RNA–Protein interactions for RNA: YMR179W

SPT21, Transcript of Protein with a role in transcriptional silencing, yeast

Gene SPT21, Length 2,277 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SPT21	YMR179W	DSF1	P0CX08	502 aa		0.89	□□□□□ -2.27
SPT21	YMR179W	YNR073C	P0CX09	502 aa		0.89	□□□□□ -2.27
SPT21	YMR179W	OAC1	P32332	324 aa		0.89	□□□□□ -2.27
SPT21	YMR179W	MGM101	P32787	269 aa	Known RBP	0.89	□□□□□ -2.27
SPT21	YMR179W	YPT52	P36018	234 aa	Known RBP	0.89	□□□□□ -2.27
SPT21	YMR179W	YKR032W	P36127	104 aa		0.89	□□□□□ -2.27
SPT21	YMR179W	YHR125W	P38831	101 aa		0.89	□□□□□ -2.27
SPT21	YMR179W	FIS1	P40515	155 aa		0.89	□□□□□ -2.27
SPT21	YMR179W	RPA43	P46669	326 aa		0.89	□□□□□ -2.27
SPT21	YMR179W	IRC18	P47056	224 aa		0.89	□□□□□ -2.27
SPT21	YMR179W	YJL016W	P47072	561 aa		0.89	□□□□□ -2.27
SPT21	YMR179W	BXI1	P48558	297 aa		0.89	□□□□□ -2.27
SPT21	YMR179W	CAB4	P53332	305 aa		0.89	□□□□□ -2.27
SPT21	YMR179W	PDR17	P53844	350 aa		0.89	□□□□□ -2.27
SPT21	YMR179W	YDR248C	Q03786	193 aa		0.89	□□□□□ -2.27
SPT21	YMR179W	PEX12	Q04370	399 aa		0.89	□□□□□ -2.27
SPT21	YMR179W	ATG38	Q05789	226 aa	Known RBP	0.89	□□□□□ -2.27
SPT21	YMR179W	ABP140	Q08641	628 aa	Known RBP	0.89	□□□□□ -2.27
SPT21	YMR179W	YOR020W-A	Q3E824	90 aa		0.89	□□□□□ -2.27
SPT21	YMR179W	YCL012C	Q8J0M4	134 aa		0.89	□□□□□ -2.27
SPT21	YMR179W	TUS1	Q06412	1307 aa		0.89	□□□□□ -2.27
SPT21	YMR179W	Q0255	P03881	472 aa		0.89	□□□□□ -2.27
SPT21	YMR179W	RPL27A	P0C2H6	136 aa	Known RBP	0.89	□□□□□ -2.27
SPT21	YMR179W	RPL27B	P0C2H7	136 aa	Known RBP	0.89	□□□□□ -2.27
SPT21	YMR179W	GCN3	P14741	305 aa		0.89	□□□□□ -2.27
SPT21	YMR179W	FCY2	P17064	533 aa		0.89	□□□□□ -2.27
SPT21	YMR179W	YPK2	P18961	677 aa		0.89	□□□□□ -2.27
SPT21	YMR179W	YBR063C	P38083	404 aa		0.89	□□□□□ -2.27
SPT21	YMR179W	ECM33	P38248	429 aa	Known RBP	0.89	□□□□□ -2.27
SPT21	YMR179W	COG3	P40094	801 aa		0.89	□□□□□ -2.27
SPT21	YMR179W	ARC15	P40518	154 aa	RIP-Chip data	0.89	□□□□□ -2.27	not detected
SPT21	YMR179W	FAR7	P43592	221 aa		0.89	□□□□□ -2.27
SPT21	YMR179W	NOP19	P53317	196 aa	Predicted RBP	0.89	□□□□□ -2.27
SPT21	YMR179W	DID2	P69771	204 aa		0.89	□□□□□ -2.27
SPT21	YMR179W	ABF2	Q02486	183 aa		0.89	□□□□□ -2.27
SPT21	YMR179W	YML108W	Q03759	105 aa		0.89	□□□□□ -2.27
SPT21	YMR179W	ATG39	Q06159	398 aa		0.89	□□□□□ -2.27
SPT21	YMR179W	RDS3	Q06835	107 aa	Predicted RBP	0.89	□□□□□ -2.27
SPT21	YMR179W	CLP1	Q08685	445 aa	Predicted RBP	0.89	□□□□□ -2.27
SPT21	YMR179W	LSO2	Q3E772	92 aa	Known RBP	0.89	□□□□□ -2.27
SPT21	YMR179W	DRS2	P39524	1355 aa		0.88	□□□□□ -2.27
SPT21	YMR179W	RPL26A	P05743	127 aa	Known RBP	0.88	□□□□□ -2.27
SPT21	YMR179W	ADH3	P07246	375 aa	Known RBP	0.88	□□□□□ -2.27
SPT21	YMR179W	YHR032W-A	P0C5N6	59 aa		0.88	□□□□□ -2.27
SPT21	YMR179W	APA2	P22108	325 aa		0.88	□□□□□ -2.27
SPT21	YMR179W	SPS18	P32572	300 aa		0.88	□□□□□ -2.27
SPT21	YMR179W	YAR068W	P39564	161 aa		0.88	□□□□□ -2.27
SPT21	YMR179W	BMT5	P40493	336 aa		0.88	□□□□□ -2.27
SPT21	YMR179W	SMD3	P43321	101 aa	Known RBP	0.88	□□□□□ -2.27
SPT21	YMR179W	YJR056C	P47115	236 aa		0.88	□□□□□ -2.27
SPT21	YMR179W	YJR146W	P47174	117 aa		0.88	□□□□□ -2.27
SPT21	YMR179W	GET1	P53192	235 aa		0.88	□□□□□ -2.27
SPT21	YMR179W	RPL26B	P53221	127 aa	Known RBP	0.88	□□□□□ -2.27
SPT21	YMR179W	SNZ1	Q03148	297 aa		0.88	□□□□□ -2.27
SPT21	YMR179W	YMR279C	Q03263	540 aa		0.88	□□□□□ -2.27
SPT21	YMR179W	YMD8	Q03697	442 aa		0.88	□□□□□ -2.27
SPT21	YMR179W	QCR7	P00128	127 aa		0.87	□□□□□ -2.27
SPT21	YMR179W	CCA1	P21269	546 aa		0.87	□□□□□ -2.27
SPT21	YMR179W	APS1	P35181	156 aa		0.87	□□□□□ -2.27
SPT21	YMR179W	YCR087C-A	P37263	153 aa		0.87	□□□□□ -2.27
SPT21	YMR179W	GRE3	P38715	327 aa	Known RBP RIP-Chip data	0.87	□□□□□ -2.27	not detected
SPT21	YMR179W	DOG2	P38773	246 aa		0.87	□□□□□ -2.27
SPT21	YMR179W	DOG1	P38774	246 aa		0.87	□□□□□ -2.27
SPT21	YMR179W	CTR2	P38865	189 aa		0.87	□□□□□ -2.27
SPT21	YMR179W	IRC22	P40006	225 aa		0.87	□□□□□ -2.27
SPT21	YMR179W	YGR026W	P53217	278 aa		0.87	□□□□□ -2.27
SPT21	YMR179W	YNL010W	P53981	241 aa	Known RBP	0.87	□□□□□ -2.27
SPT21	YMR179W	PET191	Q02772	108 aa		0.87	□□□□□ -2.27
SPT21	YMR179W	MIX17	Q03667	156 aa		0.87	□□□□□ -2.27
SPT21	YMR179W	RAD9	P14737	1309 aa		0.87	□□□□□ -2.27
SPT21	YMR179W	YPR170W-B	P0C5R9	85 aa		0.87	□□□□□ -2.27
SPT21	YMR179W	MER1	P16523	270 aa		0.87	□□□□□ -2.27
SPT21	YMR179W	SCM4	P32564	187 aa		0.87	□□□□□ -2.27
SPT21	YMR179W	TCA17	P32613	152 aa		0.87	□□□□□ -2.27
SPT21	YMR179W	VMA11	P32842	164 aa		0.87	□□□□□ -2.27
SPT21	YMR179W	YHL026C	P38740	315 aa		0.87	□□□□□ -2.27
SPT21	YMR179W	MED6	P38782	295 aa		0.87	□□□□□ -2.27
SPT21	YMR179W	YRB2	P40517	327 aa		0.87	□□□□□ -2.27
SPT21	YMR179W	MRPL49	P40858	161 aa	Predicted RBP	0.87	□□□□□ -2.27
SPT21	YMR179W	PRM8	P53174	237 aa		0.87	□□□□□ -2.27
SPT21	YMR179W	SLM2	P53955	656 aa		0.87	□□□□□ -2.27
SPT21	YMR179W	RGM1	Q00453	211 aa		0.87	□□□□□ -2.27
SPT21	YMR179W	TLG1	Q03322	224 aa		0.87	□□□□□ -2.27
SPT21	YMR179W	LPP1	Q04396	274 aa		0.87	□□□□□ -2.27
SPT21	YMR179W	SUE1	Q06524	206 aa		0.87	□□□□□ -2.27
SPT21	YMR179W	CDD1	Q06549	142 aa		0.87	□□□□□ -2.27
SPT21	YMR179W	TDA8	Q6B2U8	126 aa		0.87	□□□□□ -2.27
SPT21	YMR179W	CHD1	P32657	1468 aa		0.87	□□□□□ -2.27
SPT21	YMR179W	RPL9A	P05738	191 aa	Known RBP	0.86	□□□□□ -2.27
SPT21	YMR179W	SEC4	P07560	215 aa	Known RBP	0.86	□□□□□ -2.27
SPT21	YMR179W	SCO1	P23833	295 aa		0.86	□□□□□ -2.27
SPT21	YMR179W	ADE1	P27616	306 aa		0.86	□□□□□ -2.27
SPT21	YMR179W	ASF2	P32448	525 aa	Predicted RBP	0.86	□□□□□ -2.27
SPT21	YMR179W	CLB6	P32943	380 aa		0.86	□□□□□ -2.27
SPT21	YMR179W	MRPL28	P36527	147 aa		0.86	□□□□□ -2.27
SPT21	YMR179W	TRM5	P38793	499 aa		0.86	□□□□□ -2.27
SPT21	YMR179W	RSM25	P40496	264 aa		0.86	□□□□□ -2.27
SPT21	YMR179W	SNX4	P47057	423 aa		0.86	□□□□□ -2.27
SPT21	YMR179W	DSK2	P48510	373 aa		0.86	□□□□□ -2.27
SPT21	YMR179W	RPL9B	P51401	191 aa	Known RBP	0.86	□□□□□ -2.27

Retrieved 100 of 5,963 RNA–protein pairs in 12.9 ms