RNA–Protein interactions for RNA: YHR003C

TCD1, Transcript of tRNA threonylcarbamoyladenosine dehydratase, yeastyeast

Gene TCD1, Length 1,290 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TCD1YHR003C CPR7P47103 393 aa2.38□□□□□ -2.03
TCD1YHR003C RPL4BP49626 362 aaKnown RBP2.38□□□□□ -2.03
TCD1YHR003C YGL235WP53071 178 aa2.38□□□□□ -2.03
TCD1YHR003C RHO3Q00245 231 aaKnown RBP2.38□□□□□ -2.03
TCD1YHR003C ABF2Q02486 183 aa2.38□□□□□ -2.03
TCD1YHR003C ELP3Q02908 557 aaKnown RBP2.38□□□□□ -2.03
TCD1YHR003C SDC1Q03323 175 aa2.38□□□□□ -2.03
TCD1YHR003C UTP15Q04305 513 aaKnown RBP2.38□□□□□ -2.03
TCD1YHR003C PBA1Q05778 276 aa2.38□□□□□ -2.03
TCD1YHR003C GRX8Q05926 109 aa2.38□□□□□ -2.03
TCD1YHR003C LIP2Q06005 328 aa2.38□□□□□ -2.03
TCD1YHR003C GAS2Q06135 555 aa2.38□□□□□ -2.03
TCD1YHR003C DXO1Q06349 442 aa2.38□□□□□ -2.03
TCD1YHR003C NOC4Q06512 552 aaPredicted RBP2.38□□□□□ -2.03
TCD1YHR003C YPR147CQ06522 304 aaKnown RBP2.38□□□□□ -2.03
TCD1YHR003C RPN8Q08723 338 aaKnown RBP2.38□□□□□ -2.03
TCD1YHR003C YPL245WQ12179 454 aaKnown RBP2.38□□□□□ -2.03
TCD1YHR003C TFC7Q12415 435 aa2.38□□□□□ -2.03
TCD1YHR003C RDI1Q12434 202 aa2.38□□□□□ -2.03
TCD1YHR003C RPS28AQ3E7X9 67 aaPredicted RBP2.38□□□□□ -2.03
TCD1YHR003C YKR104WP0CE69 306 aa2.37□□□□□ -2.03
TCD1YHR003C TAH1P25638 111 aaPredicted RBP2.37□□□□□ -2.03
TCD1YHR003C MDH3P32419 343 aaKnown RBP RIP-Chip data2.37□□□□□ -2.03not detected
TCD1YHR003C SPS18P32572 300 aa2.37□□□□□ -2.03
TCD1YHR003C TIP20P33891 701 aa2.37□□□□□ -2.03
TCD1YHR003C YKR041WP36134 250 aa2.37□□□□□ -2.03
TCD1YHR003C NAT2P37293 288 aa2.37□□□□□ -2.03
TCD1YHR003C RFS1P38234 210 aaKnown RBP2.37□□□□□ -2.03
TCD1YHR003C YBR062CP38239 180 aa2.37□□□□□ -2.03
TCD1YHR003C PAN6P40459 309 aa2.37□□□□□ -2.03
TCD1YHR003C YIL067CP40514 678 aa2.37□□□□□ -2.03
TCD1YHR003C YIL029CP40538 142 aa2.37□□□□□ -2.03
TCD1YHR003C MRPL49P40858 161 aaPredicted RBP2.37□□□□□ -2.03
TCD1YHR003C LCB3P47013 409 aa2.37□□□□□ -2.03
TCD1YHR003C VMA10P48836 114 aaKnown RBP2.37□□□□□ -2.03
TCD1YHR003C SBH2P52871 88 aa2.37□□□□□ -2.03
TCD1YHR003C SDT1P53078 280 aa2.37□□□□□ -2.03
TCD1YHR003C CLD1P53264 445 aa2.37□□□□□ -2.03
TCD1YHR003C YMR010WQ03687 405 aa2.37□□□□□ -2.03
TCD1YHR003C SPG4Q04438 115 aa2.37□□□□□ -2.03
TCD1YHR003C YML096WQ04489 525 aa2.37□□□□□ -2.03
TCD1YHR003C SFM1Q12314 213 aa2.37□□□□□ -2.03
TCD1YHR003C YDL085C-AQ3E7B7 68 aaKnown RBP2.37□□□□□ -2.03
TCD1YHR003C CDC28P00546 298 aaKnown RBP2.36□□□□□ -2.03
TCD1YHR003C CYC3P06182 269 aa2.36□□□□□ -2.03
TCD1YHR003C ERD2P18414 219 aa2.36□□□□□ -2.03
TCD1YHR003C RPB5P20434 215 aa2.36□□□□□ -2.03
TCD1YHR003C DBF2P22204 572 aa2.36□□□□□ -2.03
TCD1YHR003C MRPL20P22354 195 aaPredicted RBP2.36□□□□□ -2.03
TCD1YHR003C ATG15P25641 520 aa2.36□□□□□ -2.03
TCD1YHR003C URA10P30402 227 aa2.36□□□□□ -2.03
TCD1YHR003C CAT2P32796 670 aaKnown RBP2.36□□□□□ -2.03
TCD1YHR003C SDH3P33421 198 aa2.36□□□□□ -2.03
TCD1YHR003C UPS2P35200 230 aa2.36□□□□□ -2.03
TCD1YHR003C GPX1P36014 167 aa2.36□□□□□ -2.03
TCD1YHR003C YHL049CP38722 271 aa2.36□□□□□ -2.03
TCD1YHR003C PEX22P39718 180 aa2.36□□□□□ -2.03
TCD1YHR003C HEM14P40012 539 aa2.36□□□□□ -2.03
TCD1YHR003C YMR144WP40214 342 aaKnown RBP2.36□□□□□ -2.03
TCD1YHR003C YFH7P43591 353 aa2.36□□□□□ -2.03
TCD1YHR003C FAR7P43592 221 aa2.36□□□□□ -2.03
TCD1YHR003C YJR054WP47114 497 aa2.36□□□□□ -2.03
TCD1YHR003C BXI1P48558 297 aa2.36□□□□□ -2.03
TCD1YHR003C SDS23P53172 527 aa2.36□□□□□ -2.03
TCD1YHR003C COG7P53195 279 aa2.36□□□□□ -2.03
TCD1YHR003C CWC25P53854 179 aaKnown RBP2.36□□□□□ -2.03
TCD1YHR003C COG5P53951 403 aa2.36□□□□□ -2.03
TCD1YHR003C YOR283WQ12040 230 aaKnown RBP2.36□□□□□ -2.03
TCD1YHR003C THP3Q12049 470 aaKnown RBP2.36□□□□□ -2.03
TCD1YHR003C ATP16Q12165 160 aa2.36□□□□□ -2.03
TCD1YHR003C HRT3Q12347 344 aa2.36□□□□□ -2.03
TCD1YHR003C EFG1Q3E705 233 aaKnown RBP2.36□□□□□ -2.03
TCD1YHR003C MRS1P07266 363 aa2.35□□□□□ -2.03
TCD1YHR003C PET54P10834 293 aa2.35□□□□□ -2.03
TCD1YHR003C CPR4P25334 318 aa2.35□□□□□ -2.03
TCD1YHR003C LDS1P31379 325 aa2.35□□□□□ -2.03
TCD1YHR003C ARO7P32178 256 aa2.35□□□□□ -2.03
TCD1YHR003C MRPL39P36533 70 aa2.35□□□□□ -2.03
TCD1YHR003C SHE3P38272 425 aaKnown RBP2.35□□□□□ -2.03
TCD1YHR003C VMA22P38784 181 aa2.35□□□□□ -2.03
TCD1YHR003C ECM14P38836 430 aa2.35□□□□□ -2.03
TCD1YHR003C CYC2P38909 366 aa2.35□□□□□ -2.03
TCD1YHR003C OXA1P39952 402 aa2.35□□□□□ -2.03
TCD1YHR003C PDS1P40316 373 aaPredicted RBP2.35□□□□□ -2.03
TCD1YHR003C REE1P40893 198 aa2.35□□□□□ -2.03
TCD1YHR003C HAC1P41546 238 aa2.35□□□□□ -2.03
TCD1YHR003C UFE1P41834 346 aa2.35□□□□□ -2.03
TCD1YHR003C YGL204CP53089 101 aa2.35□□□□□ -2.03
TCD1YHR003C MRH4P53166 561 aa2.35□□□□□ -2.03
TCD1YHR003C YNL046WP53956 172 aa2.35□□□□□ -2.03
TCD1YHR003C FSH2Q05015 223 aa2.35□□□□□ -2.03
TCD1YHR003C INM2Q05533 292 aa2.35□□□□□ -2.03
TCD1YHR003C YHC1Q05900 231 aaKnown RBP2.35□□□□□ -2.03
TCD1YHR003C YLR036CQ07986 203 aa2.35□□□□□ -2.03
TCD1YHR003C YOL024WQ08172 172 aa2.35□□□□□ -2.03
TCD1YHR003C MIM1Q08176 113 aa2.35□□□□□ -2.03
TCD1YHR003C YOR186WQ08560 144 aa2.35□□□□□ -2.03
TCD1YHR003C YOR292CQ08743 309 aa2.35□□□□□ -2.03
TCD1YHR003C RRG7Q08774 242 aaPredicted RBP2.35□□□□□ -2.03
TCD1YHR003C TIR4Q12218 487 aaPredicted RBP2.35□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 23.7 ms