BJL0 910 aa13.08□□□□□ -0.32
Retrieved 100 of 22,080 RNA–protein pairs in 21.2 ms