RNA–Protein interactions for RNA: YFL002C

SPB4, Transcript of Putative ATP-dependent RNA helicase, yeastyeast

Gene SPB4, Length 1,821 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPB4YFL002C YKE4P40544 346 aa3.11□□□□□ -1.91
SPB4YFL002C RSM27P53305 110 aa3.11□□□□□ -1.91
SPB4YFL002C LSM7P53905 115 aaKnown RBP3.11□□□□□ -1.91
SPB4YFL002C HTL1Q9URQ5 78 aa3.11□□□□□ -1.91
SPB4YFL002C CPT1P17898 393 aa3.1□□□□□ -1.91
SPB4YFL002C CKA2P19454 339 aa3.1□□□□□ -1.91
SPB4YFL002C SEC22P22214 214 aa3.1□□□□□ -1.91
SPB4YFL002C TAH1P25638 111 aaPredicted RBP3.1□□□□□ -1.91
SPB4YFL002C MRPL49P40858 161 aaPredicted RBP3.1□□□□□ -1.91
SPB4YFL002C SNM1P40993 198 aa3.1□□□□□ -1.91
SPB4YFL002C TMA22P47089 198 aaPredicted RBP3.1□□□□□ -1.91
SPB4YFL002C JAC1P53193 184 aa3.1□□□□□ -1.91
SPB4YFL002C HAL1Q01766 294 aa3.1□□□□□ -1.91
SPB4YFL002C SMD1Q02260 146 aaPredicted RBP3.1□□□□□ -1.91
SPB4YFL002C ABF2Q02486 183 aa3.1□□□□□ -1.91
SPB4YFL002C TSA2Q04120 196 aa3.1□□□□□ -1.91
SPB4YFL002C YLR030WQ07967 263 aa3.1□□□□□ -1.91
SPB4YFL002C TMC1Q08422 150 aaPredicted RBP3.1□□□□□ -1.91
SPB4YFL002C YPL264CQ08980 353 aa3.1□□□□□ -1.91
SPB4YFL002C TCA17P32613 152 aa3.09□□□□□ -1.91
SPB4YFL002C PDS1P40316 373 aaPredicted RBP3.09□□□□□ -1.91
SPB4YFL002C AIM25P47140 327 aa3.09□□□□□ -1.91
SPB4YFL002C COQ5P49017 307 aa3.09□□□□□ -1.91
SPB4YFL002C YOL024WQ08172 172 aa3.09□□□□□ -1.91
SPB4YFL002C PRR2Q12310 699 aa3.09□□□□□ -1.91
SPB4YFL002C IGO2Q9P305 131 aa3.09□□□□□ -1.91
SPB4YFL002C RPS19AP07280 144 aaKnown RBP3.09□□□□□ -1.92
SPB4YFL002C RPS19BP07281 144 aaPredicted RBP3.09□□□□□ -1.92
SPB4YFL002C PCL1P24867 279 aa3.09□□□□□ -1.92
SPB4YFL002C MGT1P26188 188 aa3.09□□□□□ -1.92
SPB4YFL002C RNP1P32385 249 aa3.09□□□□□ -1.92
SPB4YFL002C ERG24P32462 438 aaKnown RBP3.09□□□□□ -1.92
SPB4YFL002C DOG2P38773 246 aa3.09□□□□□ -1.92
SPB4YFL002C DOG1P38774 246 aa3.09□□□□□ -1.92
SPB4YFL002C MDM34P53083 459 aa3.09□□□□□ -1.92
SPB4YFL002C YNL247WP53852 767 aaKnown RBP3.09□□□□□ -1.92
SPB4YFL002C GRH1Q04410 372 aaKnown RBP3.09□□□□□ -1.92
SPB4YFL002C GGA1Q06336 557 aa3.09□□□□□ -1.92
SPB4YFL002C YLR036CQ07986 203 aa3.09□□□□□ -1.92
SPB4YFL002C YPL257WQ08974 193 aa3.09□□□□□ -1.92
SPB4YFL002C PAN1P32521 1480 aa3.09□□□□□ -1.92
SPB4YFL002C RPL25P04456 142 aaKnown RBP3.08□□□□□ -1.92
SPB4YFL002C GRX2P17695 143 aaKnown RBP3.08□□□□□ -1.92
SPB4YFL002C TOM40P23644 387 aaKnown RBP3.08□□□□□ -1.92
SPB4YFL002C YKR041WP36134 250 aa3.08□□□□□ -1.92
SPB4YFL002C MSA2P36157 363 aa3.08□□□□□ -1.92
SPB4YFL002C MAK5P38112 773 aaPredicted RBP3.08□□□□□ -1.92
SPB4YFL002C RPF1P38805 295 aaKnown RBP3.08□□□□□ -1.92
SPB4YFL002C PRE5P40302 234 aaKnown RBP3.08□□□□□ -1.92
SPB4YFL002C YMD8Q03697 442 aa3.08□□□□□ -1.92
SPB4YFL002C YMR315WQ04869 349 aaKnown RBP3.08□□□□□ -1.92
SPB4YFL002C PIN3Q06449 215 aa3.08□□□□□ -1.92
SPB4YFL002C NIP7Q08962 181 aaKnown RBP3.08□□□□□ -1.92
SPB4YFL002C YOR020W-AQ3E824 90 aa3.08□□□□□ -1.92
SPB4YFL002C NUP157P40064 1391 aaKnown RBP3.08□□□□□ -1.92
SPB4YFL002C CDC7P06243 507 aa3.07□□□□□ -1.92
SPB4YFL002C CUP2P15315 225 aa3.07□□□□□ -1.92
SPB4YFL002C RPA43P46669 326 aa3.07□□□□□ -1.92
SPB4YFL002C YGR050CP53231 118 aa3.07□□□□□ -1.92
SPB4YFL002C MRX8Q05473 314 aa3.07□□□□□ -1.92
SPB4YFL002C YOL160WQ08321 113 aa3.07□□□□□ -1.92
SPB4YFL002C NOT5Q12514 560 aaPredicted RBP3.07□□□□□ -1.92
SPB4YFL002C YDL085C-AQ3E7B7 68 aaKnown RBP3.07□□□□□ -1.92
SPB4YFL002C TRX3P25372 127 aa3.07□□□□□ -1.92
SPB4YFL002C FIG1P38224 298 aa3.07□□□□□ -1.92
SPB4YFL002C IRC22P40006 225 aa3.07□□□□□ -1.92
SPB4YFL002C IES3Q12345 250 aa3.07□□□□□ -1.92
SPB4YFL002C GEP5Q12393 293 aa3.07□□□□□ -1.92
SPB4YFL002C YHR214C-EQ8TGK0 99 aa3.07□□□□□ -1.92
SPB4YFL002C DSF1P0CX08 502 aa3.06□□□□□ -1.92
SPB4YFL002C YNR073CP0CX09 502 aa3.06□□□□□ -1.92
SPB4YFL002C PTM1P32857 523 aa3.06□□□□□ -1.92
SPB4YFL002C CLG1P35190 452 aa3.06□□□□□ -1.92
SPB4YFL002C RCN1P36054 211 aa3.06□□□□□ -1.92
SPB4YFL002C UTH1P36135 365 aa3.06□□□□□ -1.92
SPB4YFL002C RMD6P39975 231 aa3.06□□□□□ -1.92
SPB4YFL002C YFL012WP43580 148 aa3.06□□□□□ -1.92
SPB4YFL002C YFR045WP43617 309 aa3.06□□□□□ -1.92
SPB4YFL002C UBC12P52491 188 aa3.06□□□□□ -1.92
SPB4YFL002C YNL184CP53876 108 aa3.06□□□□□ -1.92
SPB4YFL002C COG5P53951 403 aa3.06□□□□□ -1.92
SPB4YFL002C YLR050CQ12155 161 aaKnown RBP3.06□□□□□ -1.92
SPB4YFL002C FCY2P17064 533 aa3.05□□□□□ -1.92
SPB4YFL002C YBR063CP38083 404 aa3.05□□□□□ -1.92
SPB4YFL002C COS8P38723 381 aa3.05□□□□□ -1.92
SPB4YFL002C SEO1P39709 593 aa3.05□□□□□ -1.92
SPB4YFL002C ALG9P53868 555 aaKnown RBP3.05□□□□□ -1.92
SPB4YFL002C LPP1Q04396 274 aa3.05□□□□□ -1.92
SPB4YFL002C YOR283WQ12040 230 aaKnown RBP3.05□□□□□ -1.92
SPB4YFL002C TDA8Q6B2U8 126 aa3.05□□□□□ -1.92
SPB4YFL002C SGA1P08019 549 aa3.05□□□□□ -1.92
SPB4YFL002C MEI4P29467 408 aa3.05□□□□□ -1.92
SPB4YFL002C ACP1P32463 125 aa3.05□□□□□ -1.92
SPB4YFL002C TRR2P38816 342 aa3.05□□□□□ -1.92
SPB4YFL002C HMF1P40037 129 aaKnown RBP3.05□□□□□ -1.92
SPB4YFL002C YER076CP40049 302 aa3.05□□□□□ -1.92
SPB4YFL002C YNL010WP53981 241 aaKnown RBP3.05□□□□□ -1.92
SPB4YFL002C SIR2P06700 562 aa3.04□□□□□ -1.92
SPB4YFL002C MAG1P22134 296 aaKnown RBP3.04□□□□□ -1.92
SPB4YFL002C FIS1P40515 155 aa3.04□□□□□ -1.92
Retrieved 100 of 5,963 RNA–protein pairs in 25.3 ms