RNA–Protein interactions for RNA: ENSMUST00000005705.7

Trim28-201, Transcript of Transcription intermediary factor 1-beta, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim28, Length 3,245 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28-201ENSMUST00000005705 HemgnQ9ERZ0 503 aa17.17■□□□□ 0.34
Trim28-201ENSMUST00000005705 Mpp2Q9WV34 552 aa17.17■□□□□ 0.34
Trim28-201ENSMUST00000005705 Gm4907B1AXB9 411 aa17.17■□□□□ 0.34
Trim28-201ENSMUST00000005705 NsfP46460 744 aa17.17■□□□□ 0.34
Trim28-201ENSMUST00000005705 rp9P97762 213 aa17.17■□□□□ 0.34
Trim28-201ENSMUST00000005705 Atp13a5Q3TYU2 1216 aa17.17■□□□□ 0.34
Trim28-201ENSMUST00000005705 Cyp2c67Q569X9 491 aa17.17■□□□□ 0.34
Trim28-201ENSMUST00000005705 Ccdc125Q5U465 500 aa17.17■□□□□ 0.34
Trim28-201ENSMUST00000005705 Ntrk3Q6VNS1 825 aa17.17■□□□□ 0.34
Trim28-201ENSMUST00000005705 Kbtbd3Q8BHI4 607 aa17.17■□□□□ 0.34
Trim28-201ENSMUST00000005705 Zfp120Q8BZW4 436 aa17.17■□□□□ 0.34
Trim28-201ENSMUST00000005705 Btbd9Q8C726 612 aa17.17■□□□□ 0.34
Trim28-201ENSMUST00000005705 Angel1Q8VCU0 667 aa17.17■□□□□ 0.34
Trim28-201ENSMUST00000005705 CrygnQ8VHL5 183 aa17.17■□□□□ 0.34
Trim28-201ENSMUST00000005705 Havcr2Q8VIM0 281 aa17.17■□□□□ 0.34
Trim28-201ENSMUST00000005705 Hdac9Q99N13 588 aa17.17■□□□□ 0.34
Trim28-201ENSMUST00000005705 Mrpl11Q9CQF0 192 aaKnown RBP17.17■□□□□ 0.34
Trim28-201ENSMUST00000005705 Htra2Q9JIY5 458 aa17.17■□□□□ 0.34
Trim28-201ENSMUST00000005705 Kif9Q9WV04 790 aa17.17■□□□□ 0.34
Trim28-201ENSMUST00000005705 Gimd1E9PW74 217 aa17.16■□□□□ 0.34
Trim28-201ENSMUST00000005705 Gm5795E9PZN8 263 aa17.16■□□□□ 0.34
Trim28-201ENSMUST00000005705 Pou6f1Q07916 301 aa17.16■□□□□ 0.34
Trim28-201ENSMUST00000005705 Hook3Q8BUK6 718 aa17.16■□□□□ 0.34
Trim28-201ENSMUST00000005705 Thumpd2Q9CZB3 528 aa17.16■□□□□ 0.34
Trim28-201ENSMUST00000005705 Pgm1Q9D0F9 562 aa17.16■□□□□ 0.34
Trim28-201ENSMUST00000005705 Cst12Q9DAN8 128 aa17.16■□□□□ 0.34
Trim28-201ENSMUST00000005705 Ecel1Q9JMI0 775 aa17.16■□□□□ 0.34
Trim28-201ENSMUST00000005705 Cxcr2P35343 359 aa17.16■□□□□ 0.34
Trim28-201ENSMUST00000005705 VdrP48281 422 aa17.16■□□□□ 0.34
Trim28-201ENSMUST00000005705 CtshP49935 333 aa17.16■□□□□ 0.34
Trim28-201ENSMUST00000005705 Drp2Q05AA6 957 aa17.16■□□□□ 0.34
Trim28-201ENSMUST00000005705 Fam193bQ3U2K0 892 aa17.16■□□□□ 0.34
Trim28-201ENSMUST00000005705 Ppp2r5cQ60996 524 aa17.16■□□□□ 0.34
Trim28-201ENSMUST00000005705 Siglec10Q80ZE3 688 aa17.16■□□□□ 0.34
Trim28-201ENSMUST00000005705 Sun2Q8BJS4 731 aa17.16■□□□□ 0.34
Trim28-201ENSMUST00000005705 Rcn2Q8BP92 320 aa17.16■□□□□ 0.34
Trim28-201ENSMUST00000005705 Bri3bpQ8BXV2 253 aa17.16■□□□□ 0.34
Trim28-201ENSMUST00000005705 Apol9bQ8C7I4 310 aa17.16■□□□□ 0.34
Trim28-201ENSMUST00000005705 Mill1Q8HWE7 395 aa17.16■□□□□ 0.34
Trim28-201ENSMUST00000005705 Apol9aQ8VDU3 310 aa17.16■□□□□ 0.34
Trim28-201ENSMUST00000005705 Abt1Q9QYL7 269 aaKnown RBP17.16■□□□□ 0.34
Trim28-201ENSMUST00000005705 Glt1d1A4FUP9 346 aa17.15■□□□□ 0.34
Trim28-201ENSMUST00000005705 Rfx8D3YU81 596 aa17.15■□□□□ 0.34
Trim28-201ENSMUST00000005705 Vmn2r63E9Q0K5 859 aa17.15■□□□□ 0.34
Trim28-201ENSMUST00000005705 Gm9268E9Q0M3 861 aa17.15■□□□□ 0.34
Trim28-201ENSMUST00000005705 Gm21973F6WEZ7 68 aa17.15■□□□□ 0.34
Trim28-201ENSMUST00000005705 Vmn2r62K7N712 859 aa17.15■□□□□ 0.34
Trim28-201ENSMUST00000005705 Ccng1P51945 294 aa17.15■□□□□ 0.34
Trim28-201ENSMUST00000005705 Ppp1r12cQ3UMT1 782 aa17.15■□□□□ 0.34
Trim28-201ENSMUST00000005705 Dsg1aQ61495 1057 aa17.15■□□□□ 0.34
Trim28-201ENSMUST00000005705 Ece2Q80Z60 881 aa17.15■□□□□ 0.34
Trim28-201ENSMUST00000005705 Lrrc8cQ8R502 803 aa17.15■□□□□ 0.34
Trim28-201ENSMUST00000005705 Tnpo2Q99LG2 887 aaKnown RBP17.15■□□□□ 0.34
Trim28-201ENSMUST00000005705 Nudt8Q9CR24 210 aa17.15■□□□□ 0.34
Trim28-201ENSMUST00000005705 Bpifb9bA2AJD1 591 aa17.15■□□□□ 0.34
Trim28-201ENSMUST00000005705 Lmnb1P14733 588 aaKnown RBP17.15■□□□□ 0.34
Trim28-201ENSMUST00000005705 HpdP49429 393 aa17.15■□□□□ 0.34
Trim28-201ENSMUST00000005705 Pla2g4cQ64GA5 597 aa17.15■□□□□ 0.34
Trim28-201ENSMUST00000005705 Klhdc10Q6PAR0 439 aa17.15■□□□□ 0.34
Trim28-201ENSMUST00000005705 Cacna2d2Q6PHS9 1154 aa17.15■□□□□ 0.34
Trim28-201ENSMUST00000005705 Bpifb9aQ80XI7 591 aa17.15■□□□□ 0.34
Trim28-201ENSMUST00000005705 PimregQ8BFY7 231 aa17.15■□□□□ 0.34
Trim28-201ENSMUST00000005705 Tekt2Q922G7 430 aa17.15■□□□□ 0.34
Trim28-201ENSMUST00000005705 Q99KU6 348 aa17.15■□□□□ 0.34
Trim28-201ENSMUST00000005705 Paip2Q9D6V8 124 aa17.15■□□□□ 0.34
Trim28-201ENSMUST00000005705 Drg2Q9QXB9 364 aaKnown RBP17.15■□□□□ 0.34
Trim28-201ENSMUST00000005705 Cib2Q9Z309 187 aa17.15■□□□□ 0.34
Trim28-201ENSMUST00000005705 Fam205a1D3YZF6 1314 aa17.15■□□□□ 0.34
Trim28-201ENSMUST00000005705 Eif3dO70194 548 aaKnown RBP17.15■□□□□ 0.34
Trim28-201ENSMUST00000005705 RxrbP28704 520 aa17.15■□□□□ 0.34
Trim28-201ENSMUST00000005705 Rap1gap2Q5SVL6 712 aaKnown RBP17.15■□□□□ 0.34
Trim28-201ENSMUST00000005705 Gm2163Q6PCY5 473 aa17.15■□□□□ 0.34
Trim28-201ENSMUST00000005705 Fbxo43Q8CDI2 640 aa17.15■□□□□ 0.34
Trim28-201ENSMUST00000005705 Extl3Q9WVL6 918 aa17.15■□□□□ 0.34
Trim28-201ENSMUST00000005705 Alms1Q8K4E0 3251 aa17.15■□□□□ 0.34
Trim28-201ENSMUST00000005705 Cep350E9Q309 3095 aa17.14■□□□□ 0.34
Trim28-201ENSMUST00000005705 Taf1Q80UV9 1891 aa17.14■□□□□ 0.33
Trim28-201ENSMUST00000005705 Myh11O08638 1972 aa17.14■□□□□ 0.33
Trim28-201ENSMUST00000005705 Zscan4-ps3A0A1B0GRH6 506 aa17.14■□□□□ 0.33
Trim28-201ENSMUST00000005705 Zscan4-ps2A0A1C7CYU6 506 aa17.14■□□□□ 0.33
Trim28-201ENSMUST00000005705 Gm3415J3QMS8 315 aa17.14■□□□□ 0.33
Trim28-201ENSMUST00000005705 Dhx15O35286 795 aaKnown RBP17.14■□□□□ 0.33
Trim28-201ENSMUST00000005705 CopeO89079 308 aa17.14■□□□□ 0.33
Trim28-201ENSMUST00000005705 Alkbh1P0CB42 389 aa17.14■□□□□ 0.33
Trim28-201ENSMUST00000005705 Sesn2P58043 480 aa17.14■□□□□ 0.33
Trim28-201ENSMUST00000005705 Trim43bP86448 445 aa17.14■□□□□ 0.33
Trim28-201ENSMUST00000005705 Dzip1lQ499E4 774 aa17.14■□□□□ 0.33
Trim28-201ENSMUST00000005705 Crybg3Q80W49 1005 aa17.14■□□□□ 0.33
Trim28-201ENSMUST00000005705 Nt5c1bQ91YE9 573 aa17.14■□□□□ 0.33
Trim28-201ENSMUST00000005705 Gm3404Q9D506 307 aa17.14■□□□□ 0.33
Trim28-201ENSMUST00000005705 Card9A2AIV8 536 aa17.14■□□□□ 0.33
Trim28-201ENSMUST00000005705 6030498E09RikB1AX85 169 aa17.14■□□□□ 0.33
Trim28-201ENSMUST00000005705 Stra6O70491 670 aa17.14■□□□□ 0.33
Trim28-201ENSMUST00000005705 Zdhhc18Q5Y5T2 380 aa17.14■□□□□ 0.33
Trim28-201ENSMUST00000005705 Six1Q62231 284 aa17.14■□□□□ 0.33
Trim28-201ENSMUST00000005705 Sh3rf1Q69ZI1 892 aa17.14■□□□□ 0.33
Trim28-201ENSMUST00000005705 Vmn2r26Q6TAC4 855 aa17.14■□□□□ 0.33
Trim28-201ENSMUST00000005705 RnpepQ8VCT3 650 aaKnown RBP17.14■□□□□ 0.33
Trim28-201ENSMUST00000005705 AuhQ9JLZ3 314 aa17.14■□□□□ 0.33
Trim28-201ENSMUST00000005705 Rap1gapA2ALS5 663 aa17.13■□□□□ 0.33
Retrieved 100 of 22,080 RNA–protein pairs in 27.3 ms