RNA–Protein interactions for RNA: ENST00000640748.1

ERGIC3-220, Transcript of ERGIC and golgi 3, humanhuman

TSL 5 BASIC

Gene ERGIC3, Length 832 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-220ENST00000640748 KCTD10Q9H3F6 313 aa12.95□□□□□ -0.34
ERGIC3-220ENST00000640748 IFT122Q9HBG6 1241 aa12.95□□□□□ -0.34
ERGIC3-220ENST00000640748 FAM105AQ9NUU6 356 aa12.95□□□□□ -0.34
ERGIC3-220ENST00000640748 SUCLA2Q9P2R7 463 aaPredicted RBP12.95□□□□□ -0.34
ERGIC3-220ENST00000640748 DNAJB4Q9UDY4 337 aa12.95□□□□□ -0.34
ERGIC3-220ENST00000640748 SORCS3Q9UPU3 1222 aa12.95□□□□□ -0.34
ERGIC3-220ENST00000640748 MYO10Q9HD67 2058 aa12.94□□□□□ -0.34
ERGIC3-220ENST00000640748 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.94□□□□□ -0.34
ERGIC3-220ENST00000640748 PRPF6O94906 941 aaKnown RBP12.94□□□□□ -0.34
ERGIC3-220ENST00000640748 GNA14O95837 355 aa12.94□□□□□ -0.34
ERGIC3-220ENST00000640748 ASGR2P07307 311 aa12.94□□□□□ -0.34
ERGIC3-220ENST00000640748 CTSAP10619 480 aa12.94□□□□□ -0.34
ERGIC3-220ENST00000640748 MAPTP10636 758 aaKnown RBP12.94□□□□□ -0.34
ERGIC3-220ENST00000640748 SKILP12757 684 aa12.94□□□□□ -0.34
ERGIC3-220ENST00000640748 MTHFRP42898 656 aa12.94□□□□□ -0.34
ERGIC3-220ENST00000640748 DNM2P50570 870 aa12.94□□□□□ -0.34
ERGIC3-220ENST00000640748 POLGP54098 1239 aaPredicted RBP12.94□□□□□ -0.34
ERGIC3-220ENST00000640748 CCZ1BP86790 482 aa12.94□□□□□ -0.34
ERGIC3-220ENST00000640748 CCZ1P86791 482 aaPredicted RBP12.94□□□□□ -0.34
ERGIC3-220ENST00000640748 UBXN1Q04323 297 aa12.94□□□□□ -0.34
ERGIC3-220ENST00000640748 MTMR3Q13615 1198 aa12.94□□□□□ -0.34
ERGIC3-220ENST00000640748 TRIM14Q14142 442 aa12.94□□□□□ -0.34
ERGIC3-220ENST00000640748 KNOP1Q1ED39 458 aaKnown RBP12.94□□□□□ -0.34
ERGIC3-220ENST00000640748 XKR9Q5GH70 373 aa12.94□□□□□ -0.34
ERGIC3-220ENST00000640748 NOMO2Q5JPE7 1267 aa12.94□□□□□ -0.34
ERGIC3-220ENST00000640748 PLA2G4FQ68DD2 849 aa12.94□□□□□ -0.34
ERGIC3-220ENST00000640748 TWF2Q6IBS0 349 aaKnown RBP12.94□□□□□ -0.34
ERGIC3-220ENST00000640748 KIAA1841Q6NSI8 718 aa12.94□□□□□ -0.34
ERGIC3-220ENST00000640748 CES5AQ6NT32 575 aa12.94□□□□□ -0.34
ERGIC3-220ENST00000640748 ZBTB33Q86T24 672 aa12.94□□□□□ -0.34
ERGIC3-220ENST00000640748 ZNF410Q86VK4 478 aa12.94□□□□□ -0.34
ERGIC3-220ENST00000640748 ZNF280BQ86YH2 543 aa12.94□□□□□ -0.34
ERGIC3-220ENST00000640748 RHPN2Q8IUC4 686 aa12.94□□□□□ -0.34
ERGIC3-220ENST00000640748 UBALD2Q8IYN6 164 aa12.94□□□□□ -0.34
ERGIC3-220ENST00000640748 TMEM105Q8N8V8 129 aa12.94□□□□□ -0.34
ERGIC3-220ENST00000640748 TMEM169Q96HH4 297 aa12.94□□□□□ -0.34
ERGIC3-220ENST00000640748 PIN4Q9Y237 131 aaKnown RBP12.94□□□□□ -0.34
ERGIC3-220ENST00000640748 VPS13AQ96RL7 3174 aa12.93□□□□□ -0.34
ERGIC3-220ENST00000640748 A0A1W2PQC6 194 aa12.93□□□□□ -0.34
ERGIC3-220ENST00000640748 SFI1A8K8P3 1242 aa12.93□□□□□ -0.34
ERGIC3-220ENST00000640748 AKR1B15C9JRZ8 316 aaPredicted RBP12.93□□□□□ -0.34
ERGIC3-220ENST00000640748 H0Y858 1186 aa12.93□□□□□ -0.34
ERGIC3-220ENST00000640748 PES1O00541 588 aaKnown RBP12.93□□□□□ -0.34
ERGIC3-220ENST00000640748 PDXKO00764 312 aa12.93□□□□□ -0.34
ERGIC3-220ENST00000640748 CETN3O15182 167 aa12.93□□□□□ -0.34
ERGIC3-220ENST00000640748 GALR2O43603 387 aaPredicted RBP12.93□□□□□ -0.34
ERGIC3-220ENST00000640748 USO1O60763 962 aaKnown RBP12.93□□□□□ -0.34
ERGIC3-220ENST00000640748 NMT1P30419 496 aaKnown RBP12.93□□□□□ -0.34
ERGIC3-220ENST00000640748 SLC11A1P49279 550 aa12.93□□□□□ -0.34
ERGIC3-220ENST00000640748 CASP5P51878 434 aa12.93□□□□□ -0.34
ERGIC3-220ENST00000640748 CDC42EP1Q00587 391 aa12.93□□□□□ -0.34
ERGIC3-220ENST00000640748 MAPK7Q13164 816 aa12.93□□□□□ -0.34
ERGIC3-220ENST00000640748 ALCAMQ13740 583 aa12.93□□□□□ -0.34
ERGIC3-220ENST00000640748 PTPN14Q15678 1187 aa12.93□□□□□ -0.34
ERGIC3-220ENST00000640748 MAN2A1Q16706 1144 aa12.93□□□□□ -0.34
ERGIC3-220ENST00000640748 CCDC40Q4G0X9 1142 aa12.93□□□□□ -0.34
ERGIC3-220ENST00000640748 GLB1LQ6UWU2 654 aa12.93□□□□□ -0.34
ERGIC3-220ENST00000640748 AGMOQ6ZNB7 445 aa12.93□□□□□ -0.34
ERGIC3-220ENST00000640748 ZC3H3Q8IXZ2 948 aaKnown RBP12.93□□□□□ -0.34
ERGIC3-220ENST00000640748 ZDHHC14Q8IZN3 488 aa12.93□□□□□ -0.34
ERGIC3-220ENST00000640748 RSPH1Q8WYR4 309 aa12.93□□□□□ -0.34
ERGIC3-220ENST00000640748 DRC1Q96MC2 740 aa12.93□□□□□ -0.34
ERGIC3-220ENST00000640748 MINDY3Q9H8M7 445 aa12.93□□□□□ -0.34
ERGIC3-220ENST00000640748 POLD4Q9HCU8 107 aa12.93□□□□□ -0.34
ERGIC3-220ENST00000640748 DZANK1Q9NVP4 752 aa12.93□□□□□ -0.34
ERGIC3-220ENST00000640748 LARSQ9P2J5 1176 aaKnown RBP12.93□□□□□ -0.34
ERGIC3-220ENST00000640748 LIMD1Q9UGP4 676 aa12.93□□□□□ -0.34
ERGIC3-220ENST00000640748 TRAF3IP3Q9Y228 551 aa12.93□□□□□ -0.34
ERGIC3-220ENST00000640748 INPP5FQ9Y2H2 1132 aa12.93□□□□□ -0.34
ERGIC3-220ENST00000640748 PCDHB13Q9Y5F0 798 aa12.93□□□□□ -0.34
ERGIC3-220ENST00000640748 GFRA3O60609 400 aa12.92□□□□□ -0.34
ERGIC3-220ENST00000640748 LILRB3O75022 631 aa12.92□□□□□ -0.34
ERGIC3-220ENST00000640748 DDHD2O94830 711 aa12.92□□□□□ -0.34
ERGIC3-220ENST00000640748 SKIP12755 728 aa12.92□□□□□ -0.34
ERGIC3-220ENST00000640748 RPL13P26373 211 aaKnown RBP12.92□□□□□ -0.34
ERGIC3-220ENST00000640748 HOXA11P31270 313 aaPredicted RBP12.92□□□□□ -0.34
ERGIC3-220ENST00000640748 CA8P35219 290 aa12.92□□□□□ -0.34
ERGIC3-220ENST00000640748 PLXNA3P51805 1871 aa12.92□□□□□ -0.34
ERGIC3-220ENST00000640748 NUBP1P53384 320 aa12.92□□□□□ -0.34
ERGIC3-220ENST00000640748 NPEPPSP55786 919 aa12.92□□□□□ -0.34
ERGIC3-220ENST00000640748 ADAM9Q13443 819 aa12.92□□□□□ -0.34
ERGIC3-220ENST00000640748 NOLC1Q14978 699 aaKnown RBP eCLIP12.92□□□□□ -0.34
ERGIC3-220ENST00000640748 VWA3BQ502W6 1294 aa12.92□□□□□ -0.34
ERGIC3-220ENST00000640748 UBXN11Q5T124 520 aa12.92□□□□□ -0.34
ERGIC3-220ENST00000640748 FKBP15Q5T1M5 1219 aa12.92□□□□□ -0.34
ERGIC3-220ENST00000640748 TMC5Q6UXY8 1006 aa12.92□□□□□ -0.34
ERGIC3-220ENST00000640748 CATSPER4Q7RTX7 472 aa12.92□□□□□ -0.34
ERGIC3-220ENST00000640748 ZNF720Q7Z2F6 126 aa12.92□□□□□ -0.34
ERGIC3-220ENST00000640748 MRPL10Q7Z7H8 261 aaKnown RBP12.92□□□□□ -0.34
ERGIC3-220ENST00000640748 DAW1Q8N136 415 aa12.92□□□□□ -0.34
ERGIC3-220ENST00000640748 ATOH1Q92858 354 aaPredicted RBP12.92□□□□□ -0.34
ERGIC3-220ENST00000640748 CEP170P1Q96L14 293 aa12.92□□□□□ -0.34
ERGIC3-220ENST00000640748 NLRP4Q96MN2 994 aa12.92□□□□□ -0.34
ERGIC3-220ENST00000640748 CYP26B1Q9NR63 512 aa12.92□□□□□ -0.34
ERGIC3-220ENST00000640748 AGPAT5Q9NUQ2 364 aa12.92□□□□□ -0.34
ERGIC3-220ENST00000640748 USTQ9Y2C2 406 aa12.92□□□□□ -0.34
ERGIC3-220ENST00000640748 PCDHB2Q9Y5E7 798 aa12.92□□□□□ -0.34
ERGIC3-220ENST00000640748 PROB1E7EW31 1015 aa12.91□□□□□ -0.34
ERGIC3-220ENST00000640748 K7ENM7 598 aa12.91□□□□□ -0.34
ERGIC3-220ENST00000640748 PLS3P13797 630 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms