RNA–Protein interactions for RNA: ENSMUST00000080860.12

Ccdc28a-202, Transcript of Coiled-coil domain-containing 28A, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc28a, Length 1,190 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28a-202ENSMUST00000080860 Ccdc173A0JLY1 547 aa13.12□□□□□ -0.31
Ccdc28a-202ENSMUST00000080860 Gm12695A2AGB2 545 aa13.12□□□□□ -0.31
Ccdc28a-202ENSMUST00000080860 Magea10A2AMW4 325 aa13.12□□□□□ -0.31
Ccdc28a-202ENSMUST00000080860 Gm10721J3QPJ9 223 aa13.12□□□□□ -0.31
Ccdc28a-202ENSMUST00000080860 Akap3O88987 864 aa13.12□□□□□ -0.31
Ccdc28a-202ENSMUST00000080860 GcP21614 476 aa13.12□□□□□ -0.31
Ccdc28a-202ENSMUST00000080860 Mcm5P49718 733 aa13.12□□□□□ -0.31
Ccdc28a-202ENSMUST00000080860 Slc7a1Q09143 622 aa13.12□□□□□ -0.31
Ccdc28a-202ENSMUST00000080860 Cpne7Q0VE82 557 aa13.12□□□□□ -0.31
Ccdc28a-202ENSMUST00000080860 UrgcpQ5NCI0 926 aa13.12□□□□□ -0.31
Ccdc28a-202ENSMUST00000080860 Cd6Q61003 665 aa13.12□□□□□ -0.31
Ccdc28a-202ENSMUST00000080860 PdgfrlQ6PE55 375 aa13.12□□□□□ -0.31
Ccdc28a-202ENSMUST00000080860 Paqr9Q6TCG2 375 aa13.12□□□□□ -0.31
Ccdc28a-202ENSMUST00000080860 Slc7a6osQ7TPE5 306 aa13.12□□□□□ -0.31
Ccdc28a-202ENSMUST00000080860 Olfr389Q7TRX7 312 aa13.12□□□□□ -0.31
Ccdc28a-202ENSMUST00000080860 Fam163bQ8BUM6 167 aa13.12□□□□□ -0.31
Ccdc28a-202ENSMUST00000080860 Rec8Q8C5S7 591 aa13.12□□□□□ -0.31
Ccdc28a-202ENSMUST00000080860 CrebrfQ8CDG5 640 aaKnown RBP13.12□□□□□ -0.31
Ccdc28a-202ENSMUST00000080860 Unc45bQ8CGY6 931 aaKnown RBP13.12□□□□□ -0.31
Ccdc28a-202ENSMUST00000080860 Syt12Q920N7 421 aa13.12□□□□□ -0.31
Ccdc28a-202ENSMUST00000080860 PirQ9D711 290 aa13.12□□□□□ -0.31
Ccdc28a-202ENSMUST00000080860 Serpinb12Q9D7P9 423 aa13.12□□□□□ -0.31
Ccdc28a-202ENSMUST00000080860 Rnf138rt1Q9D9M9 248 aa13.12□□□□□ -0.31
Ccdc28a-202ENSMUST00000080860 Tlr5Q9JLF7 859 aa13.12□□□□□ -0.31
Ccdc28a-202ENSMUST00000080860 Vnn1Q9Z0K8 512 aa13.12□□□□□ -0.31
Ccdc28a-202ENSMUST00000080860 CenpfE9Q3P4 2997 aaKnown RBP13.12□□□□□ -0.31
Ccdc28a-202ENSMUST00000080860 Sycp2lA0A0M3U1B0 842 aa13.11□□□□□ -0.31
Ccdc28a-202ENSMUST00000080860 Gm10110D3Z5M2 615 aa13.11□□□□□ -0.31
Ccdc28a-202ENSMUST00000080860 Gm3642K7N6V4 267 aa13.11□□□□□ -0.31
Ccdc28a-202ENSMUST00000080860 Tnfrsf11aO35305 625 aa13.11□□□□□ -0.31
Ccdc28a-202ENSMUST00000080860 Scrg1O88745 98 aa13.11□□□□□ -0.31
Ccdc28a-202ENSMUST00000080860 Vti1aO89116 217 aa13.11□□□□□ -0.31
Ccdc28a-202ENSMUST00000080860 Gas2P11862 314 aaKnown RBP13.11□□□□□ -0.31
Ccdc28a-202ENSMUST00000080860 Sash1P59808 1230 aa13.11□□□□□ -0.31
Ccdc28a-202ENSMUST00000080860 Ube2zQ3UE37 356 aa13.11□□□□□ -0.31
Ccdc28a-202ENSMUST00000080860 Frmd8Q3UFK8 466 aa13.11□□□□□ -0.31
Ccdc28a-202ENSMUST00000080860 Fam196aQ3USH1 422 aa13.11□□□□□ -0.31
Ccdc28a-202ENSMUST00000080860 Ttc9Q3V038 219 aa13.11□□□□□ -0.31
Ccdc28a-202ENSMUST00000080860 Nlrp14Q6B966 993 aa13.11□□□□□ -0.31
Ccdc28a-202ENSMUST00000080860 Slc39a10Q6P5F6 833 aa13.11□□□□□ -0.31
Ccdc28a-202ENSMUST00000080860 Pabpc4Q6PHQ9 660 aaKnown RBP13.11□□□□□ -0.31
Ccdc28a-202ENSMUST00000080860 Txndc16Q7TN22 820 aa13.11□□□□□ -0.31
Ccdc28a-202ENSMUST00000080860 Cep120Q7TSG1 988 aa13.11□□□□□ -0.31
Ccdc28a-202ENSMUST00000080860 Arl14epQ8BIX3 276 aa13.11□□□□□ -0.31
Ccdc28a-202ENSMUST00000080860 GancQ8BVW0 898 aa13.11□□□□□ -0.31
Ccdc28a-202ENSMUST00000080860 Wdr24Q8CFJ9 790 aa13.11□□□□□ -0.31
Ccdc28a-202ENSMUST00000080860 D8Ertd738eQ8R1F0 94 aa13.11□□□□□ -0.31
Ccdc28a-202ENSMUST00000080860 Rpl17Q9CPR4 184 aaKnown RBP13.11□□□□□ -0.31
Ccdc28a-202ENSMUST00000080860 Tpcn1Q9EQJ0 817 aa13.11□□□□□ -0.31
Ccdc28a-202ENSMUST00000080860 Habp4Q9JKS5 411 aaKnown RBP13.11□□□□□ -0.31
Ccdc28a-202ENSMUST00000080860 Prpf40aQ9R1C7 953 aaKnown RBP13.11□□□□□ -0.31
Ccdc28a-202ENSMUST00000080860 Atp6v0a1Q9Z1G4 839 aaKnown RBP13.11□□□□□ -0.31
Ccdc28a-202ENSMUST00000080860 Znf106O88466 1888 aa13.1□□□□□ -0.31
Ccdc28a-202ENSMUST00000080860 Arhgef37A1IGU4 676 aa13.1□□□□□ -0.31
Ccdc28a-202ENSMUST00000080860 Wfdc11A2A5H7 82 aa13.1□□□□□ -0.31
Ccdc28a-202ENSMUST00000080860 Gm4307E9PZY4 289 aa13.1□□□□□ -0.31
Ccdc28a-202ENSMUST00000080860 Gm4312K9J7E2 289 aa13.1□□□□□ -0.31
Ccdc28a-202ENSMUST00000080860 Aldh1a7O35945 501 aa13.1□□□□□ -0.31
Ccdc28a-202ENSMUST00000080860 AlbP07724 608 aa13.1□□□□□ -0.31
Ccdc28a-202ENSMUST00000080860 Kcnj4P52189 445 aa13.1□□□□□ -0.31
Ccdc28a-202ENSMUST00000080860 YwhahP68510 246 aaKnown RBP13.1□□□□□ -0.31
Ccdc28a-202ENSMUST00000080860 Tmprss15P97435 1069 aa13.1□□□□□ -0.31
Ccdc28a-202ENSMUST00000080860 CkbQ04447 381 aa13.1□□□□□ -0.31
Ccdc28a-202ENSMUST00000080860 Ssrp1Q08943 708 aaKnown RBP13.1□□□□□ -0.31
Ccdc28a-202ENSMUST00000080860 Prrt3Q6PE13 971 aa13.1□□□□□ -0.31
Ccdc28a-202ENSMUST00000080860 Cfap97Q6ZPR1 541 aa13.1□□□□□ -0.31
Ccdc28a-202ENSMUST00000080860 Dnajc16Q80TN4 772 aa13.1□□□□□ -0.31
Ccdc28a-202ENSMUST00000080860 Thnsl1Q8BH55 747 aa13.1□□□□□ -0.31
Ccdc28a-202ENSMUST00000080860 Wdr35Q8BND3 1181 aa13.1□□□□□ -0.31
Ccdc28a-202ENSMUST00000080860 Pdcd2lQ8C5N5 364 aa13.1□□□□□ -0.31
Ccdc28a-202ENSMUST00000080860 Zbtb6Q8K088 423 aa13.1□□□□□ -0.31
Ccdc28a-202ENSMUST00000080860 Pin4Q9CWW6 131 aa13.1□□□□□ -0.31
Ccdc28a-202ENSMUST00000080860 TsaccQ9DA44 124 aa13.1□□□□□ -0.31
Ccdc28a-202ENSMUST00000080860 Sfmbt1Q9JMD1 863 aa13.1□□□□□ -0.31
Ccdc28a-202ENSMUST00000080860 JmyQ9QXM1 983 aa13.1□□□□□ -0.31
Ccdc28a-202ENSMUST00000080860 Prmt2Q9R144 448 aa13.1□□□□□ -0.31
Ccdc28a-202ENSMUST00000080860 Large1Q9Z1M7 756 aa13.1□□□□□ -0.31
Ccdc28a-202ENSMUST00000080860 Igkv16-104A0A0B4J1I1 116 aa13.09□□□□□ -0.31
Ccdc28a-202ENSMUST00000080860 Fibcd1A2AV25 459 aa13.09□□□□□ -0.31
Ccdc28a-202ENSMUST00000080860 XntrpcF8VQM8 1264 aa13.09□□□□□ -0.31
Ccdc28a-202ENSMUST00000080860 Gm5571P01639 130 aa13.09□□□□□ -0.31
Ccdc28a-202ENSMUST00000080860 Tcf3P15806 651 aa13.09□□□□□ -0.31
Ccdc28a-202ENSMUST00000080860 Abcb4P21440 1276 aa13.09□□□□□ -0.31
Ccdc28a-202ENSMUST00000080860 Gdf7P43029 461 aa13.09□□□□□ -0.31
Ccdc28a-202ENSMUST00000080860 Ube2hP62257 183 aa13.09□□□□□ -0.31
Ccdc28a-202ENSMUST00000080860 Zscan4fQ3URS2 506 aa13.09□□□□□ -0.31
Ccdc28a-202ENSMUST00000080860 MyorgQ69ZQ1 716 aa13.09□□□□□ -0.31
Ccdc28a-202ENSMUST00000080860 Prmt8Q6PAK3 394 aa13.09□□□□□ -0.31
Ccdc28a-202ENSMUST00000080860 Zfp512bQ6PHP4 879 aa13.09□□□□□ -0.31
Ccdc28a-202ENSMUST00000080860 Slc41a2Q8BYR8 573 aa13.09□□□□□ -0.31
Ccdc28a-202ENSMUST00000080860 Ap3m2Q8R2R9 418 aa13.09□□□□□ -0.31
Ccdc28a-202ENSMUST00000080860 Wrnip1Q91XU0 660 aa13.09□□□□□ -0.31
Ccdc28a-202ENSMUST00000080860 CoasyQ9DBL7 563 aa13.09□□□□□ -0.31
Ccdc28a-202ENSMUST00000080860 Il17rbQ9JIP3 499 aa13.09□□□□□ -0.31
Ccdc28a-202ENSMUST00000080860 Smarcb1Q9Z0H3 385 aa13.09□□□□□ -0.31
Ccdc28a-202ENSMUST00000080860 Zfhx2Q2MHN3 2562 aa13.08□□□□□ -0.32
Ccdc28a-202ENSMUST00000080860 Cyp2j7A0A140T8U1 504 aa13.08□□□□□ -0.32
Ccdc28a-202ENSMUST00000080860 Acp4D3YTS9 425 aa13.08□□□□□ -0.32
Ccdc28a-202ENSMUST00000080860 Gm281D3Z1Y0 860 aa13.08□□□□□ -0.32
Ccdc28a-202ENSMUST00000080860 Gm4302E9PX25 294 aa13.08□□□□□ -0.32
Retrieved 100 of 22,080 RNA–protein pairs in 43.5 ms