RNA–Protein interactions for RNA: ENST00000641947.1

PHGDH-232, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,774 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-232ENST00000641947 PTGISQ16647 500 aa18.93■□□□□ 0.62
PHGDH-232ENST00000641947 C1orf127Q8N9H9 656 aa18.93■□□□□ 0.62
PHGDH-232ENST00000641947 SNTG2Q9NY99 539 aa18.93■□□□□ 0.62
PHGDH-232ENST00000641947 NAGPAQ9UK23 515 aa18.93■□□□□ 0.62
PHGDH-232ENST00000641947 NOCTQ9UK39 431 aaKnown RBP18.93■□□□□ 0.62
PHGDH-232ENST00000641947 PJA2O43164 708 aa18.92■□□□□ 0.62
PHGDH-232ENST00000641947 ACO1P21399 889 aaKnown RBP18.92■□□□□ 0.62
PHGDH-232ENST00000641947 GUCY2FP51841 1108 aa18.92■□□□□ 0.62
PHGDH-232ENST00000641947 POU5F1Q01860 360 aaKnown RBP18.92■□□□□ 0.62
PHGDH-232ENST00000641947 ARHGEF6Q15052 776 aa18.92■□□□□ 0.62
PHGDH-232ENST00000641947 WDR44Q5JSH3 913 aa18.92■□□□□ 0.62
PHGDH-232ENST00000641947 SLC47A2Q86VL8 602 aa18.92■□□□□ 0.62
PHGDH-232ENST00000641947 GLYCTKQ8IVS8 523 aa18.92■□□□□ 0.62
PHGDH-232ENST00000641947 SLC35F6Q8N357 371 aa18.92■□□□□ 0.62
PHGDH-232ENST00000641947 EPS8L1Q8TE68 723 aa18.92■□□□□ 0.62
PHGDH-232ENST00000641947 VTI1AQ96AJ9 217 aa18.92■□□□□ 0.62
PHGDH-232ENST00000641947 ACAP3Q96P50 834 aa18.92■□□□□ 0.62
PHGDH-232ENST00000641947 XYLT2Q9H1B5 865 aa18.92■□□□□ 0.62
PHGDH-232ENST00000641947 PAXBP1Q9Y5B6 917 aa18.92■□□□□ 0.62
PHGDH-232ENST00000641947 CUL2Q13617 745 aa18.91■□□□□ 0.62
PHGDH-232ENST00000641947 BMS1Q14692 1282 aaKnown RBP18.91■□□□□ 0.62
PHGDH-232ENST00000641947 ZNF569Q5MCW4 686 aa18.91■□□□□ 0.62
PHGDH-232ENST00000641947 NOP9Q86U38 636 aaKnown RBP18.91■□□□□ 0.62
PHGDH-232ENST00000641947 RPAINQ86UA6 219 aa18.91■□□□□ 0.62
PHGDH-232ENST00000641947 KIF18AQ8NI77 898 aa18.91■□□□□ 0.62
PHGDH-232ENST00000641947 ANKRD36BP1Q96IX9 119 aa18.91■□□□□ 0.62
PHGDH-232ENST00000641947 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.91■□□□□ 0.625e-8■■□□□ 14.4
PHGDH-232ENST00000641947 ASB7Q9H672 318 aa18.91■□□□□ 0.62
PHGDH-232ENST00000641947 A0A1W2PQ45 241 aaPredicted RBP18.91■□□□□ 0.62
PHGDH-232ENST00000641947 A0A1W2PQY0 241 aa18.91■□□□□ 0.62
PHGDH-232ENST00000641947 FAM170AA1A519 330 aa18.91■□□□□ 0.62
PHGDH-232ENST00000641947 TNNC2P02585 160 aa18.91■□□□□ 0.62
PHGDH-232ENST00000641947 CHRNB2P17787 502 aa18.91■□□□□ 0.62
PHGDH-232ENST00000641947 ANXA13P27216 316 aa18.91■□□□□ 0.62
PHGDH-232ENST00000641947 AXLP30530 894 aa18.91■□□□□ 0.62
PHGDH-232ENST00000641947 KYAT1Q16773 422 aa18.91■□□□□ 0.62
PHGDH-232ENST00000641947 TRIM71Q2Q1W2 868 aaKnown RBP18.91■□□□□ 0.62
PHGDH-232ENST00000641947 UBR7Q8N806 425 aa18.91■□□□□ 0.62
PHGDH-232ENST00000641947 ZMAT2Q96NC0 199 aaKnown RBP18.91■□□□□ 0.62
PHGDH-232ENST00000641947 AGPAT1Q99943 283 aa18.91■□□□□ 0.62
PHGDH-232ENST00000641947 UNC93B1Q9H1C4 597 aa18.91■□□□□ 0.62
PHGDH-232ENST00000641947 MOXD2PA6NHM9 499 aa18.9■□□□□ 0.62
PHGDH-232ENST00000641947 KIF5CO60282 957 aa18.9■□□□□ 0.62
PHGDH-232ENST00000641947 CABYRO75952 493 aa18.9■□□□□ 0.62
PHGDH-232ENST00000641947 TUBB4AP04350 444 aa18.9■□□□□ 0.62
PHGDH-232ENST00000641947 NAB2Q15742 525 aa18.9■□□□□ 0.62
PHGDH-232ENST00000641947 ALKBH5Q6P6C2 394 aaKnown RBP18.9■□□□□ 0.62
PHGDH-232ENST00000641947 ENOSF1Q7L5Y1 443 aa18.9■□□□□ 0.62
PHGDH-232ENST00000641947 ZNF710Q8N1W2 664 aa18.9■□□□□ 0.62
PHGDH-232ENST00000641947 U2AF1L4Q8WU68 220 aaKnown RBP18.9■□□□□ 0.62
PHGDH-232ENST00000641947 SNX27Q96L92 541 aa18.9■□□□□ 0.62
PHGDH-232ENST00000641947 RNF19AQ9NV58 838 aa18.9■□□□□ 0.62
PHGDH-232ENST00000641947 TAS2R14Q9NYV8 317 aa18.9■□□□□ 0.62
PHGDH-232ENST00000641947 MACROD2A1Z1Q3 448 aa18.89■□□□□ 0.61
PHGDH-232ENST00000641947 KRT86O43790 486 aa18.89■□□□□ 0.61
PHGDH-232ENST00000641947 THPOP40225 353 aa18.89■□□□□ 0.61
PHGDH-232ENST00000641947 NCBP1Q09161 790 aaKnown RBP18.89■□□□□ 0.61
PHGDH-232ENST00000641947 KIF5AQ12840 1032 aa18.89■□□□□ 0.61
PHGDH-232ENST00000641947 TMEM132DQ14C87 1099 aa18.89■□□□□ 0.61
PHGDH-232ENST00000641947 FMNL3Q8IVF7 1028 aa18.89■□□□□ 0.61
PHGDH-232ENST00000641947 SMG8Q8ND04 991 aaKnown RBP18.89■□□□□ 0.61
PHGDH-232ENST00000641947 DDX1Q92499 740 aaKnown RBP18.89■□□□□ 0.61
PHGDH-232ENST00000641947 PCDHB18PQ96TA0 734 aa18.89■□□□□ 0.61
PHGDH-232ENST00000641947 TSEN34Q9BSV6 310 aaKnown RBP18.89■□□□□ 0.61
PHGDH-232ENST00000641947 CCDC94Q9BW85 323 aaPredicted RBP18.89■□□□□ 0.61
PHGDH-232ENST00000641947 RNF39Q9H2S5 420 aa18.89■□□□□ 0.61
PHGDH-232ENST00000641947 AGO3Q9H9G7 860 aaKnown RBP18.89■□□□□ 0.61
PHGDH-232ENST00000641947 PTPN22Q9Y2R2 807 aa18.89■□□□□ 0.61
PHGDH-232ENST00000641947 CAPN6Q9Y6Q1 641 aa18.89■□□□□ 0.61
PHGDH-232ENST00000641947 M0QZ92 97 aa18.88■□□□□ 0.61
PHGDH-232ENST00000641947 RIOK3O14730 519 aaKnown RBP18.88■□□□□ 0.61
PHGDH-232ENST00000641947 RECQL4O94761 1208 aa18.88■□□□□ 0.61
PHGDH-232ENST00000641947 ITGB3P05106 788 aa18.88■□□□□ 0.61
PHGDH-232ENST00000641947 CCDC172P0C7W6 258 aa18.88■□□□□ 0.61
PHGDH-232ENST00000641947 KRT5P13647 590 aa18.88■□□□□ 0.61
PHGDH-232ENST00000641947 CYP11B1P15538 503 aa18.88■□□□□ 0.61
PHGDH-232ENST00000641947 AKAP5P24588 427 aa18.88■□□□□ 0.61
PHGDH-232ENST00000641947 MTFR1Q15390 333 aa18.88■□□□□ 0.61
PHGDH-232ENST00000641947 TAF3Q5VWG9 929 aa18.88■□□□□ 0.61
PHGDH-232ENST00000641947 ALKAL1Q6UXT8 129 aa18.88■□□□□ 0.61
PHGDH-232ENST00000641947 RSPH3Q86UC2 560 aa18.88■□□□□ 0.61
PHGDH-232ENST00000641947 RPUSD2Q8IZ73 545 aaKnown RBP18.88■□□□□ 0.61
PHGDH-232ENST00000641947 APOL6Q9BWW8 343 aa18.88■□□□□ 0.61
PHGDH-232ENST00000641947 POLIQ9UNA4 740 aa18.88■□□□□ 0.61
PHGDH-232ENST00000641947 ST3GAL5Q9UNP4 418 aa18.88■□□□□ 0.61
PHGDH-232ENST00000641947 MYCP01106 439 aaPredicted RBP18.88■□□□□ 0.61
PHGDH-232ENST00000641947 ASPAP45381 313 aa18.88■□□□□ 0.61
PHGDH-232ENST00000641947 FMO1Q01740 532 aa18.88■□□□□ 0.61
PHGDH-232ENST00000641947 TRPC3Q13507 836 aa18.88■□□□□ 0.61
PHGDH-232ENST00000641947 SGSM1Q2NKQ1 1148 aa18.88■□□□□ 0.61
PHGDH-232ENST00000641947 ZNF699Q32M78 642 aa18.88■□□□□ 0.61
PHGDH-232ENST00000641947 SLC43A3Q8NBI5 491 aa18.88■□□□□ 0.61
PHGDH-232ENST00000641947 GLT1D1Q96MS3 346 aa18.88■□□□□ 0.61
PHGDH-232ENST00000641947 TSGA10Q9BZW7 698 aa18.88■□□□□ 0.61
PHGDH-232ENST00000641947 TRIM6Q9C030 488 aaPredicted RBP18.88■□□□□ 0.61
PHGDH-232ENST00000641947 TRPV6Q9H1D0 765 aa18.88■□□□□ 0.61
PHGDH-232ENST00000641947 WBP1LQ9NX94 342 aa18.88■□□□□ 0.61
PHGDH-232ENST00000641947 C2CD2Q9Y426 696 aa18.88■□□□□ 0.61
PHGDH-232ENST00000641947 TMCO5BA8MYB1 307 aa18.87■□□□□ 0.61
PHGDH-232ENST00000641947 RPS6KA5O75582 802 aa18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms