RNA–Protein interactions for RNA: ENSMUST00000034060.6

Sh3rf1-201, Transcript of E3 ubiquitin-protein ligase SH3RF1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sh3rf1, Length 5,479 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf1-201ENSMUST00000034060 Olfr1416Q8VGU4 312 aa24.24■■□□□ 1.47
Sh3rf1-201ENSMUST00000034060 Pcdhb11Q91UZ8 797 aa24.24■■□□□ 1.47
Sh3rf1-201ENSMUST00000034060 Ascc2Q91WR3 749 aa24.24■■□□□ 1.47
Sh3rf1-201ENSMUST00000034060 P01734 135 aa24.24■■□□□ 1.47
Sh3rf1-201ENSMUST00000034060 C2P21180 760 aa24.24■■□□□ 1.47
Sh3rf1-201ENSMUST00000034060 Nedd4P46935 887 aaKnown RBP24.24■■□□□ 1.47
Sh3rf1-201ENSMUST00000034060 Cyp3a13Q64464 503 aa24.24■■□□□ 1.47
Sh3rf1-201ENSMUST00000034060 Tmem117Q8BH18 514 aa24.24■■□□□ 1.47
Sh3rf1-201ENSMUST00000034060 Washc5Q8C2E7 1159 aaKnown RBP24.24■■□□□ 1.47
Sh3rf1-201ENSMUST00000034060 Fam162aQ9D6U8 155 aa24.24■■□□□ 1.47
Sh3rf1-201ENSMUST00000034060 Psmd12Q9D8W5 456 aa24.24■■□□□ 1.47
Sh3rf1-201ENSMUST00000034060 Gnrh1P13562 90 aa24.24■■□□□ 1.47
Sh3rf1-201ENSMUST00000034060 Gspt2Q149F3 632 aa24.24■■□□□ 1.47
Sh3rf1-201ENSMUST00000034060 Syce1lQ5D525 247 aa24.24■■□□□ 1.47
Sh3rf1-201ENSMUST00000034060 Fastkd1Q6DI86 829 aa24.24■■□□□ 1.47
Sh3rf1-201ENSMUST00000034060 Oip5A2AQ14 241 aa24.24■■□□□ 1.47
Sh3rf1-201ENSMUST00000034060 AK157302I3ITR1 129 aa24.24■■□□□ 1.47
Sh3rf1-201ENSMUST00000034060 Snap25P60879 206 aa24.24■■□□□ 1.47
Sh3rf1-201ENSMUST00000034060 Orc2Q60862 576 aaKnown RBP24.24■■□□□ 1.47
Sh3rf1-201ENSMUST00000034060 Krt73Q6NXH9 539 aa24.24■■□□□ 1.47
Sh3rf1-201ENSMUST00000034060 Celf4Q7TSY6 486 aa24.24■■□□□ 1.47
Sh3rf1-201ENSMUST00000034060 Iars2Q8BIJ6 1012 aa24.24■■□□□ 1.47
Sh3rf1-201ENSMUST00000034060 Dact1Q8R4A3 778 aa24.24■■□□□ 1.47
Sh3rf1-201ENSMUST00000034060 Isca1Q9D924 129 aa24.24■■□□□ 1.47
Sh3rf1-201ENSMUST00000034060 ParvbQ9ES46 365 aa24.24■■□□□ 1.47
Sh3rf1-201ENSMUST00000034060 Pdk2Q9JK42 407 aa24.24■■□□□ 1.47
Sh3rf1-201ENSMUST00000034060 NcaphQ8C156 731 aa24.23■■□□□ 1.47
Sh3rf1-201ENSMUST00000034060 Q8K2W9 541 aa24.23■■□□□ 1.47
Sh3rf1-201ENSMUST00000034060 Lonrf1D3YY23 762 aa24.23■■□□□ 1.47
Sh3rf1-201ENSMUST00000034060 CblP22682 913 aa24.23■■□□□ 1.47
Sh3rf1-201ENSMUST00000034060 Slfn1Q9Z0I7 337 aa24.23■■□□□ 1.47
Sh3rf1-201ENSMUST00000034060 Lrig3Q6P1C6 1117 aa24.23■■□□□ 1.47
Sh3rf1-201ENSMUST00000034060 Ccdc28bQ8CEG5 200 aa24.23■■□□□ 1.47
Sh3rf1-201ENSMUST00000034060 Stard7Q8R1R3 373 aa24.23■■□□□ 1.47
Sh3rf1-201ENSMUST00000034060 Psrc1Q9D0P7 329 aa24.23■■□□□ 1.47
Sh3rf1-201ENSMUST00000034060 RereQ80TZ9 1558 aa24.23■■□□□ 1.47
Sh3rf1-201ENSMUST00000034060 Ace3D0G895 737 aa24.23■■□□□ 1.47
Sh3rf1-201ENSMUST00000034060 Trim12cD3Z3L3 497 aa24.23■■□□□ 1.47
Sh3rf1-201ENSMUST00000034060 Wee1P47810 646 aa24.23■■□□□ 1.47
Sh3rf1-201ENSMUST00000034060 Mxi1P50540 228 aa24.23■■□□□ 1.47
Sh3rf1-201ENSMUST00000034060 ThraP63058 492 aa24.23■■□□□ 1.47
Sh3rf1-201ENSMUST00000034060 Cyfip1Q7TMB8 1253 aa24.23■■□□□ 1.47
Sh3rf1-201ENSMUST00000034060 Slc38a7Q8BWH0 463 aa24.23■■□□□ 1.47
Sh3rf1-201ENSMUST00000034060 Slc35g1Q8BY79 368 aa24.23■■□□□ 1.47
Sh3rf1-201ENSMUST00000034060 Traf7Q922B6 594 aa24.23■■□□□ 1.47
Sh3rf1-201ENSMUST00000034060 Katnal2Q9D3R6 539 aa24.23■■□□□ 1.47
Sh3rf1-201ENSMUST00000034060 Tdrd5Q5VCS6 1040 aa24.22■■□□□ 1.47
Sh3rf1-201ENSMUST00000034060 Wnk4Q80UE6 1222 aa24.22■■□□□ 1.47
Sh3rf1-201ENSMUST00000034060 Neu2Q9JMH3 379 aa24.22■■□□□ 1.47
Sh3rf1-201ENSMUST00000034060 Naaladl2A0A0N4SUJ3 795 aa24.22■■□□□ 1.47
Sh3rf1-201ENSMUST00000034060 Kifc3O35231 824 aa24.22■■□□□ 1.47
Sh3rf1-201ENSMUST00000034060 Gnat1P20612 350 aa24.22■■□□□ 1.47
Sh3rf1-201ENSMUST00000034060 Ccdc51Q3URS9 406 aa24.22■■□□□ 1.47
Sh3rf1-201ENSMUST00000034060 Bcap31Q61335 245 aa24.22■■□□□ 1.47
Sh3rf1-201ENSMUST00000034060 Capn11Q6J756 714 aa24.22■■□□□ 1.47
Sh3rf1-201ENSMUST00000034060 Skida1Q80YR3 822 aa24.22■■□□□ 1.47
Sh3rf1-201ENSMUST00000034060 Abcf3Q8K268 709 aa24.22■■□□□ 1.47
Sh3rf1-201ENSMUST00000034060 Slc8a2Q8K596 921 aa24.22■■□□□ 1.47
Sh3rf1-201ENSMUST00000034060 Ptk2bQ9QVP9 1009 aa24.22■■□□□ 1.47
Sh3rf1-201ENSMUST00000034060 Adad1Q5SUE7 619 aa24.22■■□□□ 1.47
Sh3rf1-201ENSMUST00000034060 AopepQ8BXQ6 817 aa24.22■■□□□ 1.47
Sh3rf1-201ENSMUST00000034060 Prkag2Q91WG5 566 aa24.22■■□□□ 1.47
Sh3rf1-201ENSMUST00000034060 Psmc3O88685 442 aa24.22■■□□□ 1.47
Sh3rf1-201ENSMUST00000034060 Il17raQ60943 864 aa24.22■■□□□ 1.47
Sh3rf1-201ENSMUST00000034060 ItchQ8C863 864 aa24.22■■□□□ 1.47
Sh3rf1-201ENSMUST00000034060 Agr3Q8R3W7 165 aa24.22■■□□□ 1.47
Sh3rf1-201ENSMUST00000034060 RnmtQ9D0L8 465 aaKnown RBP24.22■■□□□ 1.47
Sh3rf1-201ENSMUST00000034060 FignQ9ERZ6 759 aa24.22■■□□□ 1.47
Sh3rf1-201ENSMUST00000034060 Vcpip1Q8CDG3 1220 aa24.21■■□□□ 1.47
Sh3rf1-201ENSMUST00000034060 Hacd3Q8K2C9 362 aa24.21■■□□□ 1.47
Sh3rf1-201ENSMUST00000034060 Mtmr1Q9Z2C4 669 aa24.21■■□□□ 1.47
Sh3rf1-201ENSMUST00000034060 PtpruB1AUH1 1446 aa24.21■■□□□ 1.47
Sh3rf1-201ENSMUST00000034060 Gm10392Q3V3I3 114 aa24.21■■□□□ 1.47
Sh3rf1-201ENSMUST00000034060 Skiv2lQ6NZR5 1244 aa24.21■■□□□ 1.47
Sh3rf1-201ENSMUST00000034060 Nmt1O70310 496 aaKnown RBP24.21■■□□□ 1.47
Sh3rf1-201ENSMUST00000034060 ProcP33587 460 aa24.21■■□□□ 1.47
Sh3rf1-201ENSMUST00000034060 Apoa1Q00623 264 aa24.21■■□□□ 1.47
Sh3rf1-201ENSMUST00000034060 Klra9Q2TJJ8 266 aa24.21■■□□□ 1.47
Sh3rf1-201ENSMUST00000034060 Phc1Q64028 1012 aa24.21■■□□□ 1.47
Sh3rf1-201ENSMUST00000034060 Mindy1Q76LS9 468 aa24.21■■□□□ 1.47
Sh3rf1-201ENSMUST00000034060 Baiap2l2Q80Y61 522 aa24.21■■□□□ 1.47
Sh3rf1-201ENSMUST00000034060 Unc5bQ8K1S3 945 aa24.21■■□□□ 1.47
Sh3rf1-201ENSMUST00000034060 Rfc4Q99J62 364 aa24.21■■□□□ 1.47
Sh3rf1-201ENSMUST00000034060 Klhl28Q9CR40 571 aa24.21■■□□□ 1.47
Sh3rf1-201ENSMUST00000034060 Mageb2A2AHM0 380 aa24.21■■□□□ 1.47
Sh3rf1-201ENSMUST00000034060 Crabp2P22935 138 aa24.21■■□□□ 1.47
Sh3rf1-201ENSMUST00000034060 Ddx17Q501J6 650 aaKnown RBP24.21■■□□□ 1.47
Sh3rf1-201ENSMUST00000034060 Cnot7Q60809 285 aa24.21■■□□□ 1.47
Sh3rf1-201ENSMUST00000034060 Ccdc134Q8C7V8 229 aa24.21■■□□□ 1.47
Sh3rf1-201ENSMUST00000034060 Uchl3Q9JKB1 230 aa24.21■■□□□ 1.47
Sh3rf1-201ENSMUST00000034060 Mfsd4b4J3QNS5 503 aa24.21■■□□□ 1.47
Sh3rf1-201ENSMUST00000034060 Zfp341Q6PGC9 846 aa24.21■■□□□ 1.47
Sh3rf1-201ENSMUST00000034060 Acot5Q6Q2Z6 421 aa24.21■■□□□ 1.47
Sh3rf1-201ENSMUST00000034060 Znf618Q80YY7 953 aaKnown RBP24.21■■□□□ 1.47
Sh3rf1-201ENSMUST00000034060 Fxr2Q9WVR4 673 aaKnown RBP24.21■■□□□ 1.47
Sh3rf1-201ENSMUST00000034060 Hmx1O70218 332 aa24.2■■□□□ 1.47
Sh3rf1-201ENSMUST00000034060 StamP70297 548 aa24.2■■□□□ 1.47
Sh3rf1-201ENSMUST00000034060 Usp50Q6P8X6 390 aa24.2■■□□□ 1.47
Sh3rf1-201ENSMUST00000034060 Vmn2r43Q80Z08 845 aa24.2■■□□□ 1.47
Sh3rf1-201ENSMUST00000034060 Ercc4Q9QZD4 917 aa24.2■■□□□ 1.47
Retrieved 100 of 22,080 RNA–protein pairs in 15.9 ms