RNA–Protein interactions for RNA: ENSMUST00000040182.12

Ccdc88a-201, Transcript of Girdin, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Ccdc88a, Length 9,376 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-201ENSMUST00000040182 Iqgap3F8VQ29 1632 aa17.34■□□□□ 0.37
Ccdc88a-201ENSMUST00000040182 Mageb5Q14AN0 366 aa17.34■□□□□ 0.37
Ccdc88a-201ENSMUST00000040182 SnrpaQ62189 287 aaKnown RBP17.34■□□□□ 0.37
Ccdc88a-201ENSMUST00000040182 Cwf19l1Q8CI33 537 aa17.34■□□□□ 0.37
Ccdc88a-201ENSMUST00000040182 Wdr91Q7TMQ7 748 aa17.34■□□□□ 0.37
Ccdc88a-201ENSMUST00000040182 XpotQ9CRT8 963 aa17.34■□□□□ 0.37
Ccdc88a-201ENSMUST00000040182 Lbhd1A0A087WPA0 259 aa17.34■□□□□ 0.37
Ccdc88a-201ENSMUST00000040182 Serpina16D3Z660 418 aa17.34■□□□□ 0.37
Ccdc88a-201ENSMUST00000040182 Gm3264L7N2C5 238 aa17.34■□□□□ 0.37
Ccdc88a-201ENSMUST00000040182 Vti1bO88384 232 aa17.34■□□□□ 0.37
Ccdc88a-201ENSMUST00000040182 Dynll1P63168 89 aa17.34■□□□□ 0.37
Ccdc88a-201ENSMUST00000040182 Nqo1Q64669 274 aa17.34■□□□□ 0.37
Ccdc88a-201ENSMUST00000040182 Atp5oQ9DB20 213 aaKnown RBP17.34■□□□□ 0.37
Ccdc88a-201ENSMUST00000040182 Kat6bQ8BRB7 1872 aa17.34■□□□□ 0.37
Ccdc88a-201ENSMUST00000040182 Flt1P35969 1333 aa17.34■□□□□ 0.37
Ccdc88a-201ENSMUST00000040182 Arpp19P56212 112 aaKnown RBP17.34■□□□□ 0.37
Ccdc88a-201ENSMUST00000040182 Pitpnm3Q3UHE1 974 aa17.34■□□□□ 0.37
Ccdc88a-201ENSMUST00000040182 Zc3h6Q8BYK8 1177 aa17.34■□□□□ 0.37
Ccdc88a-201ENSMUST00000040182 Olfr1494Q8VGP8 315 aa17.34■□□□□ 0.37
Ccdc88a-201ENSMUST00000040182 Ndufa10Q99LC3 355 aaKnown RBP17.34■□□□□ 0.37
Ccdc88a-201ENSMUST00000040182 Sapcd2Q9D818 391 aa17.34■□□□□ 0.37
Ccdc88a-201ENSMUST00000040182 Nr1h3Q9Z0Y9 445 aa17.34■□□□□ 0.37
Ccdc88a-201ENSMUST00000040182 StamP70297 548 aa17.34■□□□□ 0.37
Ccdc88a-201ENSMUST00000040182 Q14AM7 275 aa17.34■□□□□ 0.37
Ccdc88a-201ENSMUST00000040182 Rhobtb3Q9CTN4 611 aa17.34■□□□□ 0.37
Ccdc88a-201ENSMUST00000040182 Ap4s1Q9WVL1 144 aa17.34■□□□□ 0.37
Ccdc88a-201ENSMUST00000040182 Rims2Q9EQZ7 1530 aa17.34■□□□□ 0.37
Ccdc88a-201ENSMUST00000040182 Psma2P49722 234 aa17.33■□□□□ 0.37
Ccdc88a-201ENSMUST00000040182 Pcsk1P63239 753 aa17.33■□□□□ 0.37
Ccdc88a-201ENSMUST00000040182 Zfp263Q8CF60 680 aa17.33■□□□□ 0.37
Ccdc88a-201ENSMUST00000040182 Actl9Q8CG27 415 aa17.33■□□□□ 0.37
Ccdc88a-201ENSMUST00000040182 CenpsQ9D084 142 aa17.33■□□□□ 0.37
Ccdc88a-201ENSMUST00000040182 Atp13a1Q9EPE9 1200 aaKnown RBP17.33■□□□□ 0.37
Ccdc88a-201ENSMUST00000040182 PygmQ9WUB3 842 aaKnown RBP17.33■□□□□ 0.37
Ccdc88a-201ENSMUST00000040182 Trim43bP86448 445 aa17.33■□□□□ 0.37
Ccdc88a-201ENSMUST00000040182 Trim43cP86449 446 aa17.33■□□□□ 0.37
Ccdc88a-201ENSMUST00000040182 4930430A15RikQ05AC5 485 aa17.33■□□□□ 0.37
Ccdc88a-201ENSMUST00000040182 Ddx56Q9D0R4 546 aaKnown RBP17.33■□□□□ 0.37
Ccdc88a-201ENSMUST00000040182 Kiaa1551Q5DTW7 1521 aa17.33■□□□□ 0.37
Ccdc88a-201ENSMUST00000040182 RxrgP28705 463 aa17.33■□□□□ 0.37
Ccdc88a-201ENSMUST00000040182 Snx17Q8BVL3 470 aa17.33■□□□□ 0.37
Ccdc88a-201ENSMUST00000040182 Batf3Q9D275 118 aa17.33■□□□□ 0.37
Ccdc88a-201ENSMUST00000040182 Olfr711Q9EPG2 314 aa17.33■□□□□ 0.37
Ccdc88a-201ENSMUST00000040182 Olfm1O88998 485 aa17.33■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 Kcna5Q61762 602 aa17.33■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 Zcwpw1Q6IR42 630 aa17.33■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 Gadl1Q80WP8 550 aa17.33■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 Taf2Q8C176 1104 aa17.33■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 Psrc1Q9D0P7 329 aa17.33■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 Rnf123Q5XPI3 1314 aa17.33■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 Nol4P60954 483 aa17.33■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 Syce1lQ5D525 247 aa17.33■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 Stxbp2Q64324 593 aa17.33■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 Baiap2l2Q80Y61 522 aa17.33■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 Chn1Q91V57 459 aa17.33■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 Gm13084A2A8N0 494 aa17.33■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 Galnt3P70419 633 aa17.33■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 Polr1bP70700 1135 aa17.33■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 NfibP97863 570 aaKnown RBP17.33■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 Sgo2Q7TSY8 1164 aa17.33■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 Fam49aQ8BHZ0 323 aa17.33■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 PdxkQ8K183 312 aa17.33■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 Mapre2Q8R001 326 aa17.33■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 Magi2Q9WVQ1 1275 aa17.33■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 Akap1O08715 857 aaKnown RBP17.33■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 Lmntd2Q0VET5 664 aa17.33■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 Wbp4Q61048 376 aa17.33■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 AdgbG3UZ78 1657 aa17.33■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 Rab17P35292 214 aa17.33■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 FancbQ5XJY6 703 aa17.33■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 Ush1gQ80T11 461 aa17.33■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 Tex13c3Q810P0 219 aa17.33■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 Coro7Q9D2V7 922 aa17.33■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 Ccdc130Q9D516 385 aa17.33■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 Tmem120bQ3TA38 339 aa17.32■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 Dsg1aQ61495 1057 aa17.32■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 Micu3Q9CTY5 523 aa17.32■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 Ehbp1l1Q99MS7 1716 aa17.32■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 Ap1g2O88512 791 aa17.32■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 Eaf2Q91ZD6 262 aa17.32■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 Kif13aQ9EQW7 1749 aa17.32■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 Man1a1P45700 655 aa17.32■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 Mapk1P63085 358 aa17.32■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 Tigd5Q499M4 642 aa17.32■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 Lrrn2Q6PHP6 730 aa17.32■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 Sfr1Q8BP27 319 aa17.32■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 4932414N04RikQ8CEQ9 752 aa17.32■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 B3galt6Q91Z92 325 aa17.32■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 Xpo6Q924Z6 1125 aa17.32■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 Gm29554A0A087WNW4 188 aa17.32■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 MybP06876 636 aa17.32■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 Serping1P97290 504 aa17.32■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 CcnjlQ5SRT8 387 aa17.32■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 Krt31Q61765 416 aa17.32■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 Tfe3Q64092 572 aaKnown RBP17.32■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 4921511C20RikQ8BVT7 469 aa17.32■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 Pak5Q8C015 719 aa17.32■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 Rpf2Q9JJ80 306 aaKnown RBP17.32■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 Eya4Q9Z191 616 aa17.32■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 Cdh18E9Q9Q6 790 aa17.32■□□□□ 0.36
Retrieved 100 of 22,080 RNA–protein pairs in 20.2 ms