RNA–Protein interactions for RNA: ENST00000640648.1

NECAP1-227, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 5,166 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-227ENST00000640648 CDCA2Q69YH5 1023 aaPredicted RBP8.7□□□□□ -1.02
NECAP1-227ENST00000640648 TTC30BQ8N4P2 665 aa8.7□□□□□ -1.02
NECAP1-227ENST00000640648 GDAP1Q8TB36 358 aa8.7□□□□□ -1.02
NECAP1-227ENST00000640648 PIGBQ92521 554 aa8.7□□□□□ -1.02
NECAP1-227ENST00000640648 CCT6BQ92526 530 aa8.7□□□□□ -1.02
NECAP1-227ENST00000640648 SPATA17Q96L03 361 aa8.7□□□□□ -1.02
NECAP1-227ENST00000640648 MTA3Q9BTC8 594 aa8.7□□□□□ -1.02
NECAP1-227ENST00000640648 TRIM45Q9H8W5 580 aaPredicted RBP8.7□□□□□ -1.02
NECAP1-227ENST00000640648 VIRMAQ69YN4 1812 aaKnown RBP8.7□□□□□ -1.02
NECAP1-227ENST00000640648 AFF2P51816 1311 aa8.7□□□□□ -1.02
NECAP1-227ENST00000640648 DPPA5A6NC42 116 aa8.7□□□□□ -1.02
NECAP1-227ENST00000640648 TRIM64CA6NLI5 447 aa8.7□□□□□ -1.02
NECAP1-227ENST00000640648 K7ENM7 598 aa8.7□□□□□ -1.02
NECAP1-227ENST00000640648 PTGS2P35354 604 aa8.7□□□□□ -1.02
NECAP1-227ENST00000640648 HSD17B3P37058 310 aa8.7□□□□□ -1.02
NECAP1-227ENST00000640648 ARL1P40616 181 aaPredicted RBP8.7□□□□□ -1.02
NECAP1-227ENST00000640648 UBE2SQ16763 222 aa8.7□□□□□ -1.02
NECAP1-227ENST00000640648 GEN1Q17RS7 908 aa8.7□□□□□ -1.02
NECAP1-227ENST00000640648 BBS9Q3SYG4 887 aa8.7□□□□□ -1.02
NECAP1-227ENST00000640648 ARL6IP4Q66PJ3 421 aaKnown RBP8.7□□□□□ -1.02
NECAP1-227ENST00000640648 CDH24Q86UP0 819 aa8.7□□□□□ -1.02
NECAP1-227ENST00000640648 TRIM50Q86XT4 487 aa8.7□□□□□ -1.02
NECAP1-227ENST00000640648 SCUBE1Q8IWY4 988 aa8.7□□□□□ -1.02
NECAP1-227ENST00000640648 SIX5Q8N196 739 aa8.7□□□□□ -1.02
NECAP1-227ENST00000640648 MXD3Q9BW11 206 aa8.7□□□□□ -1.02
NECAP1-227ENST00000640648 MAGEE1Q9HCI5 957 aa8.7□□□□□ -1.02
NECAP1-227ENST00000640648 MPP6Q9NZW5 540 aa8.7□□□□□ -1.02
NECAP1-227ENST00000640648 MRPL11Q9Y3B7 192 aaKnown RBP8.7□□□□□ -1.02
NECAP1-227ENST00000640648 HECW2Q9P2P5 1572 aa8.7□□□□□ -1.02
NECAP1-227ENST00000640648 C5orf60A6NFR6 353 aa8.69□□□□□ -1.02
NECAP1-227ENST00000640648 SPAG6O75602 509 aa8.69□□□□□ -1.02
NECAP1-227ENST00000640648 DLATP10515 647 aaKnown RBP8.69□□□□□ -1.02
NECAP1-227ENST00000640648 ERFEQ4G0M1 354 aa8.69□□□□□ -1.02
NECAP1-227ENST00000640648 PPP1R15BQ5SWA1 713 aa8.69□□□□□ -1.02
NECAP1-227ENST00000640648 SYCE2Q6PIF2 218 aa8.69□□□□□ -1.02
NECAP1-227ENST00000640648 TAS2R42Q7RTR8 314 aa8.69□□□□□ -1.02
NECAP1-227ENST00000640648 C19orf60Q96EN9 201 aa8.69□□□□□ -1.02
NECAP1-227ENST00000640648 POLD4Q9HCU8 107 aa8.69□□□□□ -1.02
NECAP1-227ENST00000640648 PICK1Q9NRD5 415 aa8.69□□□□□ -1.02
NECAP1-227ENST00000640648 UVRAGQ9P2Y5 699 aa8.69□□□□□ -1.02
NECAP1-227ENST00000640648 BAG5Q9UL15 447 aa8.69□□□□□ -1.02
NECAP1-227ENST00000640648 EXOC7Q9UPT5 735 aa8.69□□□□□ -1.02
NECAP1-227ENST00000640648 NCK2O43639 380 aa8.69□□□□□ -1.02
NECAP1-227ENST00000640648 ATF7P17544 494 aaPredicted RBP8.69□□□□□ -1.02
NECAP1-227ENST00000640648 RFX1P22670 979 aa8.69□□□□□ -1.02
NECAP1-227ENST00000640648 CNGA2Q16280 664 aa8.69□□□□□ -1.02
NECAP1-227ENST00000640648 DOK7Q18PE1 504 aa8.69□□□□□ -1.02
NECAP1-227ENST00000640648 ODR4Q5SWX8 454 aa8.69□□□□□ -1.02
NECAP1-227ENST00000640648 ERMARDQ5T6L9 678 aa8.69□□□□□ -1.02
NECAP1-227ENST00000640648 SUSD4Q5VX71 490 aa8.69□□□□□ -1.02
NECAP1-227ENST00000640648 ATG9AQ7Z3C6 839 aa8.69□□□□□ -1.02
NECAP1-227ENST00000640648 OR9Q1Q8NGQ5 310 aa8.69□□□□□ -1.02
NECAP1-227ENST00000640648 GADD45GIP1Q8TAE8 222 aaPredicted RBP8.69□□□□□ -1.02
NECAP1-227ENST00000640648 SPATA16Q9BXB7 569 aa8.69□□□□□ -1.02
NECAP1-227ENST00000640648 MRPL1Q9BYD6 325 aaKnown RBP8.69□□□□□ -1.02
NECAP1-227ENST00000640648 OSBPL6Q9BZF3 934 aa8.69□□□□□ -1.02
NECAP1-227ENST00000640648 MYRFQ9Y2G1 1151 aa8.69□□□□□ -1.02
NECAP1-227ENST00000640648 ABCB11O95342 1321 aa8.69□□□□□ -1.02
NECAP1-227ENST00000640648 STK36Q9NRP7 1315 aa8.69□□□□□ -1.02
NECAP1-227ENST00000640648 A0A0G2JND7 137 aa8.69□□□□□ -1.02
NECAP1-227ENST00000640648 CFAP69A5D8W1 941 aa8.69□□□□□ -1.02
NECAP1-227ENST00000640648 SORBS3O60504 671 aa8.69□□□□□ -1.02
NECAP1-227ENST00000640648 PSMG1O95456 288 aa8.69□□□□□ -1.02
NECAP1-227ENST00000640648 CTDNEP1O95476 244 aa8.69□□□□□ -1.02
NECAP1-227ENST00000640648 ZBED1O96006 694 aa8.69□□□□□ -1.02
NECAP1-227ENST00000640648 CCNCP24863 283 aa8.69□□□□□ -1.02
NECAP1-227ENST00000640648 NSFP46459 744 aaKnown RBP8.69□□□□□ -1.02
NECAP1-227ENST00000640648 PTDSS1P48651 473 aaKnown RBP8.69□□□□□ -1.02
NECAP1-227ENST00000640648 USP46P62068 366 aa8.69□□□□□ -1.02
NECAP1-227ENST00000640648 MECOMQ03112 1051 aa8.69□□□□□ -1.02
NECAP1-227ENST00000640648 RSBN1Q5VWQ0 802 aaPredicted RBP8.69□□□□□ -1.02
NECAP1-227ENST00000640648 NFRKBQ6P4R8 1299 aa8.69□□□□□ -1.02
NECAP1-227ENST00000640648 KRT26Q7Z3Y9 468 aa8.69□□□□□ -1.02
NECAP1-227ENST00000640648 CCDC103Q8IW40 242 aa8.69□□□□□ -1.02
NECAP1-227ENST00000640648 KAT2BQ92831 832 aa8.69□□□□□ -1.02
NECAP1-227ENST00000640648 CHP1Q99653 195 aa8.69□□□□□ -1.02
NECAP1-227ENST00000640648 GDF3Q9NR23 364 aa8.69□□□□□ -1.02
NECAP1-227ENST00000640648 SLC5A4Q9NY91 659 aa8.69□□□□□ -1.02
NECAP1-227ENST00000640648 GNPTGQ9UJJ9 305 aa8.69□□□□□ -1.02
NECAP1-227ENST00000640648 ALKQ9UM73 1620 aa8.69□□□□□ -1.02
NECAP1-227ENST00000640648 MROH7Q68CQ1 1323 aa8.69□□□□□ -1.02
NECAP1-227ENST00000640648 USP42Q9H9J4 1324 aaKnown RBP8.69□□□□□ -1.02
NECAP1-227ENST00000640648 BTBD19C9JJ37 291 aa8.69□□□□□ -1.02
NECAP1-227ENST00000640648 FDPSP14324 419 aaKnown RBP8.69□□□□□ -1.02
NECAP1-227ENST00000640648 SULT2A1Q06520 285 aa8.69□□□□□ -1.02
NECAP1-227ENST00000640648 SLC15A2Q16348 729 aa8.69□□□□□ -1.02
NECAP1-227ENST00000640648 LRRC6Q86X45 466 aa8.69□□□□□ -1.02
NECAP1-227ENST00000640648 ZNF354CQ86Y25 554 aa8.69□□□□□ -1.02
NECAP1-227ENST00000640648 ALLCQ8N6M5 410 aa8.69□□□□□ -1.02
NECAP1-227ENST00000640648 AFG1LQ8WV93 481 aa8.69□□□□□ -1.02
NECAP1-227ENST00000640648 RIN2Q8WYP3 895 aaPredicted RBP8.69□□□□□ -1.02
NECAP1-227ENST00000640648 SLC10A4Q96EP9 437 aa8.69□□□□□ -1.02
NECAP1-227ENST00000640648 TEX13BQ9BXU2 312 aa8.69□□□□□ -1.02
NECAP1-227ENST00000640648 LRMDAQ9H2I8 198 aa8.69□□□□□ -1.02
NECAP1-227ENST00000640648 CCDC59Q9P031 241 aaKnown RBP8.69□□□□□ -1.02
NECAP1-227ENST00000640648 SUN2Q9UH99 717 aa8.69□□□□□ -1.02
NECAP1-227ENST00000640648 LRRC42Q9Y546 428 aa8.69□□□□□ -1.02
NECAP1-227ENST00000640648 ESYT2A0FGR8 921 aa8.68□□□□□ -1.02
NECAP1-227ENST00000640648 MAGEB16A2A368 324 aa8.68□□□□□ -1.02
NECAP1-227ENST00000640648 IFNA16P05015 189 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms