RNA–Protein interactions for RNA: ENSMUST00000097822.9

Ubr4-201, Transcript of E3 ubiquitin-protein ligase UBR4, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Ubr4, Length 15,928 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr4-201ENSMUST00000097822 Ccdc154Q6RUT8 657 aa6.29□□□□□ -1.4
Ubr4-201ENSMUST00000097822 Dna2Q6ZQJ5 1062 aa6.29□□□□□ -1.4
Ubr4-201ENSMUST00000097822 Ttc16Q8C1F5 767 aa6.29□□□□□ -1.4
Ubr4-201ENSMUST00000097822 Olfr805Q8VFI4 319 aa6.29□□□□□ -1.4
Ubr4-201ENSMUST00000097822 CalcbQ99MP3 130 aa6.29□□□□□ -1.4
Ubr4-201ENSMUST00000097822 Trpc7Q9WVC5 862 aa6.29□□□□□ -1.4
Ubr4-201ENSMUST00000097822 Kif14L0N7N1 1674 aaKnown RBP6.29□□□□□ -1.4
Ubr4-201ENSMUST00000097822 Hps1O08983 704 aa6.29□□□□□ -1.4
Ubr4-201ENSMUST00000097822 Kif1cO35071 1100 aaKnown RBP6.29□□□□□ -1.4
Ubr4-201ENSMUST00000097822 Pex26Q8BGI5 305 aa6.29□□□□□ -1.4
Ubr4-201ENSMUST00000097822 Ints5Q8CHT3 1018 aa6.29□□□□□ -1.4
Ubr4-201ENSMUST00000097822 Dennd4bQ3U1Y4 1499 aa6.29□□□□□ -1.4
Ubr4-201ENSMUST00000097822 Kpna2P52293 529 aaKnown RBP6.29□□□□□ -1.4
Ubr4-201ENSMUST00000097822 Aars2Q14CH7 980 aa6.29□□□□□ -1.4
Ubr4-201ENSMUST00000097822 Klra3Q64329 266 aa6.29□□□□□ -1.4
Ubr4-201ENSMUST00000097822 Ddx18Q8K363 660 aaKnown RBP6.29□□□□□ -1.4
Ubr4-201ENSMUST00000097822 Bbs2Q9CWF6 721 aa6.29□□□□□ -1.4
Ubr4-201ENSMUST00000097822 Dydc2Q9D3X8 139 aa6.29□□□□□ -1.4
Ubr4-201ENSMUST00000097822 Pcdh11xF6ZNL5 1338 aa6.29□□□□□ -1.4
Ubr4-201ENSMUST00000097822 Prex2Q3LAC4 1598 aa6.29□□□□□ -1.4
Ubr4-201ENSMUST00000097822 Mup5P11591 180 aa6.29□□□□□ -1.4
Ubr4-201ENSMUST00000097822 Sept1P42209 366 aa6.29□□□□□ -1.4
Ubr4-201ENSMUST00000097822 Dnal1Q05A62 190 aa6.29□□□□□ -1.4
Ubr4-201ENSMUST00000097822 RubcnlQ3TD16 648 aa6.29□□□□□ -1.4
Ubr4-201ENSMUST00000097822 Q3U4G0 281 aa6.29□□□□□ -1.4
Ubr4-201ENSMUST00000097822 9930111J21Rik1Q5SVP0 844 aa6.29□□□□□ -1.4
Ubr4-201ENSMUST00000097822 Ano5Q75UR0 904 aa6.29□□□□□ -1.4
Ubr4-201ENSMUST00000097822 Sox30Q8CGW4 782 aa6.29□□□□□ -1.4
Ubr4-201ENSMUST00000097822 Kcnq3Q8K3F6 873 aa6.29□□□□□ -1.4
Ubr4-201ENSMUST00000097822 Pcdhb12Q91Y07 789 aa6.29□□□□□ -1.4
Ubr4-201ENSMUST00000097822 Cse1lQ9ERK4 971 aaKnown RBP6.29□□□□□ -1.4
Ubr4-201ENSMUST00000097822 Cxcl11Q9JHH5 100 aa6.29□□□□□ -1.4
Ubr4-201ENSMUST00000097822 Cyp3a13Q64464 503 aa6.29□□□□□ -1.4
Ubr4-201ENSMUST00000097822 Appl2Q8K3G9 662 aa6.29□□□□□ -1.4
Ubr4-201ENSMUST00000097822 Dpp3Q99KK7 738 aa6.29□□□□□ -1.4
Ubr4-201ENSMUST00000097822 Krtap5-3Q9D226 196 aa6.29□□□□□ -1.4
Ubr4-201ENSMUST00000097822 Kat2aQ9JHD2 830 aa6.29□□□□□ -1.4
Ubr4-201ENSMUST00000097822 Gpc6Q9R087 555 aa6.29□□□□□ -1.4
Ubr4-201ENSMUST00000097822 Klhl33G3UW92 533 aa6.29□□□□□ -1.4
Ubr4-201ENSMUST00000097822 Kifc3O35231 824 aa6.29□□□□□ -1.4
Ubr4-201ENSMUST00000097822 Sema4aQ62178 760 aa6.29□□□□□ -1.4
Ubr4-201ENSMUST00000097822 SnrpaQ62189 287 aaKnown RBP6.29□□□□□ -1.4
Ubr4-201ENSMUST00000097822 Snx19Q6P4T1 997 aa6.29□□□□□ -1.4
Ubr4-201ENSMUST00000097822 Bend6Q6PFX2 281 aa6.29□□□□□ -1.4
Ubr4-201ENSMUST00000097822 Tmem59lQ7TNI2 337 aa6.29□□□□□ -1.4
Ubr4-201ENSMUST00000097822 Otop3Q80UF9 577 aa6.29□□□□□ -1.4
Ubr4-201ENSMUST00000097822 Zfp454Q80Y34 536 aa6.29□□□□□ -1.4
Ubr4-201ENSMUST00000097822 Nars2Q8BGV0 477 aa6.29□□□□□ -1.4
Ubr4-201ENSMUST00000097822 Pdpk1Q9Z2A0 559 aa6.29□□□□□ -1.4
Ubr4-201ENSMUST00000097822 Osbpl8B9EJ86 889 aa6.29□□□□□ -1.4
Ubr4-201ENSMUST00000097822 Gm8267E9Q207 261 aa6.29□□□□□ -1.4
Ubr4-201ENSMUST00000097822 MntO08789 591 aa6.29□□□□□ -1.4
Ubr4-201ENSMUST00000097822 AcadsQ07417 412 aaKnown RBP6.29□□□□□ -1.4
Ubr4-201ENSMUST00000097822 DselQ0VBN2 1207 aa6.29□□□□□ -1.4
Ubr4-201ENSMUST00000097822 Pcgf5Q3UK78 256 aa6.29□□□□□ -1.4
Ubr4-201ENSMUST00000097822 PhgdhQ61753 533 aaKnown RBP6.29□□□□□ -1.4
Ubr4-201ENSMUST00000097822 Gtse1Q8R080 741 aa6.29□□□□□ -1.4
Ubr4-201ENSMUST00000097822 Ncam1P13595 1115 aa6.29□□□□□ -1.4
Ubr4-201ENSMUST00000097822 Sfr1Q8BP27 319 aa6.29□□□□□ -1.4
Ubr4-201ENSMUST00000097822 Ccdc63Q8CDV6 558 aa6.29□□□□□ -1.4
Ubr4-201ENSMUST00000097822 Mill1Q8HWE7 395 aa6.29□□□□□ -1.4
Ubr4-201ENSMUST00000097822 Stx18Q8VDS8 334 aa6.29□□□□□ -1.4
Ubr4-201ENSMUST00000097822 Hmg20aQ9DC33 346 aa6.29□□□□□ -1.4
Ubr4-201ENSMUST00000097822 Uchl3Q9JKB1 230 aa6.29□□□□□ -1.4
Ubr4-201ENSMUST00000097822 Speer4cG3UXD1 256 aa6.28□□□□□ -1.4
Ubr4-201ENSMUST00000097822 Gm10354K7N6A0 256 aa6.28□□□□□ -1.4
Ubr4-201ENSMUST00000097822 Nedd8P29595 81 aa6.28□□□□□ -1.4
Ubr4-201ENSMUST00000097822 Eif4bQ8BGD9 611 aaKnown RBP6.28□□□□□ -1.4
Ubr4-201ENSMUST00000097822 Eno4Q8C042 619 aa6.28□□□□□ -1.4
Ubr4-201ENSMUST00000097822 Tesk2Q8VCT9 570 aa6.28□□□□□ -1.4
Ubr4-201ENSMUST00000097822 Itm2cQ91VK4 269 aa6.28□□□□□ -1.4
Ubr4-201ENSMUST00000097822 Rpn1Q91YQ5 608 aaKnown RBP6.28□□□□□ -1.4
Ubr4-201ENSMUST00000097822 Nxf1Q99JX7 618 aaKnown RBP6.28□□□□□ -1.4
Ubr4-201ENSMUST00000097822 Ndufa5Q9CPP6 116 aa6.28□□□□□ -1.4
Ubr4-201ENSMUST00000097822 1700029H14RikE9PY36 240 aa6.28□□□□□ -1.4
Ubr4-201ENSMUST00000097822 Map4k1P70218 827 aa6.28□□□□□ -1.4
Ubr4-201ENSMUST00000097822 Gjb4Q02738 266 aa6.28□□□□□ -1.4
Ubr4-201ENSMUST00000097822 Wasf2Q8BH43 497 aa6.28□□□□□ -1.4
Ubr4-201ENSMUST00000097822 Arhgef7Q9ES28 862 aa6.28□□□□□ -1.4
Ubr4-201ENSMUST00000097822 Epb41l3Q9WV92 929 aa6.28□□□□□ -1.4
Ubr4-201ENSMUST00000097822 Pdcd11Q6NS46 1862 aaKnown RBP6.28□□□□□ -1.4
Ubr4-201ENSMUST00000097822 Gm6370A0A0G2JGX9 315 aa6.28□□□□□ -1.4
Ubr4-201ENSMUST00000097822 Gm6309L7N481 315 aa6.28□□□□□ -1.4
Ubr4-201ENSMUST00000097822 Cdk7Q03147 346 aa6.28□□□□□ -1.4
Ubr4-201ENSMUST00000097822 Sp4Q62445 782 aa6.28□□□□□ -1.4
Ubr4-201ENSMUST00000097822 Senp6Q6P7W0 1132 aa6.28□□□□□ -1.4
Ubr4-201ENSMUST00000097822 Senp7Q8BUH8 1037 aa6.28□□□□□ -1.4
Ubr4-201ENSMUST00000097822 Fbxl5Q8C2S5 690 aa6.28□□□□□ -1.4
Ubr4-201ENSMUST00000097822 Zbed3Q9D0L1 228 aa6.28□□□□□ -1.4
Ubr4-201ENSMUST00000097822 Tomm20lQ9D4V6 152 aa6.28□□□□□ -1.4
Ubr4-201ENSMUST00000097822 Cdc42ep4Q9JM96 349 aaKnown RBP6.28□□□□□ -1.4
Ubr4-201ENSMUST00000097822 Tk2Q9R088 270 aa6.28□□□□□ -1.4
Ubr4-201ENSMUST00000097822 Orc6Q9WUJ8 262 aa6.28□□□□□ -1.4
Ubr4-201ENSMUST00000097822 Esp31A8R0W3 114 aa6.28□□□□□ -1.4
Ubr4-201ENSMUST00000097822 Zbtb11G5E8B9 1050 aaKnown RBP6.28□□□□□ -1.4
Ubr4-201ENSMUST00000097822 Hcn2O88703 863 aa6.28□□□□□ -1.4
Ubr4-201ENSMUST00000097822 Pdcd2P46718 343 aa6.28□□□□□ -1.4
Ubr4-201ENSMUST00000097822 Q3KNL4 93 aa6.28□□□□□ -1.4
Ubr4-201ENSMUST00000097822 Ddb1Q3U1J4 1140 aaKnown RBP6.28□□□□□ -1.4
Ubr4-201ENSMUST00000097822 Nmrk1Q91W63 195 aa6.28□□□□□ -1.4
Retrieved 100 of 22,080 RNA–protein pairs in 19.5 ms