RNA–Protein interactions for RNA: ENST00000641375.1

PHGDH-216, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,196 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-216ENST00000641375 APOBEC3GQ9HC16 384 aaKnown RBP17.64■□□□□ 0.42
PHGDH-216ENST00000641375 GRID2IPA4D2P6 1211 aa17.64■□□□□ 0.41
PHGDH-216ENST00000641375 SRGAP2O75044 1071 aa17.64■□□□□ 0.41
PHGDH-216ENST00000641375 GPR32O75388 356 aa17.64■□□□□ 0.41
PHGDH-216ENST00000641375 TBC1D8O95759 1140 aa17.64■□□□□ 0.41
PHGDH-216ENST00000641375 CXCL8P10145 99 aa17.64■□□□□ 0.41
PHGDH-216ENST00000641375 CHRNB2P17787 502 aa17.64■□□□□ 0.41
PHGDH-216ENST00000641375 FLT3LGP49771 235 aa17.64■□□□□ 0.41
PHGDH-216ENST00000641375 PURAQ00577 322 aaKnown RBP17.64■□□□□ 0.41
PHGDH-216ENST00000641375 GPR161Q8N6U8 529 aaKnown RBP17.64■□□□□ 0.41
PHGDH-216ENST00000641375 TRIB2Q92519 343 aa17.64■□□□□ 0.41
PHGDH-216ENST00000641375 ELMO3Q96BJ8 720 aa17.64■□□□□ 0.41
PHGDH-216ENST00000641375 OSBPL9Q96SU4 736 aa17.64■□□□□ 0.41
PHGDH-216ENST00000641375 TLR10Q9BXR5 811 aa17.64■□□□□ 0.41
PHGDH-216ENST00000641375 CST3P01034 146 aaPredicted RBP17.63■□□□□ 0.41
PHGDH-216ENST00000641375 FTLP02792 175 aaPredicted RBP17.63■□□□□ 0.41
PHGDH-216ENST00000641375 ABCB4P21439 1286 aa17.63■□□□□ 0.41
PHGDH-216ENST00000641375 IRX5P78411 483 aaPredicted RBP17.63■□□□□ 0.41
PHGDH-216ENST00000641375 FMO1Q01740 532 aa17.63■□□□□ 0.41
PHGDH-216ENST00000641375 TEX35Q5T0J7 233 aa17.63■□□□□ 0.41
PHGDH-216ENST00000641375 MEI1Q5TIA1 1274 aa17.63■□□□□ 0.41
PHGDH-216ENST00000641375 DNAAF5Q86Y56 855 aa17.63■□□□□ 0.41
PHGDH-216ENST00000641375 RHOT2Q8IXI1 618 aa17.63■□□□□ 0.41
PHGDH-216ENST00000641375 TPCN2Q8NHX9 752 aa17.63■□□□□ 0.41
PHGDH-216ENST00000641375 SPC25Q9HBM1 224 aa17.63■□□□□ 0.41
PHGDH-216ENST00000641375 TAS2R14Q9NYV8 317 aa17.63■□□□□ 0.41
PHGDH-216ENST00000641375 GABRQQ9UN88 632 aa17.63■□□□□ 0.41
PHGDH-216ENST00000641375 NUB1Q9Y5A7 615 aa17.63■□□□□ 0.41
PHGDH-216ENST00000641375 PCNTO95613 3336 aa17.63■□□□□ 0.41
PHGDH-216ENST00000641375 C17orf102A2RUQ5 167 aa17.63■□□□□ 0.41
PHGDH-216ENST00000641375 MMEP08473 750 aa17.63■□□□□ 0.41
PHGDH-216ENST00000641375 C6orf222P0C671 652 aaPredicted RBP17.63■□□□□ 0.41
PHGDH-216ENST00000641375 GJA9P57773 515 aa17.63■□□□□ 0.41
PHGDH-216ENST00000641375 DCAF4L1Q3SXM0 396 aa17.63■□□□□ 0.41
PHGDH-216ENST00000641375 EFCAB13Q8IY85 973 aa17.63■□□□□ 0.41
PHGDH-216ENST00000641375 PDCL2Q8N4E4 241 aa17.63■□□□□ 0.41
PHGDH-216ENST00000641375 C7orf31Q8N865 590 aa17.63■□□□□ 0.41
PHGDH-216ENST00000641375 TRPV1Q8NER1 839 aa17.63■□□□□ 0.41
PHGDH-216ENST00000641375 SLC35G2Q8TBE7 412 aa17.63■□□□□ 0.41
PHGDH-216ENST00000641375 DDX1Q92499 740 aaKnown RBP17.63■□□□□ 0.41
PHGDH-216ENST00000641375 ACP6Q9NPH0 428 aa17.63■□□□□ 0.41
PHGDH-216ENST00000641375 CNTN6Q9UQ52 1028 aa17.63■□□□□ 0.41
PHGDH-216ENST00000641375 CITO14578 2027 aa17.62■□□□□ 0.41
PHGDH-216ENST00000641375 TRIP12Q14669 1992 aaPredicted RBP17.62■□□□□ 0.41
PHGDH-216ENST00000641375 ACO1P21399 889 aaKnown RBP17.62■□□□□ 0.41
PHGDH-216ENST00000641375 DEFB115Q30KQ5 88 aa17.62■□□□□ 0.41
PHGDH-216ENST00000641375 TMEM192Q8IY95 271 aa17.62■□□□□ 0.41
PHGDH-216ENST00000641375 LRRC57Q8N9N7 239 aa17.62■□□□□ 0.41
PHGDH-216ENST00000641375 CAGE1Q8TC20 777 aa17.62■□□□□ 0.41
PHGDH-216ENST00000641375 TAF4BQ92750 862 aa17.62■□□□□ 0.41
PHGDH-216ENST00000641375 THAP2Q9H0W7 228 aa17.62■□□□□ 0.41
PHGDH-216ENST00000641375 GINS2Q9Y248 185 aa17.62■□□□□ 0.41
PHGDH-216ENST00000641375 FTCDO95954 541 aa17.62■□□□□ 0.41
PHGDH-216ENST00000641375 TFRCP02786 760 aaKnown RBP17.62■□□□□ 0.41
PHGDH-216ENST00000641375 MYL6P60660 151 aa17.62■□□□□ 0.41
PHGDH-216ENST00000641375 GPC5P78333 572 aa17.62■□□□□ 0.41
PHGDH-216ENST00000641375 TMEM62Q0P6H9 643 aa17.62■□□□□ 0.41
PHGDH-216ENST00000641375 CATSPER4Q7RTX7 472 aa17.62■□□□□ 0.41
PHGDH-216ENST00000641375 NME8Q8N427 588 aa17.62■□□□□ 0.41
PHGDH-216ENST00000641375 CAPZA3Q96KX2 299 aa17.62■□□□□ 0.41
PHGDH-216ENST00000641375 CAPNS2Q96L46 248 aa17.62■□□□□ 0.41
PHGDH-216ENST00000641375 ACAP3Q96P50 834 aa17.62■□□□□ 0.41
PHGDH-216ENST00000641375 PCDHB18PQ96TA0 734 aa17.62■□□□□ 0.41
PHGDH-216ENST00000641375 RNF14Q9UBS8 474 aa17.62■□□□□ 0.41
PHGDH-216ENST00000641375 PCDHB4Q9Y5E5 795 aa17.62■□□□□ 0.41
PHGDH-216ENST00000641375 LACTBL1A8MY62 500 aa17.61■□□□□ 0.41
PHGDH-216ENST00000641375 SEPT4O43236 478 aa17.61■□□□□ 0.41
PHGDH-216ENST00000641375 DARSP14868 501 aaKnown RBP17.61■□□□□ 0.41
PHGDH-216ENST00000641375 HOXC8P31273 242 aa17.61■□□□□ 0.41
PHGDH-216ENST00000641375 HADHBP55084 474 aaKnown RBP17.61■□□□□ 0.41
PHGDH-216ENST00000641375 SP3Q02447 781 aa17.61■□□□□ 0.41
PHGDH-216ENST00000641375 PRKCZQ05513 592 aa17.61■□□□□ 0.41
PHGDH-216ENST00000641375 TCEAL1Q15170 157 aa17.61■□□□□ 0.41
PHGDH-216ENST00000641375 ZNF699Q32M78 642 aa17.61■□□□□ 0.41
PHGDH-216ENST00000641375 GNASQ5JWF2 1037 aa17.61■□□□□ 0.41
PHGDH-216ENST00000641375 TMEM270Q6UE05 265 aa17.61■□□□□ 0.41
PHGDH-216ENST00000641375 RUFY4Q6ZNE9 571 aa17.61■□□□□ 0.41
PHGDH-216ENST00000641375 NT5DC4Q86YG4 428 aa17.61■□□□□ 0.41
PHGDH-216ENST00000641375 CD302Q8IX05 232 aa17.61■□□□□ 0.41
PHGDH-216ENST00000641375 DNAJB3Q8WWF6 145 aa17.61■□□□□ 0.41
PHGDH-216ENST00000641375 FAXDC2Q96IV6 333 aa17.61■□□□□ 0.41
PHGDH-216ENST00000641375 NIF3L1Q9GZT8 377 aa17.61■□□□□ 0.41
PHGDH-216ENST00000641375 ZNF185O15231 689 aa17.6■□□□□ 0.41
PHGDH-216ENST00000641375 TREHO43280 583 aa17.6■□□□□ 0.41
PHGDH-216ENST00000641375 NCK2O43639 380 aa17.6■□□□□ 0.41
PHGDH-216ENST00000641375 AOC2O75106 756 aa17.6■□□□□ 0.41
PHGDH-216ENST00000641375 EIF4BP23588 611 aaKnown RBP17.6■□□□□ 0.41
PHGDH-216ENST00000641375 AXLP30530 894 aa17.6■□□□□ 0.41
PHGDH-216ENST00000641375 NOTUMQ6P988 496 aa17.6■□□□□ 0.41
PHGDH-216ENST00000641375 SLFN11Q7Z7L1 901 aa17.6■□□□□ 0.41
PHGDH-216ENST00000641375 DAAM2Q86T65 1068 aa17.6■□□□□ 0.41
PHGDH-216ENST00000641375 CREG2Q8IUH2 290 aa17.6■□□□□ 0.41
PHGDH-216ENST00000641375 MMS19Q96T76 1030 aa17.6■□□□□ 0.41
PHGDH-216ENST00000641375 OSMRQ99650 979 aa17.6■□□□□ 0.41
PHGDH-216ENST00000641375 MTG1Q9BT17 334 aaPredicted RBP17.6■□□□□ 0.41
PHGDH-216ENST00000641375 UPF3AQ9H1J1 476 aaKnown RBP17.6■□□□□ 0.41
PHGDH-216ENST00000641375 MROH7Q68CQ1 1323 aa17.6■□□□□ 0.41
PHGDH-216ENST00000641375 RARBP10826 455 aa17.6■□□□□ 0.41
PHGDH-216ENST00000641375 GRM5P41594 1212 aa17.6■□□□□ 0.41
PHGDH-216ENST00000641375 GABPB1Q06547 395 aaPredicted RBP17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms