RNA–Protein interactions for RNA: ENSMUST00000005600.5

Rfx1-201, Transcript of MHC class II regulatory factor RFX1, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Rfx1, Length 4,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1-201ENSMUST00000005600 Plcb4Q91UZ1 1175 aa12.73□□□□□ -0.37
Rfx1-201ENSMUST00000005600 Trim66Q924W6 1242 aa12.73□□□□□ -0.37
Rfx1-201ENSMUST00000005600 Tdrd12Q9CWU0 1215 aa12.73□□□□□ -0.37
Rfx1-201ENSMUST00000005600 Prss23Q9D6X6 382 aa12.73□□□□□ -0.37
Rfx1-201ENSMUST00000005600 Col1a1P11087 1453 aa12.73□□□□□ -0.37
Rfx1-201ENSMUST00000005600 Vwa5b1A9Z1V5 1215 aa12.73□□□□□ -0.37
Rfx1-201ENSMUST00000005600 Rab20P35295 233 aa12.73□□□□□ -0.37
Rfx1-201ENSMUST00000005600 Tbc1d10aP58802 500 aa12.73□□□□□ -0.37
Rfx1-201ENSMUST00000005600 Erbb2P70424 1256 aa12.73□□□□□ -0.37
Rfx1-201ENSMUST00000005600 Syce2Q505B8 171 aa12.73□□□□□ -0.37
Rfx1-201ENSMUST00000005600 Tfap2bQ61313 459 aa12.73□□□□□ -0.37
Rfx1-201ENSMUST00000005600 Vat1lQ80TB8 417 aa12.73□□□□□ -0.37
Rfx1-201ENSMUST00000005600 Trmt13Q8BYH3 481 aa12.73□□□□□ -0.37
Rfx1-201ENSMUST00000005600 Thap12Q9CUX1 758 aa12.73□□□□□ -0.37
Rfx1-201ENSMUST00000005600 PrameQ9D4Z5 464 aa12.73□□□□□ -0.37
Rfx1-201ENSMUST00000005600 Sgk1Q9WVC6 431 aa12.73□□□□□ -0.37
Rfx1-201ENSMUST00000005600 Spata31d1aE9QA35 1336 aa12.72□□□□□ -0.37
Rfx1-201ENSMUST00000005600 Arhgap24Q8C4V1 747 aa12.72□□□□□ -0.37
Rfx1-201ENSMUST00000005600 Ptdss1Q99LH2 473 aaKnown RBP12.72□□□□□ -0.37
Rfx1-201ENSMUST00000005600 Tmem174Q9DCX7 243 aa12.72□□□□□ -0.37
Rfx1-201ENSMUST00000005600 Nphs1Q9QZS7 1256 aa12.72□□□□□ -0.37
Rfx1-201ENSMUST00000005600 Mettl1Q9Z120 268 aa12.72□□□□□ -0.37
Rfx1-201ENSMUST00000005600 Olfr247E9PVJ7 320 aa12.72□□□□□ -0.37
Rfx1-201ENSMUST00000005600 Olfr819K7N727 320 aa12.72□□□□□ -0.37
Rfx1-201ENSMUST00000005600 InhbeO08717 350 aa12.72□□□□□ -0.37
Rfx1-201ENSMUST00000005600 SpoplQ2M2N2 392 aa12.72□□□□□ -0.37
Rfx1-201ENSMUST00000005600 Garnl3Q3V0G7 1038 aa12.72□□□□□ -0.37
Rfx1-201ENSMUST00000005600 MogsQ80UM7 834 aaKnown RBP12.72□□□□□ -0.37
Rfx1-201ENSMUST00000005600 Gprasp2Q8BUY8 826 aa12.72□□□□□ -0.37
Rfx1-201ENSMUST00000005600 Atad3Q925I1 591 aa12.72□□□□□ -0.37
Rfx1-201ENSMUST00000005600 AticQ9CWJ9 592 aaKnown RBP12.72□□□□□ -0.37
Rfx1-201ENSMUST00000005600 Pdk2Q9JK42 407 aa12.72□□□□□ -0.37
Rfx1-201ENSMUST00000005600 Sestd1Q80UK0 696 aa12.72□□□□□ -0.37
Rfx1-201ENSMUST00000005600 Dnali1Q8BVN8 258 aa12.72□□□□□ -0.37
Rfx1-201ENSMUST00000005600 Caskin2Q8VHK1 1201 aa12.72□□□□□ -0.37
Rfx1-201ENSMUST00000005600 Trim60Q8VI40 466 aa12.72□□□□□ -0.37
Rfx1-201ENSMUST00000005600 Cdca7Q9D0M2 382 aa12.72□□□□□ -0.37
Rfx1-201ENSMUST00000005600 Tmem206Q9D771 350 aa12.72□□□□□ -0.37
Rfx1-201ENSMUST00000005600 Cyp2s1Q9DBX6 501 aa12.72□□□□□ -0.37
Rfx1-201ENSMUST00000005600 Cnga3Q9JJZ8 631 aa12.72□□□□□ -0.37
Rfx1-201ENSMUST00000005600 PygmQ9WUB3 842 aaKnown RBP12.72□□□□□ -0.37
Rfx1-201ENSMUST00000005600 Rtn2O70622 471 aa12.71□□□□□ -0.37
Rfx1-201ENSMUST00000005600 Rag1P15919 1040 aa12.71□□□□□ -0.37
Rfx1-201ENSMUST00000005600 VdrP48281 422 aa12.71□□□□□ -0.37
Rfx1-201ENSMUST00000005600 Trim72Q1XH17 477 aa12.71□□□□□ -0.37
Rfx1-201ENSMUST00000005600 Znf76Q8BMU0 568 aa12.71□□□□□ -0.37
Rfx1-201ENSMUST00000005600 Pnma1Q8C1C8 353 aa12.71□□□□□ -0.37
Rfx1-201ENSMUST00000005600 Tph2Q8CGV2 488 aa12.71□□□□□ -0.37
Rfx1-201ENSMUST00000005600 Gnl3Q8CI11 538 aaKnown RBP12.71□□□□□ -0.37
Rfx1-201ENSMUST00000005600 Dnajc9Q91WN1 259 aaKnown RBP12.71□□□□□ -0.37
Rfx1-201ENSMUST00000005600 Clec4aQ9QZ15 238 aa12.71□□□□□ -0.37
Rfx1-201ENSMUST00000005600 Anapc7Q9WVM3 565 aa12.71□□□□□ -0.37
Rfx1-201ENSMUST00000005600 Ildr2B5TVM2 661 aa12.71□□□□□ -0.37
Rfx1-201ENSMUST00000005600 Wdr95D3Z7A8 784 aa12.71□□□□□ -0.37
Rfx1-201ENSMUST00000005600 E2f6O54917 272 aa12.71□□□□□ -0.37
Rfx1-201ENSMUST00000005600 Psmc5P62196 406 aa12.71□□□□□ -0.37
Rfx1-201ENSMUST00000005600 PhbP67778 272 aaKnown RBP12.71□□□□□ -0.37
Rfx1-201ENSMUST00000005600 Nrp1P97333 923 aa12.71□□□□□ -0.37
Rfx1-201ENSMUST00000005600 Cdk16Q04735 496 aa12.71□□□□□ -0.37
Rfx1-201ENSMUST00000005600 Pbxip1Q3TVI8 727 aa12.71□□□□□ -0.37
Rfx1-201ENSMUST00000005600 Stip1Q60864 543 aaKnown RBP12.71□□□□□ -0.37
Rfx1-201ENSMUST00000005600 Pcsk7Q61139 770 aa12.71□□□□□ -0.37
Rfx1-201ENSMUST00000005600 Xpnpep1Q6P1B1 623 aa12.71□□□□□ -0.37
Rfx1-201ENSMUST00000005600 Cyfip1Q7TMB8 1253 aa12.71□□□□□ -0.37
Rfx1-201ENSMUST00000005600 Lin7aQ8JZS0 233 aa12.71□□□□□ -0.37
Rfx1-201ENSMUST00000005600 Tnpo2Q99LG2 887 aaKnown RBP12.71□□□□□ -0.37
Rfx1-201ENSMUST00000005600 1700013H16RikQ9DAC5 291 aa12.71□□□□□ -0.37
Rfx1-201ENSMUST00000005600 Cst12Q9DAN8 128 aa12.71□□□□□ -0.37
Rfx1-201ENSMUST00000005600 Cyp39a1Q9JKJ9 470 aa12.71□□□□□ -0.37
Rfx1-201ENSMUST00000005600 Scnn1bQ9WU38 638 aa12.71□□□□□ -0.37
Rfx1-201ENSMUST00000005600 Axin2O88566 840 aa12.71□□□□□ -0.38
Rfx1-201ENSMUST00000005600 PdgfraP26618 1089 aa12.71□□□□□ -0.38
Rfx1-201ENSMUST00000005600 TxkP42682 527 aa12.71□□□□□ -0.38
Rfx1-201ENSMUST00000005600 AdssP46664 456 aa12.71□□□□□ -0.38
Rfx1-201ENSMUST00000005600 Stmn2P55821 179 aa12.71□□□□□ -0.38
Rfx1-201ENSMUST00000005600 4933427I04RikQ3V053 235 aa12.71□□□□□ -0.38
Rfx1-201ENSMUST00000005600 Tdpoz4Q6YCH2 370 aa12.71□□□□□ -0.38
Rfx1-201ENSMUST00000005600 Eif2aQ8BJW6 581 aaKnown RBP12.71□□□□□ -0.38
Rfx1-201ENSMUST00000005600 Rtp1Q8C8C1 263 aa12.71□□□□□ -0.38
Rfx1-201ENSMUST00000005600 Atp5c1Q91VR2 298 aaKnown RBP12.71□□□□□ -0.38
Rfx1-201ENSMUST00000005600 Setd3Q91WC0 594 aa12.71□□□□□ -0.38
Rfx1-201ENSMUST00000005600 PnkpQ9JLV6 522 aaKnown RBP12.71□□□□□ -0.38
Rfx1-201ENSMUST00000005600 Krt90E9Q1Z0 538 aa12.7□□□□□ -0.38
Rfx1-201ENSMUST00000005600 Spata31d1dE9Q5W2 1247 aa12.7□□□□□ -0.38
Rfx1-201ENSMUST00000005600 Birc5O70201 140 aa12.7□□□□□ -0.38
Rfx1-201ENSMUST00000005600 Crnkl1P63154 690 aaKnown RBP12.7□□□□□ -0.38
Rfx1-201ENSMUST00000005600 FerP70451 823 aa12.7□□□□□ -0.38
Rfx1-201ENSMUST00000005600 Mark3Q03141 753 aa12.7□□□□□ -0.38
Rfx1-201ENSMUST00000005600 Plk1Q07832 603 aa12.7□□□□□ -0.38
Rfx1-201ENSMUST00000005600 Ssxb5Q6XAS2 159 aa12.7□□□□□ -0.38
Rfx1-201ENSMUST00000005600 Tbc1d22bQ80VE5 505 aa12.7□□□□□ -0.38
Rfx1-201ENSMUST00000005600 Tmem161bQ8C2L6 487 aa12.7□□□□□ -0.38
Rfx1-201ENSMUST00000005600 Slc18a1Q8R090 521 aa12.7□□□□□ -0.38
Rfx1-201ENSMUST00000005600 Acot11Q8VHQ9 594 aa12.7□□□□□ -0.38
Rfx1-201ENSMUST00000005600 IydQ9DCX8 285 aa12.7□□□□□ -0.38
Rfx1-201ENSMUST00000005600 PodxlQ9R0M4 503 aa12.7□□□□□ -0.38
Rfx1-201ENSMUST00000005600 B020011L13RikA0A087WQI7 412 aa12.7□□□□□ -0.38
Rfx1-201ENSMUST00000005600 Ttc7bE9Q6P5 843 aa12.7□□□□□ -0.38
Rfx1-201ENSMUST00000005600 Cyp4f40G3UW81 524 aa12.7□□□□□ -0.38
Rfx1-201ENSMUST00000005600 Ift81O35594 676 aa12.7□□□□□ -0.38
Retrieved 100 of 22,080 RNA–protein pairs in 18.2 ms