RNA–Protein interactions for RNA: ENSMUST00000020827.6

Rnft1-201, Transcript of E3 ubiquitin-protein ligase RNFT1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rnft1, Length 4,452 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnft1-201ENSMUST00000020827 Sh3rf1Q69ZI1 892 aa10.59□□□□□ -0.71
Rnft1-201ENSMUST00000020827 Lonp1Q8CGK3 949 aaKnown RBP10.59□□□□□ -0.71
Rnft1-201ENSMUST00000020827 LgsnQ8CIX8 563 aa10.59□□□□□ -0.71
Rnft1-201ENSMUST00000020827 Acap1Q8K2H4 740 aa10.59□□□□□ -0.71
Rnft1-201ENSMUST00000020827 Coro7Q9D2V7 922 aa10.59□□□□□ -0.71
Rnft1-201ENSMUST00000020827 4930449I24RikQ9D5E3 319 aa10.59□□□□□ -0.71
Rnft1-201ENSMUST00000020827 Trpc5Q9QX29 975 aa10.59□□□□□ -0.71
Rnft1-201ENSMUST00000020827 Nup205A0A0J9YUD5 2061 aaKnown RBP10.59□□□□□ -0.71
Rnft1-201ENSMUST00000020827 Calcoco2A2A6M5 331 aa10.59□□□□□ -0.71
Rnft1-201ENSMUST00000020827 Gm6121L7MUF1 212 aa10.59□□□□□ -0.71
Rnft1-201ENSMUST00000020827 Cbfa2t2O70374 594 aa10.59□□□□□ -0.71
Rnft1-201ENSMUST00000020827 Irx1P81068 480 aa10.59□□□□□ -0.71
Rnft1-201ENSMUST00000020827 Runx2Q08775 607 aa10.59□□□□□ -0.71
Rnft1-201ENSMUST00000020827 Ankmy2Q3TPE9 440 aa10.59□□□□□ -0.71
Rnft1-201ENSMUST00000020827 Hace1Q3U0D9 909 aa10.59□□□□□ -0.71
Rnft1-201ENSMUST00000020827 Oog4Q4G0C7 502 aa10.59□□□□□ -0.71
Rnft1-201ENSMUST00000020827 Zswim6Q80TB7 1207 aa10.59□□□□□ -0.71
Rnft1-201ENSMUST00000020827 Msantd4Q91YU3 345 aa10.59□□□□□ -0.71
Rnft1-201ENSMUST00000020827 Tmem81Q9D5K1 259 aa10.59□□□□□ -0.71
Rnft1-201ENSMUST00000020827 Plcg1Q62077 1302 aa10.59□□□□□ -0.71
Rnft1-201ENSMUST00000020827 Exoc4O35382 975 aa10.59□□□□□ -0.71
Rnft1-201ENSMUST00000020827 Eno1P17182 434 aaKnown RBP10.59□□□□□ -0.71
Rnft1-201ENSMUST00000020827 VimP20152 466 aaKnown RBP10.59□□□□□ -0.71
Rnft1-201ENSMUST00000020827 Il1rapl1P59823 695 aa10.59□□□□□ -0.71
Rnft1-201ENSMUST00000020827 Sh3bp2Q06649 559 aa10.59□□□□□ -0.71
Rnft1-201ENSMUST00000020827 Ndrg1Q62433 394 aa10.59□□□□□ -0.71
Rnft1-201ENSMUST00000020827 Git1Q68FF6 770 aa10.59□□□□□ -0.71
Rnft1-201ENSMUST00000020827 Prr18Q6PAN7 307 aa10.59□□□□□ -0.71
Rnft1-201ENSMUST00000020827 Trnp1Q80ZI1 223 aa10.59□□□□□ -0.71
Rnft1-201ENSMUST00000020827 Pgm5Q8BZF8 567 aa10.59□□□□□ -0.71
Rnft1-201ENSMUST00000020827 Tph2Q8CGV2 488 aa10.59□□□□□ -0.71
Rnft1-201ENSMUST00000020827 Abcf3Q8K268 709 aa10.59□□□□□ -0.71
Rnft1-201ENSMUST00000020827 Plcb4Q91UZ1 1175 aa10.59□□□□□ -0.71
Rnft1-201ENSMUST00000020827 Zkscan3Q91VW9 553 aa10.59□□□□□ -0.71
Rnft1-201ENSMUST00000020827 HgsQ99LI8 775 aa10.59□□□□□ -0.71
Rnft1-201ENSMUST00000020827 Fuca1Q99LJ1 452 aa10.59□□□□□ -0.71
Rnft1-201ENSMUST00000020827 Xab2Q9DCD2 855 aaKnown RBP10.59□□□□□ -0.71
Rnft1-201ENSMUST00000020827 Glt1d1A4FUP9 346 aa10.58□□□□□ -0.72
Rnft1-201ENSMUST00000020827 Pid1Q3UBG2 217 aa10.58□□□□□ -0.72
Rnft1-201ENSMUST00000020827 Q5XFZ0 217 aa10.58□□□□□ -0.72
Rnft1-201ENSMUST00000020827 PterQ60866 349 aa10.58□□□□□ -0.72
Rnft1-201ENSMUST00000020827 Znf507Q6ZPY5 941 aa10.58□□□□□ -0.72
Rnft1-201ENSMUST00000020827 Zfp120Q8BZW4 436 aa10.58□□□□□ -0.72
Rnft1-201ENSMUST00000020827 Lin9Q8C735 542 aa10.58□□□□□ -0.72
Rnft1-201ENSMUST00000020827 Uba3Q8C878 462 aa10.58□□□□□ -0.72
Rnft1-201ENSMUST00000020827 Rnf25Q9QZR0 456 aa10.58□□□□□ -0.72
Rnft1-201ENSMUST00000020827 Rev3lQ61493 3122 aa10.58□□□□□ -0.72
Rnft1-201ENSMUST00000020827 Zc3h12bG3X9I7 835 aa10.58□□□□□ -0.72
Rnft1-201ENSMUST00000020827 Cyp2c68K7N6C2 491 aa10.58□□□□□ -0.72
Rnft1-201ENSMUST00000020827 HcrtO55241 130 aa10.58□□□□□ -0.72
Rnft1-201ENSMUST00000020827 Kcnq1P97414 668 aa10.58□□□□□ -0.72
Rnft1-201ENSMUST00000020827 Zbtb14Q08376 449 aa10.58□□□□□ -0.72
Rnft1-201ENSMUST00000020827 Fam83hQ148V8 1209 aa10.58□□□□□ -0.72
Rnft1-201ENSMUST00000020827 Tex35Q14BK3 207 aa10.58□□□□□ -0.72
Rnft1-201ENSMUST00000020827 Oca2Q62052 833 aa10.58□□□□□ -0.72
Rnft1-201ENSMUST00000020827 Tbc1d22bQ80VE5 505 aa10.58□□□□□ -0.72
Rnft1-201ENSMUST00000020827 Dhx32Q8BZS9 744 aa10.58□□□□□ -0.72
Rnft1-201ENSMUST00000020827 Fbxl13Q8CDU4 790 aa10.58□□□□□ -0.72
Rnft1-201ENSMUST00000020827 Olfr390Q8VEZ7 311 aa10.58□□□□□ -0.72
Rnft1-201ENSMUST00000020827 Eif3hQ91WK2 352 aaKnown RBP10.58□□□□□ -0.72
Rnft1-201ENSMUST00000020827 TfQ921I1 697 aa10.58□□□□□ -0.72
Rnft1-201ENSMUST00000020827 Med15Q924H2 789 aa10.58□□□□□ -0.72
Rnft1-201ENSMUST00000020827 Rabgap1A2AWA9 1064 aa10.58□□□□□ -0.72
Rnft1-201ENSMUST00000020827 NumblO08919 604 aa10.58□□□□□ -0.72
Rnft1-201ENSMUST00000020827 Mark2Q05512 776 aa10.58□□□□□ -0.72
Rnft1-201ENSMUST00000020827 A1cfQ5YD48 595 aa10.58□□□□□ -0.72
Rnft1-201ENSMUST00000020827 Zswim5Q80TC6 1188 aa10.58□□□□□ -0.72
Rnft1-201ENSMUST00000020827 PorcnQ9JJJ7 461 aa10.58□□□□□ -0.72
Rnft1-201ENSMUST00000020827 PollQ9QXE2 573 aaKnown RBP10.58□□□□□ -0.72
Rnft1-201ENSMUST00000020827 Ggps1Q9WTN0 300 aa10.58□□□□□ -0.72
Rnft1-201ENSMUST00000020827 Tmem131O70472 1877 aa10.58□□□□□ -0.72
Rnft1-201ENSMUST00000020827 Kifc5bE9PUA5 672 aa10.58□□□□□ -0.72
Rnft1-201ENSMUST00000020827 Gm44503E9PYU5 387 aa10.58□□□□□ -0.72
Rnft1-201ENSMUST00000020827 Rgsl1H3BL40 1073 aa10.58□□□□□ -0.72
Rnft1-201ENSMUST00000020827 Hoxc6P10629 235 aa10.58□□□□□ -0.72
Rnft1-201ENSMUST00000020827 Lta4hP24527 611 aa10.58□□□□□ -0.72
Rnft1-201ENSMUST00000020827 Pla2g4eQ50L42 875 aa10.58□□□□□ -0.72
Rnft1-201ENSMUST00000020827 Ddr2Q62371 854 aa10.58□□□□□ -0.72
Rnft1-201ENSMUST00000020827 FAM120AQ6A0A9 1112 aaKnown RBP10.58□□□□□ -0.72
Rnft1-201ENSMUST00000020827 Nudt16Q6P3D0 195 aa10.58□□□□□ -0.72
Rnft1-201ENSMUST00000020827 C130026I21RikQ8C898 291 aa10.58□□□□□ -0.72
Rnft1-201ENSMUST00000020827 Bzw2Q91VK1 419 aaKnown RBP10.58□□□□□ -0.72
Rnft1-201ENSMUST00000020827 Nt5c1bQ91YE9 573 aa10.58□□□□□ -0.72
Rnft1-201ENSMUST00000020827 NelfcdQ922L6 591 aa10.58□□□□□ -0.72
Rnft1-201ENSMUST00000020827 Atp6v1e2Q9D593 226 aa10.58□□□□□ -0.72
Rnft1-201ENSMUST00000020827 1700031M16RikA0A087WSH0 82 aa10.57□□□□□ -0.72
Rnft1-201ENSMUST00000020827 Tmprss15P97435 1069 aa10.57□□□□□ -0.72
Rnft1-201ENSMUST00000020827 B3gntl1Q3U129 357 aa10.57□□□□□ -0.72
Rnft1-201ENSMUST00000020827 Nap1l4Q78ZA7 375 aaKnown RBP10.57□□□□□ -0.72
Rnft1-201ENSMUST00000020827 Slc20a2Q80UP8 656 aa10.57□□□□□ -0.72
Rnft1-201ENSMUST00000020827 Ppfia2Q8BSS9 1257 aa10.57□□□□□ -0.72
Rnft1-201ENSMUST00000020827 Ccdc134Q8C7V8 229 aa10.57□□□□□ -0.72
Rnft1-201ENSMUST00000020827 Klhl36Q8R124 613 aa10.57□□□□□ -0.72
Rnft1-201ENSMUST00000020827 Cul2Q9D4H8 745 aa10.57□□□□□ -0.72
Rnft1-201ENSMUST00000020827 FibpQ9JI19 357 aa10.57□□□□□ -0.72
Rnft1-201ENSMUST00000020827 Ripk3Q9QZL0 486 aa10.57□□□□□ -0.72
Rnft1-201ENSMUST00000020827 Nfs1Q9Z1J3 459 aa10.57□□□□□ -0.72
Rnft1-201ENSMUST00000020827 Myo10F8VQB6 2062 aa10.57□□□□□ -0.72
Rnft1-201ENSMUST00000020827 AspgA0JNU3 564 aa10.57□□□□□ -0.72
Rnft1-201ENSMUST00000020827 Fam171a2A2A699 822 aa10.57□□□□□ -0.72
Retrieved 100 of 22,080 RNA–protein pairs in 28.2 ms