RNA–Protein interactions for RNA: ENSMUST00000026008.7

Trim8-201, Transcript of Probable E3 ubiquitin-protein ligase TRIM8, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim8, Length 3,230 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim8-201ENSMUST00000026008 ClasrpQ8CFC7 668 aa17.34■□□□□ 0.37
Trim8-201ENSMUST00000026008 ItpkaQ8R071 459 aa17.34■□□□□ 0.37
Trim8-201ENSMUST00000026008 Rhobtb2Q91V93 728 aa17.34■□□□□ 0.37
Trim8-201ENSMUST00000026008 Bag2Q91YN9 210 aa17.34■□□□□ 0.37
Trim8-201ENSMUST00000026008 Gtf3c6Q9D8P7 227 aa17.34■□□□□ 0.37
Trim8-201ENSMUST00000026008 Cd70O55237 195 aa17.33■□□□□ 0.37
Trim8-201ENSMUST00000026008 Lmnb1P14733 588 aaKnown RBP17.33■□□□□ 0.37
Trim8-201ENSMUST00000026008 Zfp953Q3UPV7 304 aa17.33■□□□□ 0.37
Trim8-201ENSMUST00000026008 Tgfbrap1Q3UR70 860 aa17.33■□□□□ 0.37
Trim8-201ENSMUST00000026008 Stkld1Q80YS9 662 aa17.33■□□□□ 0.37
Trim8-201ENSMUST00000026008 Kdm4bQ91VY5 1086 aa17.33■□□□□ 0.37
Trim8-201ENSMUST00000026008 Kcnq4Q9JK97 696 aa17.33■□□□□ 0.37
Trim8-201ENSMUST00000026008 Hoxc13P50207 328 aa17.33■□□□□ 0.36
Trim8-201ENSMUST00000026008 Nrp1P97333 923 aa17.33■□□□□ 0.36
Trim8-201ENSMUST00000026008 Pou6f1Q07916 301 aa17.33■□□□□ 0.36
Trim8-201ENSMUST00000026008 Kmt5aQ2YDW7 349 aa17.33■□□□□ 0.36
Trim8-201ENSMUST00000026008 PtpreP49446 699 aa17.32■□□□□ 0.36
Trim8-201ENSMUST00000026008 Kcnn2P58390 839 aa17.32■□□□□ 0.36
Trim8-201ENSMUST00000026008 Gucy2fQ5SDA5 1108 aa17.32■□□□□ 0.36
Trim8-201ENSMUST00000026008 ChukQ60680 745 aa17.32■□□□□ 0.36
Trim8-201ENSMUST00000026008 Nipa1Q8BHK1 323 aa17.32■□□□□ 0.36
Trim8-201ENSMUST00000026008 Ankef1Q9D2J7 775 aa17.32■□□□□ 0.36
Trim8-201ENSMUST00000026008 Rad54lP70270 747 aa17.32■□□□□ 0.36
Trim8-201ENSMUST00000026008 Tgoln2Q62314 363 aa17.32■□□□□ 0.36
Trim8-201ENSMUST00000026008 Dync1li2Q6PDL0 492 aaKnown RBP17.32■□□□□ 0.36
Trim8-201ENSMUST00000026008 Wasf2Q8BH43 497 aa17.32■□□□□ 0.36
Trim8-201ENSMUST00000026008 Ago2Q8CJG0 860 aaKnown RBP17.32■□□□□ 0.36
Trim8-201ENSMUST00000026008 Hars2Q99KK9 505 aa17.32■□□□□ 0.36
Trim8-201ENSMUST00000026008 DmgdhQ9DBT9 869 aa17.32■□□□□ 0.36
Trim8-201ENSMUST00000026008 Myh9Q8VDD5 1960 aaKnown RBP17.32■□□□□ 0.36
Trim8-201ENSMUST00000026008 Apba3O88888 571 aa17.32■□□□□ 0.36
Trim8-201ENSMUST00000026008 PrkceP16054 737 aa17.32■□□□□ 0.36
Trim8-201ENSMUST00000026008 SnrpfP62307 86 aaKnown RBP17.32■□□□□ 0.36
Trim8-201ENSMUST00000026008 Slc8a1P70414 970 aa17.32■□□□□ 0.36
Trim8-201ENSMUST00000026008 Runx2Q08775 607 aa17.32■□□□□ 0.36
Trim8-201ENSMUST00000026008 Nat8lQ3UGX3 299 aa17.32■□□□□ 0.36
Trim8-201ENSMUST00000026008 Gbp4Q61107 620 aa17.32■□□□□ 0.36
Trim8-201ENSMUST00000026008 Vmn2r26Q6TAC4 855 aa17.32■□□□□ 0.36
Trim8-201ENSMUST00000026008 Ripk2P58801 539 aa17.31■□□□□ 0.36
Trim8-201ENSMUST00000026008 Ece1Q4PZA2 769 aa17.31■□□□□ 0.36
Trim8-201ENSMUST00000026008 Zbtb44Q8R0A2 453 aa17.31■□□□□ 0.36
Trim8-201ENSMUST00000026008 Ivns1abpQ920Q8 642 aa17.31■□□□□ 0.36
Trim8-201ENSMUST00000026008 Lrrc63A6H694 637 aa17.31■□□□□ 0.36
Trim8-201ENSMUST00000026008 RcvrnP34057 202 aa17.31■□□□□ 0.36
Trim8-201ENSMUST00000026008 Wnt10bP48614 389 aa17.31■□□□□ 0.36
Trim8-201ENSMUST00000026008 Pdlim7Q3TJD7 457 aa17.31■□□□□ 0.36
Trim8-201ENSMUST00000026008 A1cfQ5YD48 595 aa17.31■□□□□ 0.36
Trim8-201ENSMUST00000026008 Cdk5rap3Q99LM2 503 aa17.31■□□□□ 0.36
Trim8-201ENSMUST00000026008 Slc22a3Q9WTW5 551 aa17.31■□□□□ 0.36
Trim8-201ENSMUST00000026008 Cst8P32766 142 aa17.3■□□□□ 0.36
Trim8-201ENSMUST00000026008 Nub1P54729 614 aa17.3■□□□□ 0.36
Trim8-201ENSMUST00000026008 Ppm1jQ149T7 507 aa17.3■□□□□ 0.36
Trim8-201ENSMUST00000026008 Apol7cQ8C6E1 369 aa17.3■□□□□ 0.36
Trim8-201ENSMUST00000026008 PygmQ9WUB3 842 aaKnown RBP17.3■□□□□ 0.36
Trim8-201ENSMUST00000026008 Tnfrsf18O35714 228 aa17.3■□□□□ 0.36
Trim8-201ENSMUST00000026008 Akr1b7P21300 316 aa17.3■□□□□ 0.36
Trim8-201ENSMUST00000026008 Rbp3P49194 1234 aa17.3■□□□□ 0.36
Trim8-201ENSMUST00000026008 Stip1Q60864 543 aaKnown RBP17.3■□□□□ 0.36
Trim8-201ENSMUST00000026008 Bri3bpQ8BXV2 253 aa17.3■□□□□ 0.36
Trim8-201ENSMUST00000026008 Kdm1bQ8CIG3 826 aa17.3■□□□□ 0.36
Trim8-201ENSMUST00000026008 Snapc2Q91XA5 359 aa17.3■□□□□ 0.36
Trim8-201ENSMUST00000026008 Tdrd1Q99MV1 1172 aa17.3■□□□□ 0.36
Trim8-201ENSMUST00000026008 Setd6Q9CWY3 473 aa17.3■□□□□ 0.36
Trim8-201ENSMUST00000026008 ErmapQ9JLN5 566 aa17.3■□□□□ 0.36
Trim8-201ENSMUST00000026008 Myo5aQ99104 1853 aaKnown RBP17.3■□□□□ 0.36
Trim8-201ENSMUST00000026008 Ly75Q60767 1723 aa17.3■□□□□ 0.36
Trim8-201ENSMUST00000026008 Srsf11E9Q6E5 511 aaKnown RBP17.3■□□□□ 0.36
Trim8-201ENSMUST00000026008 ThbdP15306 577 aa17.3■□□□□ 0.36
Trim8-201ENSMUST00000026008 Fgfr1P16092 822 aa17.3■□□□□ 0.36
Trim8-201ENSMUST00000026008 Gad2P48320 585 aa17.3■□□□□ 0.36
Trim8-201ENSMUST00000026008 Spdye4aQ5IBH6 268 aa17.3■□□□□ 0.36
Trim8-201ENSMUST00000026008 Srd5a1Q68FF9 255 aa17.3■□□□□ 0.36
Trim8-201ENSMUST00000026008 Heatr3Q8BQM4 679 aa17.3■□□□□ 0.36
Trim8-201ENSMUST00000026008 Smtnl2Q8CI12 456 aa17.3■□□□□ 0.36
Trim8-201ENSMUST00000026008 Ddx39aQ8VDW0 427 aaKnown RBP17.3■□□□□ 0.36
Trim8-201ENSMUST00000026008 Serpinb3bQ9D1Q5 387 aa17.3■□□□□ 0.36
Trim8-201ENSMUST00000026008 Sgk1Q9WVC6 431 aa17.3■□□□□ 0.36
Trim8-201ENSMUST00000026008 Adamtsl1Q8BLI0 1745 aa17.3■□□□□ 0.36
Trim8-201ENSMUST00000026008 2210011C24RikA0A087WQ89 206 aa17.29■□□□□ 0.36
Trim8-201ENSMUST00000026008 JrklB2RRL2 523 aa17.29■□□□□ 0.36
Trim8-201ENSMUST00000026008 Zfp212G3X8R7 492 aa17.29■□□□□ 0.36
Trim8-201ENSMUST00000026008 Mybl1P51960 751 aa17.29■□□□□ 0.36
Trim8-201ENSMUST00000026008 Nlrp4fQ66X05 959 aa17.29■□□□□ 0.36
Trim8-201ENSMUST00000026008 Siglec10Q80ZE3 688 aa17.29■□□□□ 0.36
Trim8-201ENSMUST00000026008 Slc4a7Q8BTY2 1034 aa17.29■□□□□ 0.36
Trim8-201ENSMUST00000026008 Rpa1Q8VEE4 623 aaKnown RBP17.29■□□□□ 0.36
Trim8-201ENSMUST00000026008 Rpn1Q91YQ5 608 aaKnown RBP17.29■□□□□ 0.36
Trim8-201ENSMUST00000026008 NptxrQ99J85 493 aa17.29■□□□□ 0.36
Trim8-201ENSMUST00000026008 Clec4aQ9QZ15 238 aa17.29■□□□□ 0.36
Trim8-201ENSMUST00000026008 Mocs3A2BDX3 460 aaKnown RBP17.29■□□□□ 0.36
Trim8-201ENSMUST00000026008 Bace1P56818 501 aa17.29■□□□□ 0.36
Trim8-201ENSMUST00000026008 Pde1bQ01065 535 aa17.29■□□□□ 0.36
Trim8-201ENSMUST00000026008 SkiQ60698 725 aa17.29■□□□□ 0.36
Trim8-201ENSMUST00000026008 Phc1Q64028 1012 aa17.29■□□□□ 0.36
Trim8-201ENSMUST00000026008 Ddhd1Q80YA3 547 aa17.29■□□□□ 0.36
Trim8-201ENSMUST00000026008 Caskin2Q8VHK1 1201 aa17.29■□□□□ 0.36
Trim8-201ENSMUST00000026008 HlcsQ920N2 722 aa17.29■□□□□ 0.36
Trim8-201ENSMUST00000026008 Npm3Q9CPP0 175 aaKnown RBP17.29■□□□□ 0.36
Trim8-201ENSMUST00000026008 Rbp7Q9EPC5 134 aa17.29■□□□□ 0.36
Trim8-201ENSMUST00000026008 Ripor3A1L3T7 938 aa17.28■□□□□ 0.36
Retrieved 100 of 22,080 RNA–protein pairs in 56.7 ms