RNA–Protein interactions for RNA: ENST00000641847.1

PHGDH-228, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 692 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-228ENST00000641847 SLC39A4Q6P5W5 647 aa10.24□□□□□ -0.77
PHGDH-228ENST00000641847 SYCE2Q6PIF2 218 aa10.24□□□□□ -0.77
PHGDH-228ENST00000641847 ZPBP2Q6X784 338 aa10.24□□□□□ -0.77
PHGDH-228ENST00000641847 CATSPER4Q7RTX7 472 aa10.24□□□□□ -0.77
PHGDH-228ENST00000641847 ZDHHC14Q8IZN3 488 aa10.24□□□□□ -0.77
PHGDH-228ENST00000641847 DTWD2Q8NBA8 298 aa10.24□□□□□ -0.77
PHGDH-228ENST00000641847 PRIMPOLQ96LW4 560 aa10.24□□□□□ -0.77
PHGDH-228ENST00000641847 DUSP9Q99956 384 aaKnown RBP10.24□□□□□ -0.77
PHGDH-228ENST00000641847 ADAM7Q9H2U9 754 aa10.24□□□□□ -0.77
PHGDH-228ENST00000641847 DLL3Q9NYJ7 618 aa10.24□□□□□ -0.77
PHGDH-228ENST00000641847 ANKFY1Q9P2R3 1169 aa10.24□□□□□ -0.77
PHGDH-228ENST00000641847 TRAF3IP3Q9Y228 551 aa10.24□□□□□ -0.77
PHGDH-228ENST00000641847 LZTS1Q9Y250 596 aa10.24□□□□□ -0.77
PHGDH-228ENST00000641847 USP20Q9Y2K6 914 aa10.24□□□□□ -0.77
PHGDH-228ENST00000641847 NFE2L3Q9Y4A8 694 aa10.24□□□□□ -0.77
PHGDH-228ENST00000641847 SQORQ9Y6N5 450 aa10.24□□□□□ -0.77
PHGDH-228ENST00000641847 CNTNAP2Q9UHC6 1331 aa10.24□□□□□ -0.77
PHGDH-228ENST00000641847 TTLL13PA6NNM8 815 aa10.23□□□□□ -0.77
PHGDH-228ENST00000641847 C2CD4DB7Z1M9 353 aa10.23□□□□□ -0.77
PHGDH-228ENST00000641847 ANKRD63C9JTQ0 380 aa10.23□□□□□ -0.77
PHGDH-228ENST00000641847 GOLGA6L19H0YKK7 550 aa10.23□□□□□ -0.77
PHGDH-228ENST00000641847 RBAK-RBAKDNI3L0D1 243 aa10.23□□□□□ -0.77
PHGDH-228ENST00000641847 CLIC2O15247 247 aa10.23□□□□□ -0.77
PHGDH-228ENST00000641847 IBSPP21815 317 aaPredicted RBP10.23□□□□□ -0.77
PHGDH-228ENST00000641847 EIF4BP23588 611 aaKnown RBP10.23□□□□□ -0.77
PHGDH-228ENST00000641847 NR2F2P24468 414 aa10.23□□□□□ -0.77
PHGDH-228ENST00000641847 CD52P31358 61 aa10.23□□□□□ -0.77
PHGDH-228ENST00000641847 CYP2J2P51589 502 aa10.23□□□□□ -0.77
PHGDH-228ENST00000641847 SNRPFP62306 86 aaKnown RBP10.23□□□□□ -0.77
PHGDH-228ENST00000641847 TPM4P67936 248 aa10.23□□□□□ -0.77
PHGDH-228ENST00000641847 KRT17Q04695 432 aa10.23□□□□□ -0.77
PHGDH-228ENST00000641847 NFIL3Q16649 462 aa10.23□□□□□ -0.77
PHGDH-228ENST00000641847 AMHR2Q16671 573 aa10.23□□□□□ -0.77
PHGDH-228ENST00000641847 ST3GAL2Q16842 350 aa10.23□□□□□ -0.77
PHGDH-228ENST00000641847 EDRF1Q3B7T1 1238 aa10.23□□□□□ -0.77
PHGDH-228ENST00000641847 ATAT1Q5SQI0 421 aa10.23□□□□□ -0.77
PHGDH-228ENST00000641847 ATF7IP2Q5U623 682 aa10.23□□□□□ -0.77
PHGDH-228ENST00000641847 PLPP4Q5VZY2 271 aa10.23□□□□□ -0.77
PHGDH-228ENST00000641847 ARMCX5Q6P1M9 558 aa10.23□□□□□ -0.77
PHGDH-228ENST00000641847 FOXR2Q6PJQ5 311 aa10.23□□□□□ -0.77
PHGDH-228ENST00000641847 LRRC55Q6ZSA7 311 aa10.23□□□□□ -0.77
PHGDH-228ENST00000641847 FAM228AQ86W67 206 aa10.23□□□□□ -0.77
PHGDH-228ENST00000641847 CSGALNACT2Q8N6G5 542 aa10.23□□□□□ -0.77
PHGDH-228ENST00000641847 VN1R2Q8NFZ6 395 aa10.23□□□□□ -0.77
PHGDH-228ENST00000641847 ACSF2Q96CM8 615 aaPredicted RBP10.23□□□□□ -0.77
PHGDH-228ENST00000641847 TCF25Q9BQ70 676 aa10.23□□□□□ -0.77
PHGDH-228ENST00000641847 CBWD1Q9BRT8 395 aa10.23□□□□□ -0.77
PHGDH-228ENST00000641847 TARS2Q9BW92 718 aaKnown RBP10.23□□□□□ -0.77
PHGDH-228ENST00000641847 CGNQ9P2M7 1197 aaKnown RBP10.23□□□□□ -0.77
PHGDH-228ENST00000641847 LIMD1Q9UGP4 676 aa10.23□□□□□ -0.77
PHGDH-228ENST00000641847 ATRXP46100 2492 aa10.22□□□□□ -0.77
PHGDH-228ENST00000641847 GOLGA6L3A6NEY3 463 aa10.22□□□□□ -0.77
PHGDH-228ENST00000641847 TBKBP1A7MCY6 615 aa10.22□□□□□ -0.77
PHGDH-228ENST00000641847 RPS6KA5O75582 802 aa10.22□□□□□ -0.77
PHGDH-228ENST00000641847 ASGR2P07307 311 aa10.22□□□□□ -0.77
PHGDH-228ENST00000641847 HARSP12081 509 aaKnown RBP10.22□□□□□ -0.77
PHGDH-228ENST00000641847 LAG3P18627 525 aa10.22□□□□□ -0.77
PHGDH-228ENST00000641847 GARTP22102 1010 aa10.22□□□□□ -0.77
PHGDH-228ENST00000641847 MATR3P43243 847 aaKnown RBP eCLIP10.22□□□□□ -0.77
PHGDH-228ENST00000641847 ERVFC1P60507 584 aa10.22□□□□□ -0.77
PHGDH-228ENST00000641847 PCBP1Q15365 356 aaKnown RBP eCLIP10.22□□□□□ -0.77
PHGDH-228ENST00000641847 ZNF568Q3ZCX4 644 aa10.22□□□□□ -0.77
PHGDH-228ENST00000641847 KIAA0319Q5VV43 1072 aa10.22□□□□□ -0.77
PHGDH-228ENST00000641847 MPZL3Q6UWV2 235 aa10.22□□□□□ -0.77
PHGDH-228ENST00000641847 TMC7Q7Z402 723 aa10.22□□□□□ -0.77
PHGDH-228ENST00000641847 C12orf56Q8IXR9 622 aa10.22□□□□□ -0.77
PHGDH-228ENST00000641847 ZC3H3Q8IXZ2 948 aaKnown RBP10.22□□□□□ -0.77
PHGDH-228ENST00000641847 NOC3LQ8WTT2 800 aaKnown RBP10.22□□□□□ -0.77
PHGDH-228ENST00000641847 POMGNT1Q8WZA1 660 aa10.22□□□□□ -0.77
PHGDH-228ENST00000641847 EEF2KMTQ96G04 330 aa10.22□□□□□ -0.77
PHGDH-228ENST00000641847 CPB2Q96IY4 423 aa10.22□□□□□ -0.77
PHGDH-228ENST00000641847 ACO2Q99798 780 aaKnown RBP10.22□□□□□ -0.77
PHGDH-228ENST00000641847 SRRTQ9BXP5 876 aaKnown RBP10.22□□□□□ -0.77
PHGDH-228ENST00000641847 POMKQ9H5K3 350 aa10.22□□□□□ -0.77
PHGDH-228ENST00000641847 THAP9Q9H5L6 903 aa10.22□□□□□ -0.77
PHGDH-228ENST00000641847 PDZD7Q9H5P4 517 aa10.22□□□□□ -0.77
PHGDH-228ENST00000641847 FANCLQ9NW38 375 aa10.22□□□□□ -0.77
PHGDH-228ENST00000641847 HSPBP1Q9NZL4 362 aa10.22□□□□□ -0.77
PHGDH-228ENST00000641847 USTQ9Y2C2 406 aa10.22□□□□□ -0.77
PHGDH-228ENST00000641847 NOC2LQ9Y3T9 749 aaKnown RBP10.22□□□□□ -0.77
PHGDH-228ENST00000641847 TTC3P53804 2025 aa10.21□□□□□ -0.77
PHGDH-228ENST00000641847 ABLIM1O14639 778 aa10.21□□□□□ -0.77
PHGDH-228ENST00000641847 FSCN2O14926 492 aa10.21□□□□□ -0.77
PHGDH-228ENST00000641847 N4BP3O15049 544 aa10.21□□□□□ -0.77
PHGDH-228ENST00000641847 CETN3O15182 167 aa10.21□□□□□ -0.77
PHGDH-228ENST00000641847 SLC16A3O15427 465 aaKnown RBP10.21□□□□□ -0.77
PHGDH-228ENST00000641847 TOM1L1O75674 476 aa10.21□□□□□ -0.77
PHGDH-228ENST00000641847 FGFR1OPO95684 399 aaKnown RBP10.21□□□□□ -0.77
PHGDH-228ENST00000641847 ARF4P18085 180 aaPredicted RBP10.21□□□□□ -0.77
PHGDH-228ENST00000641847 PROZP22891 400 aa10.21□□□□□ -0.77
PHGDH-228ENST00000641847 RPL13P26373 211 aaKnown RBP10.21□□□□□ -0.77
PHGDH-228ENST00000641847 ADSSP30520 456 aa10.21□□□□□ -0.77
PHGDH-228ENST00000641847 PPM1AP35813 382 aa10.21□□□□□ -0.77
PHGDH-228ENST00000641847 FKBP3Q00688 224 aaKnown RBP10.21□□□□□ -0.77
PHGDH-228ENST00000641847 NCBP1Q09161 790 aaKnown RBP10.21□□□□□ -0.77
PHGDH-228ENST00000641847 ADAM9Q13443 819 aa10.21□□□□□ -0.77
PHGDH-228ENST00000641847 TDGQ13569 410 aa10.21□□□□□ -0.77
PHGDH-228ENST00000641847 KCNC3Q14003 757 aa10.21□□□□□ -0.77
PHGDH-228ENST00000641847 NOLC1Q14978 699 aaKnown RBP eCLIP10.21□□□□□ -0.77
PHGDH-228ENST00000641847 RSPO4Q2I0M5 234 aaPredicted RBP10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 126.2 ms