RNA–Protein interactions for RNA: ENSMUST00000102774.10

Sqstm1-202, Transcript of Sequestosome-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sqstm1, Length 2,037 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sqstm1-202ENSMUST00000102774 Pafah1b1P63005 410 aaKnown RBP20.46■□□□□ 0.87
Sqstm1-202ENSMUST00000102774 Rad54lP70270 747 aa20.46■□□□□ 0.87
Sqstm1-202ENSMUST00000102774 Cdh8P97291 799 aa20.46■□□□□ 0.87
Sqstm1-202ENSMUST00000102774 Sh3bp2Q06649 559 aa20.46■□□□□ 0.87
Sqstm1-202ENSMUST00000102774 Frmd3Q8BHD4 595 aa20.46■□□□□ 0.87
Sqstm1-202ENSMUST00000102774 Serpina3bQ8BYY9 420 aa20.46■□□□□ 0.87
Sqstm1-202ENSMUST00000102774 Il17cQ8K4C5 194 aa20.46■□□□□ 0.87
Sqstm1-202ENSMUST00000102774 Alas1Q8VC19 642 aa20.46■□□□□ 0.87
Sqstm1-202ENSMUST00000102774 Chst12Q99LL3 419 aa20.46■□□□□ 0.87
Sqstm1-202ENSMUST00000102774 DcpsQ9DAR7 338 aa20.46■□□□□ 0.87
Sqstm1-202ENSMUST00000102774 Extl1Q9JKV7 669 aa20.46■□□□□ 0.87
Sqstm1-202ENSMUST00000102774 Sfmbt1Q9JMD1 863 aa20.46■□□□□ 0.87
Sqstm1-202ENSMUST00000102774 Kcnd2Q9Z0V2 630 aa20.46■□□□□ 0.87
Sqstm1-202ENSMUST00000102774 Casp8ap2Q9WUF3 1962 aa20.45■□□□□ 0.86
Sqstm1-202ENSMUST00000102774 Zfp358E9Q8M1 571 aa20.45■□□□□ 0.86
Sqstm1-202ENSMUST00000102774 Gm10721J3QPJ9 223 aa20.45■□□□□ 0.86
Sqstm1-202ENSMUST00000102774 Krt13P08730 437 aa20.45■□□□□ 0.86
Sqstm1-202ENSMUST00000102774 Slc12a1P55014 1095 aa20.45■□□□□ 0.86
Sqstm1-202ENSMUST00000102774 YwhaeP62259 255 aaKnown RBP20.45■□□□□ 0.86
Sqstm1-202ENSMUST00000102774 HmmrQ00547 794 aaKnown RBP20.45■□□□□ 0.86
Sqstm1-202ENSMUST00000102774 Cracr2aQ3UP38 310 aa20.45■□□□□ 0.86
Sqstm1-202ENSMUST00000102774 Krt35Q497I4 455 aa20.45■□□□□ 0.86
Sqstm1-202ENSMUST00000102774 Gprc5aQ8BHL4 356 aa20.45■□□□□ 0.86
Sqstm1-202ENSMUST00000102774 Smc1bQ920F6 1248 aa20.45■□□□□ 0.86
Sqstm1-202ENSMUST00000102774 4933406M09RikG3XA12 479 aa20.44■□□□□ 0.86
Sqstm1-202ENSMUST00000102774 Casp14O89094 257 aa20.44■□□□□ 0.86
Sqstm1-202ENSMUST00000102774 Tnnc1P19123 161 aa20.44■□□□□ 0.86
Sqstm1-202ENSMUST00000102774 Skap1Q3UUV5 355 aa20.44■□□□□ 0.86
Sqstm1-202ENSMUST00000102774 Dusp11Q6NXK5 321 aaKnown RBP20.44■□□□□ 0.86
Sqstm1-202ENSMUST00000102774 Tmem220Q8BP07 167 aa20.44■□□□□ 0.86
Sqstm1-202ENSMUST00000102774 Usp38Q8BW70 1042 aa20.44■□□□□ 0.86
Sqstm1-202ENSMUST00000102774 Ctnnbl1Q9CWL8 563 aaKnown RBP20.44■□□□□ 0.86
Sqstm1-202ENSMUST00000102774 IscuQ9D7P6 168 aa20.44■□□□□ 0.86
Sqstm1-202ENSMUST00000102774 Rnf138rt1Q9D9M9 248 aa20.44■□□□□ 0.86
Sqstm1-202ENSMUST00000102774 Galk1Q9R0N0 392 aa20.44■□□□□ 0.86
Sqstm1-202ENSMUST00000102774 Znf394Q9Z1D9 521 aa20.44■□□□□ 0.86
Sqstm1-202ENSMUST00000102774 Cntnap5aQ0V8T9 1304 aa20.44■□□□□ 0.86
Sqstm1-202ENSMUST00000102774 Kiaa0100Q5SYL3 2234 aa20.44■□□□□ 0.86
Sqstm1-202ENSMUST00000102774 Gm4756A0A140LIS8 335 aa20.44■□□□□ 0.86
Sqstm1-202ENSMUST00000102774 Fpr-rs4A4FUQ5 323 aa20.44■□□□□ 0.86
Sqstm1-202ENSMUST00000102774 Gm3127E9Q9P5 263 aa20.44■□□□□ 0.86
Sqstm1-202ENSMUST00000102774 Gm1758F6VZZ1 202 aa20.44■□□□□ 0.86
Sqstm1-202ENSMUST00000102774 Gm3453K7N724 263 aa20.44■□□□□ 0.86
Sqstm1-202ENSMUST00000102774 Dpep1P31428 410 aa20.44■□□□□ 0.86
Sqstm1-202ENSMUST00000102774 Aldh2P47738 519 aaKnown RBP20.44■□□□□ 0.86
Sqstm1-202ENSMUST00000102774 FpgsP48760 587 aa20.44■□□□□ 0.86
Sqstm1-202ENSMUST00000102774 Shmt1P50431 478 aa20.44■□□□□ 0.86
Sqstm1-202ENSMUST00000102774 Ppp1r12cQ3UMT1 782 aa20.44■□□□□ 0.86
Sqstm1-202ENSMUST00000102774 Ints2Q80UK8 1198 aa20.44■□□□□ 0.86
Sqstm1-202ENSMUST00000102774 Phc3Q8CHP6 981 aa20.44■□□□□ 0.86
Sqstm1-202ENSMUST00000102774 Commd10Q8JZY2 202 aa20.44■□□□□ 0.86
Sqstm1-202ENSMUST00000102774 Olfr30Q8VGD8 315 aa20.44■□□□□ 0.86
Sqstm1-202ENSMUST00000102774 TraipQ8VIG6 470 aa20.44■□□□□ 0.86
Sqstm1-202ENSMUST00000102774 Rbm42Q91V81 474 aaKnown RBP20.44■□□□□ 0.86
Sqstm1-202ENSMUST00000102774 DarsQ922B2 501 aaKnown RBP20.44■□□□□ 0.86
Sqstm1-202ENSMUST00000102774 Foxe3Q9QY14 288 aa20.44■□□□□ 0.86
Sqstm1-202ENSMUST00000102774 Wdr46Q9Z0H1 622 aaKnown RBP20.44■□□□□ 0.86
Sqstm1-202ENSMUST00000102774 Itgb3O54890 787 aa20.43■□□□□ 0.86
Sqstm1-202ENSMUST00000102774 Cetn1P41209 172 aa20.43■□□□□ 0.86
Sqstm1-202ENSMUST00000102774 Prdx5P99029 210 aa20.43■□□□□ 0.86
Sqstm1-202ENSMUST00000102774 SpdyaQ5IBH7 310 aa20.43■□□□□ 0.86
Sqstm1-202ENSMUST00000102774 Cct6bQ61390 531 aa20.43■□□□□ 0.86
Sqstm1-202ENSMUST00000102774 Mysm1Q69Z66 819 aa20.43■□□□□ 0.86
Sqstm1-202ENSMUST00000102774 Mpp4Q6P7F1 635 aa20.43■□□□□ 0.86
Sqstm1-202ENSMUST00000102774 Il33Q8BVZ5 266 aa20.43■□□□□ 0.86
Sqstm1-202ENSMUST00000102774 BbxQ8VBW5 907 aa20.43■□□□□ 0.86
Sqstm1-202ENSMUST00000102774 MiosQ8VE19 875 aa20.43■□□□□ 0.86
Sqstm1-202ENSMUST00000102774 Spata17Q9D552 379 aa20.43■□□□□ 0.86
Sqstm1-202ENSMUST00000102774 Tlr6Q9EPW9 795 aa20.43■□□□□ 0.86
Sqstm1-202ENSMUST00000102774 Krt17Q9QWL7 433 aa20.43■□□□□ 0.86
Sqstm1-202ENSMUST00000102774 Btbd18A0A0A6YY25 723 aa20.43■□□□□ 0.86
Sqstm1-202ENSMUST00000102774 Gm27029A2A4P4 543 aa20.43■□□□□ 0.86
Sqstm1-202ENSMUST00000102774 Trim30bE9PVL6 203 aa20.43■□□□□ 0.86
Sqstm1-202ENSMUST00000102774 Gjc1P28229 396 aa20.43■□□□□ 0.86
Sqstm1-202ENSMUST00000102774 P3h1Q3V1T4 739 aa20.43■□□□□ 0.86
Sqstm1-202ENSMUST00000102774 ChpfQ6IQX7 774 aa20.43■□□□□ 0.86
Sqstm1-202ENSMUST00000102774 1700001K19RikQ80ZT1 219 aa20.43■□□□□ 0.86
Sqstm1-202ENSMUST00000102774 Ttc39bQ8BYY4 617 aa20.43■□□□□ 0.86
Sqstm1-202ENSMUST00000102774 Syt15Q8C6N3 418 aa20.43■□□□□ 0.86
Sqstm1-202ENSMUST00000102774 Wdr11Q8K1X1 1223 aa20.43■□□□□ 0.86
Sqstm1-202ENSMUST00000102774 EpgnQ924X1 152 aa20.43■□□□□ 0.86
Sqstm1-202ENSMUST00000102774 Gm12394A2AKP6 982 aa20.42■□□□□ 0.86
Sqstm1-202ENSMUST00000102774 Abcb5B5X0E4 1255 aa20.42■□□□□ 0.86
Sqstm1-202ENSMUST00000102774 Acp4D3YTS9 425 aa20.42■□□□□ 0.86
Sqstm1-202ENSMUST00000102774 Gm3739L7N296 216 aa20.42■□□□□ 0.86
Sqstm1-202ENSMUST00000102774 Rrm1P07742 792 aa20.42■□□□□ 0.86
Sqstm1-202ENSMUST00000102774 Lrrc4bP0C192 709 aa20.42■□□□□ 0.86
Sqstm1-202ENSMUST00000102774 Ppp4r3cQ3V0Y1 813 aa20.42■□□□□ 0.86
Sqstm1-202ENSMUST00000102774 Znf235Q61116 645 aa20.42■□□□□ 0.86
Sqstm1-202ENSMUST00000102774 MogsQ80UM7 834 aaKnown RBP20.42■□□□□ 0.86
Sqstm1-202ENSMUST00000102774 Cnksr3Q8BMA3 555 aa20.42■□□□□ 0.86
Sqstm1-202ENSMUST00000102774 Ttc16Q8C1F5 767 aa20.42■□□□□ 0.86
Sqstm1-202ENSMUST00000102774 Fam78aQ8C552 283 aa20.42■□□□□ 0.86
Sqstm1-202ENSMUST00000102774 Ero1aQ8R180 464 aa20.42■□□□□ 0.86
Sqstm1-202ENSMUST00000102774 Slamf8Q9D3G2 278 aa20.42■□□□□ 0.86
Sqstm1-202ENSMUST00000102774 Scyl3Q9DBQ7 735 aa20.42■□□□□ 0.86
Sqstm1-202ENSMUST00000102774 Stk4Q9JI11 487 aa20.42■□□□□ 0.86
Sqstm1-202ENSMUST00000102774 Gm28036V9GXJ1 658 aa20.42■□□□□ 0.86
Sqstm1-202ENSMUST00000102774 Gm13941A2AJ38 245 aa20.41■□□□□ 0.86
Sqstm1-202ENSMUST00000102774 Cpsf2O35218 782 aaKnown RBP20.41■□□□□ 0.86
Retrieved 100 of 22,080 RNA–protein pairs in 16.6 ms