RNA–Protein interactions for RNA: ENSMUST00000033158.5

Ubfd1-201, Transcript of Ubiquitin domain-containing protein UBFD1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ubfd1, Length 4,849 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1-201ENSMUST00000033158 Tdrd5Q5VCS6 1040 aa17.43■□□□□ 0.38
Ubfd1-201ENSMUST00000033158 Rab3ipQ68EF0 428 aa17.43■□□□□ 0.38
Ubfd1-201ENSMUST00000033158 Atxn2lQ7TQH0 1049 aaKnown RBP17.43■□□□□ 0.38
Ubfd1-201ENSMUST00000033158 Baiap2l2Q80Y61 522 aa17.43■□□□□ 0.38
Ubfd1-201ENSMUST00000033158 Tlk1Q8C0V0 766 aa17.43■□□□□ 0.38
Ubfd1-201ENSMUST00000033158 P3h2Q8CG71 703 aa17.43■□□□□ 0.38
Ubfd1-201ENSMUST00000033158 BfarQ8R079 450 aa17.43■□□□□ 0.38
Ubfd1-201ENSMUST00000033158 Slc44a4Q91VA1 707 aa17.43■□□□□ 0.38
Ubfd1-201ENSMUST00000033158 Cyp2c50Q91X77 490 aa17.43■□□□□ 0.38
Ubfd1-201ENSMUST00000033158 Nudt12Q9DCN1 462 aa17.43■□□□□ 0.38
Ubfd1-201ENSMUST00000033158 Farp1F8VPU2 1048 aa17.42■□□□□ 0.38
Ubfd1-201ENSMUST00000033158 Hcn2O88703 863 aa17.42■□□□□ 0.38
Ubfd1-201ENSMUST00000033158 Irf8P23611 424 aa17.42■□□□□ 0.38
Ubfd1-201ENSMUST00000033158 Anxa5P48036 319 aa17.42■□□□□ 0.38
Ubfd1-201ENSMUST00000033158 Fgfr4Q03142 799 aa17.42■□□□□ 0.38
Ubfd1-201ENSMUST00000033158 Pacsin1Q61644 441 aa17.42■□□□□ 0.38
Ubfd1-201ENSMUST00000033158 Zrsr1Q64707 428 aa17.42■□□□□ 0.38
Ubfd1-201ENSMUST00000033158 Ephx4Q6IE26 359 aa17.42■□□□□ 0.38
Ubfd1-201ENSMUST00000033158 Cnbd2Q9D5U8 673 aa17.42■□□□□ 0.38
Ubfd1-201ENSMUST00000033158 Morc1Q9WVL5 950 aa17.42■□□□□ 0.38
Ubfd1-201ENSMUST00000033158 Lrrc6O88978 473 aa17.42■□□□□ 0.38
Ubfd1-201ENSMUST00000033158 Pstpip1P97814 415 aa17.42■□□□□ 0.38
Ubfd1-201ENSMUST00000033158 Fam118bQ8C569 351 aa17.42■□□□□ 0.38
Ubfd1-201ENSMUST00000033158 Pnma3Q8JZW8 466 aa17.42■□□□□ 0.38
Ubfd1-201ENSMUST00000033158 Mccc1Q99MR8 717 aa17.42■□□□□ 0.38
Ubfd1-201ENSMUST00000033158 Osbpl7A2A716 963 aa17.42■□□□□ 0.38
Ubfd1-201ENSMUST00000033158 Serpinb9O08797 374 aa17.42■□□□□ 0.38
Ubfd1-201ENSMUST00000033158 Lrrc23O35125 340 aa17.42■□□□□ 0.38
Ubfd1-201ENSMUST00000033158 Patl1Q3TC46 770 aaKnown RBP17.42■□□□□ 0.38
Ubfd1-201ENSMUST00000033158 Ankmy2Q3TPE9 440 aa17.42■□□□□ 0.38
Ubfd1-201ENSMUST00000033158 GmncQ3URY2 333 aa17.42■□□□□ 0.38
Ubfd1-201ENSMUST00000033158 Sh3gl3Q62421 347 aa17.42■□□□□ 0.38
Ubfd1-201ENSMUST00000033158 Ccnt2Q7TQK0 723 aa17.42■□□□□ 0.38
Ubfd1-201ENSMUST00000033158 RbakQ8BQC8 711 aa17.42■□□□□ 0.38
Ubfd1-201ENSMUST00000033158 NcaphQ8C156 731 aa17.42■□□□□ 0.38
Ubfd1-201ENSMUST00000033158 E4f1Q8CCE9 783 aa17.42■□□□□ 0.38
Ubfd1-201ENSMUST00000033158 Cul3Q9JLV5 768 aa17.42■□□□□ 0.38
Ubfd1-201ENSMUST00000033158 Sec23aQ01405 765 aa17.42■□□□□ 0.38
Ubfd1-201ENSMUST00000033158 Stx3Q64704 289 aa17.42■□□□□ 0.38
Ubfd1-201ENSMUST00000033158 Clca4aQ6Q473 924 aa17.42■□□□□ 0.38
Ubfd1-201ENSMUST00000033158 Chmp2bQ8BJF9 213 aa17.42■□□□□ 0.38
Ubfd1-201ENSMUST00000033158 Pcdhb7Q8CDY9 829 aa17.42■□□□□ 0.38
Ubfd1-201ENSMUST00000033158 PalmdQ9JHU2 551 aa17.42■□□□□ 0.38
Ubfd1-201ENSMUST00000033158 Hic1Q9R1Y5 733 aa17.42■□□□□ 0.38
Ubfd1-201ENSMUST00000033158 Mroh1E0CZ22 1640 aa17.42■□□□□ 0.38
Ubfd1-201ENSMUST00000033158 Zmym2Q9CU65 1376 aa17.41■□□□□ 0.38
Ubfd1-201ENSMUST00000033158 Dhx35A2ACQ1 703 aaKnown RBP17.41■□□□□ 0.38
Ubfd1-201ENSMUST00000033158 Gm5689F6Y2A6 97 aa17.41■□□□□ 0.38
Ubfd1-201ENSMUST00000033158 Tmem120bQ3TA38 339 aa17.41■□□□□ 0.38
Ubfd1-201ENSMUST00000033158 DaglaQ6WQJ1 1044 aa17.41■□□□□ 0.38
Ubfd1-201ENSMUST00000033158 CenpuQ8C4M7 410 aa17.41■□□□□ 0.38
Ubfd1-201ENSMUST00000033158 Thg1lQ9CY52 298 aa17.41■□□□□ 0.38
Ubfd1-201ENSMUST00000033158 Vnn1Q9Z0K8 512 aa17.41■□□□□ 0.38
Ubfd1-201ENSMUST00000033158 Zfp846G3X996 541 aa17.41■□□□□ 0.38
Ubfd1-201ENSMUST00000033158 Klc2O88448 599 aa17.41■□□□□ 0.38
Ubfd1-201ENSMUST00000033158 Ap2a2P17427 938 aaKnown RBP17.41■□□□□ 0.38
Ubfd1-201ENSMUST00000033158 Pde6bP23440 856 aa17.41■□□□□ 0.38
Ubfd1-201ENSMUST00000033158 Ccndbp1Q3TVC7 356 aa17.41■□□□□ 0.38
Ubfd1-201ENSMUST00000033158 Ssxb10Q6XAR7 170 aa17.41■□□□□ 0.38
Ubfd1-201ENSMUST00000033158 Fbxo28Q8BIG4 368 aa17.41■□□□□ 0.38
Ubfd1-201ENSMUST00000033158 Rhpn2Q8BWR8 686 aa17.41■□□□□ 0.38
Ubfd1-201ENSMUST00000033158 Trim47Q8C0E3 641 aa17.41■□□□□ 0.38
Ubfd1-201ENSMUST00000033158 Ifi205aQ8CGE8 404 aa17.41■□□□□ 0.38
Ubfd1-201ENSMUST00000033158 Pex19Q8VCI5 299 aa17.41■□□□□ 0.38
Ubfd1-201ENSMUST00000033158 Mrpl2Q9D773 306 aaKnown RBP17.41■□□□□ 0.38
Ubfd1-201ENSMUST00000033158 Pde9aO70628 534 aa17.41■□□□□ 0.38
Ubfd1-201ENSMUST00000033158 GfapP03995 430 aa17.41■□□□□ 0.38
Ubfd1-201ENSMUST00000033158 Hoxb8P09632 243 aa17.41■□□□□ 0.38
Ubfd1-201ENSMUST00000033158 Rad54lP70270 747 aa17.41■□□□□ 0.38
Ubfd1-201ENSMUST00000033158 Zbtb5Q7TQG0 670 aa17.41■□□□□ 0.38
Ubfd1-201ENSMUST00000033158 Q8BGN9 141 aa17.41■□□□□ 0.38
Ubfd1-201ENSMUST00000033158 Gpt2Q8BGT5 522 aa17.41■□□□□ 0.38
Ubfd1-201ENSMUST00000033158 Tti1Q91V83 1085 aa17.41■□□□□ 0.38
Ubfd1-201ENSMUST00000033158 Slc25a38Q91XD8 326 aa17.41■□□□□ 0.38
Ubfd1-201ENSMUST00000033158 Elp3Q9CZX0 547 aa17.41■□□□□ 0.38
Ubfd1-201ENSMUST00000033158 Serpinb6cW4VSP4 379 aa17.41■□□□□ 0.38
Ubfd1-201ENSMUST00000033158 Erbb2P70424 1256 aa17.41■□□□□ 0.38
Ubfd1-201ENSMUST00000033158 Pcgf5Q3UK78 256 aa17.41■□□□□ 0.38
Ubfd1-201ENSMUST00000033158 Asnsd1Q8BFS9 627 aa17.41■□□□□ 0.38
Ubfd1-201ENSMUST00000033158 Slc25a24Q8BMD8 475 aa17.41■□□□□ 0.38
Ubfd1-201ENSMUST00000033158 Fam49bQ921M7 324 aa17.41■□□□□ 0.38
Ubfd1-201ENSMUST00000033158 Alg1Q921Q3 482 aa17.41■□□□□ 0.38
Ubfd1-201ENSMUST00000033158 Neu2Q9JMH3 379 aa17.41■□□□□ 0.38
Ubfd1-201ENSMUST00000033158 ShprhQ7TPQ3 1674 aa17.41■□□□□ 0.38
Ubfd1-201ENSMUST00000033158 Ifi206G3UZV2 921 aa17.4■□□□□ 0.38
Ubfd1-201ENSMUST00000033158 Fbxo39Q5NBU5 443 aa17.4■□□□□ 0.38
Ubfd1-201ENSMUST00000033158 Lrig3Q6P1C6 1117 aa17.4■□□□□ 0.38
Ubfd1-201ENSMUST00000033158 Rnf139Q7TMV1 668 aa17.4■□□□□ 0.38
Ubfd1-201ENSMUST00000033158 Polr2eQ80UW8 210 aaKnown RBP17.4■□□□□ 0.38
Ubfd1-201ENSMUST00000033158 PreplQ8C167 725 aa17.4■□□□□ 0.38
Ubfd1-201ENSMUST00000033158 LactbQ9EP89 551 aa17.4■□□□□ 0.38
Ubfd1-201ENSMUST00000033158 Akap17bA2A3V1 959 aa17.4■□□□□ 0.38
Ubfd1-201ENSMUST00000033158 Zmynd8A2A484 1235 aaKnown RBP17.4■□□□□ 0.38
Ubfd1-201ENSMUST00000033158 Xirp1O70373 1129 aa17.4■□□□□ 0.38
Ubfd1-201ENSMUST00000033158 Raver2Q7TPD6 673 aa17.4■□□□□ 0.38
Ubfd1-201ENSMUST00000033158 WhrnQ80VW5 918 aa17.4■□□□□ 0.38
Ubfd1-201ENSMUST00000033158 Trmt2aQ8BNV1 574 aaKnown RBP17.4■□□□□ 0.38
Ubfd1-201ENSMUST00000033158 Amz1Q8BVF9 502 aa17.4■□□□□ 0.38
Ubfd1-201ENSMUST00000033158 Ttc16Q8C1F5 767 aa17.4■□□□□ 0.38
Ubfd1-201ENSMUST00000033158 Rmnd1Q8CI78 450 aa17.4■□□□□ 0.38
Retrieved 100 of 22,080 RNA–protein pairs in 23.7 ms