RNA–Protein interactions for RNA: ENST00000640957.1

SCARB2-227, Transcript of scavenger receptor class B member 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCARB2, Length 3,255 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-227ENST00000640957 PARP2Q9UGN5 583 aa14.61□□□□□ -0.07
SCARB2-227ENST00000640957 SKIP12755 728 aa14.6□□□□□ -0.07
SCARB2-227ENST00000640957 MYL7Q01449 175 aa14.6□□□□□ -0.07
SCARB2-227ENST00000640957 IZUMO2Q6UXV1 221 aa14.6□□□□□ -0.07
SCARB2-227ENST00000640957 DCLRE1BQ9H816 532 aa14.6□□□□□ -0.07
SCARB2-227ENST00000640957 CLIC5Q9NZA1 410 aa14.6□□□□□ -0.07
SCARB2-227ENST00000640957 PCYOX1Q9UHG3 505 aa14.6□□□□□ -0.07
SCARB2-227ENST00000640957 TOGARAM1Q9Y4F4 1720 aa14.6□□□□□ -0.07
SCARB2-227ENST00000640957 A0A0A6YYK5 440 aaPredicted RBP14.6□□□□□ -0.07
SCARB2-227ENST00000640957 DDX39AO00148 427 aaKnown RBP14.6□□□□□ -0.07
SCARB2-227ENST00000640957 FAM13AO94988 1023 aa14.6□□□□□ -0.07
SCARB2-227ENST00000640957 TJP3O95049 919 aa14.6□□□□□ -0.07
SCARB2-227ENST00000640957 BMP3P12645 472 aa14.6□□□□□ -0.07
SCARB2-227ENST00000640957 EEF2P13639 858 aaKnown RBP14.6□□□□□ -0.07
SCARB2-227ENST00000640957 CD58P19256 250 aa14.6□□□□□ -0.07
SCARB2-227ENST00000640957 CTNNA2P26232 953 aa14.6□□□□□ -0.07
SCARB2-227ENST00000640957 GAD2Q05329 585 aa14.6□□□□□ -0.07
SCARB2-227ENST00000640957 EDRF1Q3B7T1 1238 aa14.6□□□□□ -0.07
SCARB2-227ENST00000640957 TNFAIP8L3Q5GJ75 292 aa14.6□□□□□ -0.07
SCARB2-227ENST00000640957 MFSD5Q6N075 450 aa14.6□□□□□ -0.07
SCARB2-227ENST00000640957 FAM81AQ8TBF8 368 aa14.6□□□□□ -0.07
SCARB2-227ENST00000640957 FAM136AQ96C01 138 aa14.6□□□□□ -0.07
SCARB2-227ENST00000640957 KRT4P19013 534 aa14.6□□□□□ -0.07
SCARB2-227ENST00000640957 RTP1P59025 263 aa14.6□□□□□ -0.07
SCARB2-227ENST00000640957 GPC5P78333 572 aa14.6□□□□□ -0.07
SCARB2-227ENST00000640957 PDCD2Q16342 344 aaPredicted RBP14.6□□□□□ -0.07
SCARB2-227ENST00000640957 ATP13A4Q4VNC1 1196 aa14.6□□□□□ -0.07
SCARB2-227ENST00000640957 IZUMO3Q5VZ72 239 aa14.6□□□□□ -0.07
SCARB2-227ENST00000640957 ZNF365Q70YC5 407 aa14.6□□□□□ -0.07
SCARB2-227ENST00000640957 SEPT12Q8IYM1 358 aa14.6□□□□□ -0.07
SCARB2-227ENST00000640957 CFAP61Q8NHU2 1237 aa14.6□□□□□ -0.07
SCARB2-227ENST00000640957 ZNF395Q9H8N7 513 aaPredicted RBP14.6□□□□□ -0.07
SCARB2-227ENST00000640957 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.6□□□□□ -0.07
SCARB2-227ENST00000640957 PCDHA1Q9Y5I3 950 aa14.6□□□□□ -0.07
SCARB2-227ENST00000640957 SLC4A7Q9Y6M7 1214 aa14.6□□□□□ -0.07
SCARB2-227ENST00000640957 KRT10P13645 584 aa14.59□□□□□ -0.07
SCARB2-227ENST00000640957 ACADSP16219 412 aa14.59□□□□□ -0.07
SCARB2-227ENST00000640957 RPL13P26373 211 aaKnown RBP14.59□□□□□ -0.07
SCARB2-227ENST00000640957 SIX1Q15475 284 aaPredicted RBP14.59□□□□□ -0.07
SCARB2-227ENST00000640957 SMAD1Q15797 465 aaKnown RBP14.59□□□□□ -0.07
SCARB2-227ENST00000640957 CNPY1Q3B7I2 92 aa14.59□□□□□ -0.07
SCARB2-227ENST00000640957 TRMT10CQ7L0Y3 403 aaKnown RBP14.59□□□□□ -0.07
SCARB2-227ENST00000640957 NEDD1Q8NHV4 660 aa14.59□□□□□ -0.07
SCARB2-227ENST00000640957 P2RX7Q99572 595 aaKnown RBP14.59□□□□□ -0.07
SCARB2-227ENST00000640957 RTFDC1Q9BY42 306 aaPredicted RBP14.59□□□□□ -0.07
SCARB2-227ENST00000640957 KIAA1586Q9HCI6 787 aa14.59□□□□□ -0.07
SCARB2-227ENST00000640957 NENFQ9UMX5 172 aa14.59□□□□□ -0.07
SCARB2-227ENST00000640957 RPS6KL1Q9Y6S9 549 aa14.59□□□□□ -0.07
SCARB2-227ENST00000640957 EMSYQ7Z589 1322 aa14.59□□□□□ -0.07
SCARB2-227ENST00000640957 PGM3O95394 542 aa14.59□□□□□ -0.07
SCARB2-227ENST00000640957 TM4SF1P30408 202 aa14.59□□□□□ -0.07
SCARB2-227ENST00000640957 INHBCP55103 352 aa14.59□□□□□ -0.07
SCARB2-227ENST00000640957 MARSP56192 900 aaKnown RBP14.59□□□□□ -0.07
SCARB2-227ENST00000640957 P3H1Q32P28 736 aa14.59□□□□□ -0.07
SCARB2-227ENST00000640957 CLNKQ7Z7G1 428 aa14.59□□□□□ -0.07
SCARB2-227ENST00000640957 PPFIBP2Q8ND30 876 aa14.59□□□□□ -0.07
SCARB2-227ENST00000640957 ITFG2Q969R8 447 aa14.59□□□□□ -0.07
SCARB2-227ENST00000640957 DDX18Q9NVP1 670 aaKnown RBP14.59□□□□□ -0.07
SCARB2-227ENST00000640957 GALNT8Q9NY28 637 aa14.59□□□□□ -0.07
SCARB2-227ENST00000640957 APEX2Q9UBZ4 518 aa14.59□□□□□ -0.07
SCARB2-227ENST00000640957 ANAPC7Q9UJX3 599 aa14.59□□□□□ -0.07
SCARB2-227ENST00000640957 ZBTB21Q9ULJ3 1066 aa14.59□□□□□ -0.07
SCARB2-227ENST00000640957 CHMP2BQ9UQN3 213 aa14.59□□□□□ -0.07
SCARB2-227ENST00000640957 USP20Q9Y2K6 914 aa14.59□□□□□ -0.07
SCARB2-227ENST00000640957 MYH14Q7Z406 1995 aaKnown RBP14.59□□□□□ -0.07
SCARB2-227ENST00000640957 H3BRJ5 948 aa14.58□□□□□ -0.07
SCARB2-227ENST00000640957 EML1O00423 815 aa14.58□□□□□ -0.07
SCARB2-227ENST00000640957 CDH16O75309 829 aa14.58□□□□□ -0.07
SCARB2-227ENST00000640957 ENO1P06733 434 aaKnown RBP14.58□□□□□ -0.07
SCARB2-227ENST00000640957 PSMC2P35998 433 aaKnown RBP14.58□□□□□ -0.07
SCARB2-227ENST00000640957 CCNG1P51959 295 aa14.58□□□□□ -0.07
SCARB2-227ENST00000640957 DRG2P55039 364 aaKnown RBP14.58□□□□□ -0.07
SCARB2-227ENST00000640957 SPARCL1Q14515 664 aa14.58□□□□□ -0.07
SCARB2-227ENST00000640957 NOP9Q86U38 636 aaKnown RBP14.58□□□□□ -0.07
SCARB2-227ENST00000640957 SLF2Q8IX21 1173 aa14.58□□□□□ -0.07
SCARB2-227ENST00000640957 PTPRN2Q92932 1015 aa14.58□□□□□ -0.07
SCARB2-227ENST00000640957 ROPN1BQ9BZX4 212 aaPredicted RBP14.58□□□□□ -0.07
SCARB2-227ENST00000640957 ROPN1Q9HAT0 212 aaPredicted RBP14.58□□□□□ -0.07
SCARB2-227ENST00000640957 KRT82Q9NSB4 513 aa14.58□□□□□ -0.07
SCARB2-227ENST00000640957 TYW1Q9NV66 732 aaKnown RBP14.58□□□□□ -0.07
SCARB2-227ENST00000640957 SLC17A7Q9P2U7 560 aa14.58□□□□□ -0.07
SCARB2-227ENST00000640957 SERPINB13Q9UIV8 391 aa14.58□□□□□ -0.07
SCARB2-227ENST00000640957 MAP3K7O43318 606 aa14.58□□□□□ -0.08
SCARB2-227ENST00000640957 HLA-DOAP06340 250 aa14.58□□□□□ -0.08
SCARB2-227ENST00000640957 RALAP11233 206 aa14.58□□□□□ -0.08
SCARB2-227ENST00000640957 ATP5DP30049 168 aa14.58□□□□□ -0.08
SCARB2-227ENST00000640957 NFIAQ12857 509 aa14.58□□□□□ -0.08
SCARB2-227ENST00000640957 WDR72Q3MJ13 1102 aa14.58□□□□□ -0.08
SCARB2-227ENST00000640957 SLC10A5Q5PT55 438 aa14.58□□□□□ -0.08
SCARB2-227ENST00000640957 PCNX4Q63HM2 1172 aa14.58□□□□□ -0.08
SCARB2-227ENST00000640957 ZBED8Q8IZ13 594 aa14.58□□□□□ -0.08
SCARB2-227ENST00000640957 ANKRD35Q8N283 1001 aa14.58□□□□□ -0.08
SCARB2-227ENST00000640957 ZNF513Q8N8E2 541 aaPredicted RBP14.58□□□□□ -0.08
SCARB2-227ENST00000640957 C10orf82Q8WW14 230 aa14.58□□□□□ -0.08
SCARB2-227ENST00000640957 MAML1Q92585 1016 aa14.58□□□□□ -0.08
SCARB2-227ENST00000640957 SNF8Q96H20 258 aa14.58□□□□□ -0.08
SCARB2-227ENST00000640957 RBM17Q96I25 401 aaKnown RBP14.58□□□□□ -0.08
SCARB2-227ENST00000640957 MAK16Q9BXY0 300 aaKnown RBP14.58□□□□□ -0.08
SCARB2-227ENST00000640957 FHDC1Q9C0D6 1143 aaPredicted RBP14.58□□□□□ -0.08
SCARB2-227ENST00000640957 PPP1R1BQ9UD71 204 aaPredicted RBP14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms