RNA–Protein interactions for RNA: ENST00000640414.1

MECP2-226, Transcript of methyl-CpG binding protein 2, humanhuman

TSL 5 BASIC

Gene MECP2, Length 897 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-226ENST00000640414 TEKT3Q9BXF9 490 aa12.73□□□□□ -0.37
MECP2-226ENST00000640414 SMOC1Q9H4F8 434 aa12.73□□□□□ -0.37
MECP2-226ENST00000640414 ZNF334Q9HCZ1 680 aaPredicted RBP12.73□□□□□ -0.37
MECP2-226ENST00000640414 RBM12Q9NTZ6 932 aaKnown RBP12.73□□□□□ -0.37
MECP2-226ENST00000640414 C2orf42Q9NWW7 574 aa12.73□□□□□ -0.37
MECP2-226ENST00000640414 ATP6V1DQ9Y5K8 247 aa12.73□□□□□ -0.37
MECP2-226ENST00000640414 TSPAN1O60635 241 aa12.72□□□□□ -0.37
MECP2-226ENST00000640414 EPN2O95208 641 aa12.72□□□□□ -0.37
MECP2-226ENST00000640414 CCNE1P24864 410 aa12.72□□□□□ -0.37
MECP2-226ENST00000640414 GDI1P31150 447 aa12.72□□□□□ -0.37
MECP2-226ENST00000640414 ZNF252P-AS1Q0IIN9 211 aa12.72□□□□□ -0.37
MECP2-226ENST00000640414 GRIK3Q13003 919 aa12.72□□□□□ -0.37
MECP2-226ENST00000640414 PTGDRQ13258 359 aa12.72□□□□□ -0.37
MECP2-226ENST00000640414 RAB33AQ14088 237 aa12.72□□□□□ -0.37
MECP2-226ENST00000640414 FAM78AQ5JUQ0 283 aa12.72□□□□□ -0.37
MECP2-226ENST00000640414 Q6ZS52 159 aa12.72□□□□□ -0.37
MECP2-226ENST00000640414 RDM1Q8NG50 284 aa12.72□□□□□ -0.37
MECP2-226ENST00000640414 CPB2Q96IY4 423 aa12.72□□□□□ -0.37
MECP2-226ENST00000640414 LOXL4Q96JB6 756 aa12.72□□□□□ -0.37
MECP2-226ENST00000640414 JPH2Q9BR39 696 aaPredicted RBP12.72□□□□□ -0.37
MECP2-226ENST00000640414 NXF3Q9H4D5 531 aaKnown RBP12.72□□□□□ -0.37
MECP2-226ENST00000640414 TRPV5Q9NQA5 729 aa12.72□□□□□ -0.37
MECP2-226ENST00000640414 GIT1Q9Y2X7 761 aa12.72□□□□□ -0.37
MECP2-226ENST00000640414 CCDC194A0A1B0GVG4 234 aa12.71□□□□□ -0.37
MECP2-226ENST00000640414 TAF4O00268 1085 aa12.71□□□□□ -0.37
MECP2-226ENST00000640414 PSMD10O75832 226 aa12.71□□□□□ -0.37
MECP2-226ENST00000640414 ERLIN2O94905 339 aa12.71□□□□□ -0.37
MECP2-226ENST00000640414 ATP2B1P20020 1258 aa12.71□□□□□ -0.37
MECP2-226ENST00000640414 AKAP5P24588 427 aa12.71□□□□□ -0.37
MECP2-226ENST00000640414 OR1D2P34982 312 aa12.71□□□□□ -0.37
MECP2-226ENST00000640414 RAP1GAPP47736 663 aa12.71□□□□□ -0.37
MECP2-226ENST00000640414 NPEPPSP55786 919 aa12.71□□□□□ -0.37
MECP2-226ENST00000640414 LAMTOR4Q0VGL1 99 aa12.71□□□□□ -0.37
MECP2-226ENST00000640414 WDR44Q5JSH3 913 aa12.71□□□□□ -0.37
MECP2-226ENST00000640414 PLA2G2CQ5R387 149 aa12.71□□□□□ -0.37
MECP2-226ENST00000640414 RNF43Q68DV7 783 aa12.71□□□□□ -0.37
MECP2-226ENST00000640414 NOTUMQ6P988 496 aa12.71□□□□□ -0.37
MECP2-226ENST00000640414 KRT25Q7Z3Z0 450 aa12.71□□□□□ -0.37
MECP2-226ENST00000640414 WDR5BQ86VZ2 330 aa12.71□□□□□ -0.37
MECP2-226ENST00000640414 ZNF579Q8NAF0 562 aaKnown RBP12.71□□□□□ -0.37
MECP2-226ENST00000640414 ZCCHC14Q8WYQ9 949 aaKnown RBP12.71□□□□□ -0.37
MECP2-226ENST00000640414 TMEM143Q96AN5 459 aa12.71□□□□□ -0.37
MECP2-226ENST00000640414 USP28Q96RU2 1077 aa12.71□□□□□ -0.37
MECP2-226ENST00000640414 CSRNP2Q9H175 543 aa12.71□□□□□ -0.37
MECP2-226ENST00000640414 ZFP14Q9HCL3 533 aa12.71□□□□□ -0.37
MECP2-226ENST00000640414 AVENQ9NQS1 362 aaPredicted RBP12.71□□□□□ -0.37
MECP2-226ENST00000640414 VWA8A3KMH1 1905 aa12.7□□□□□ -0.38
MECP2-226ENST00000640414 SETXQ7Z333 2677 aaKnown RBP12.7□□□□□ -0.38
MECP2-226ENST00000640414 WNT7AO00755 349 aa12.7□□□□□ -0.38
MECP2-226ENST00000640414 KIF4AO95239 1232 aa12.7□□□□□ -0.38
MECP2-226ENST00000640414 PSMC3P17980 439 aa12.7□□□□□ -0.38
MECP2-226ENST00000640414 LRRC32Q14392 662 aa12.7□□□□□ -0.38
MECP2-226ENST00000640414 INF2Q27J81 1249 aa12.7□□□□□ -0.38
MECP2-226ENST00000640414 PRSS36Q5K4E3 855 aa12.7□□□□□ -0.38
MECP2-226ENST00000640414 TCEAL6Q6IPX3 200 aa12.7□□□□□ -0.38
MECP2-226ENST00000640414 B3GNT9Q6UX72 402 aa12.7□□□□□ -0.38
MECP2-226ENST00000640414 VITQ6UXI7 678 aa12.7□□□□□ -0.38
MECP2-226ENST00000640414 KBTBD6Q86V97 674 aa12.7□□□□□ -0.38
MECP2-226ENST00000640414 RNF149Q8NC42 400 aa12.7□□□□□ -0.38
MECP2-226ENST00000640414 PSPC1Q8WXF1 523 aaKnown RBP12.7□□□□□ -0.38
MECP2-226ENST00000640414 SLC7A3Q8WY07 619 aa12.7□□□□□ -0.38
MECP2-226ENST00000640414 TCEAL3Q969E4 200 aa12.7□□□□□ -0.38
MECP2-226ENST00000640414 TCEAL4Q96EI5 215 aa12.7□□□□□ -0.38
MECP2-226ENST00000640414 CCDC51Q96ER9 411 aa12.7□□□□□ -0.38
MECP2-226ENST00000640414 ZNF396Q96N95 335 aaPredicted RBP12.7□□□□□ -0.38
MECP2-226ENST00000640414 ASB16Q96NS5 453 aa12.7□□□□□ -0.38
MECP2-226ENST00000640414 SCNM1Q9BWG6 230 aa12.7□□□□□ -0.38
MECP2-226ENST00000640414 BMP2KQ9NSY1 1161 aaPredicted RBP12.7□□□□□ -0.38
MECP2-226ENST00000640414 KLK14Q9P0G3 267 aa12.7□□□□□ -0.38
MECP2-226ENST00000640414 CLIC4Q9Y696 253 aa12.7□□□□□ -0.38
MECP2-226ENST00000640414 PDCD11Q14690 1871 aaKnown RBP12.7□□□□□ -0.38
MECP2-226ENST00000640414 CASTOR2A6NHX0 329 aa12.69□□□□□ -0.38
MECP2-226ENST00000640414 ARNTLO00327 626 aa12.69□□□□□ -0.38
MECP2-226ENST00000640414 ZIC2O95409 532 aaPredicted RBP12.69□□□□□ -0.38
MECP2-226ENST00000640414 PTPN2P17706 415 aa12.69□□□□□ -0.38
MECP2-226ENST00000640414 AXLP30530 894 aa12.69□□□□□ -0.38
MECP2-226ENST00000640414 HOXA6P31267 233 aa12.69□□□□□ -0.38
MECP2-226ENST00000640414 MPLP40238 635 aa12.69□□□□□ -0.38
MECP2-226ENST00000640414 VIPR2P41587 438 aa12.69□□□□□ -0.38
MECP2-226ENST00000640414 TRAPPC10P48553 1259 aa12.69□□□□□ -0.38
MECP2-226ENST00000640414 CEBPZQ03701 1054 aaKnown RBP12.69□□□□□ -0.38
MECP2-226ENST00000640414 TUSC3Q13454 348 aa12.69□□□□□ -0.38
MECP2-226ENST00000640414 NBR1Q14596 966 aa12.69□□□□□ -0.38
MECP2-226ENST00000640414 ZNF174Q15697 407 aa12.69□□□□□ -0.38
MECP2-226ENST00000640414 RILPL1Q5EBL4 403 aa12.69□□□□□ -0.38
MECP2-226ENST00000640414 ATL3Q6DD88 541 aa12.69□□□□□ -0.38
MECP2-226ENST00000640414 PDXDC1Q6P996 788 aa12.69□□□□□ -0.38
MECP2-226ENST00000640414 RTL10Q7L3V2 364 aa12.69□□□□□ -0.38
MECP2-226ENST00000640414 CACNA2D4Q7Z3S7 1137 aa12.69□□□□□ -0.38
MECP2-226ENST00000640414 HACE1Q8IYU2 909 aa12.69□□□□□ -0.38
MECP2-226ENST00000640414 TBCKQ8TEA7 893 aa12.69□□□□□ -0.38
MECP2-226ENST00000640414 GAB3Q8WWW8 586 aa12.69□□□□□ -0.38
MECP2-226ENST00000640414 TRIM6Q9C030 488 aaPredicted RBP12.69□□□□□ -0.38
MECP2-226ENST00000640414 DHX33Q9H6R0 707 aaKnown RBP12.69□□□□□ -0.38
MECP2-226ENST00000640414 GDPD2Q9HCC8 539 aa12.69□□□□□ -0.38
MECP2-226ENST00000640414 RCOR1Q9UKL0 485 aa12.69□□□□□ -0.38
MECP2-226ENST00000640414 CFAP45Q9UL16 551 aa12.69□□□□□ -0.38
MECP2-226ENST00000640414 PCDHB6Q9Y5E3 794 aa12.69□□□□□ -0.38
MECP2-226ENST00000640414 NCANO14594 1321 aa12.68□□□□□ -0.38
MECP2-226ENST00000640414 SDK1Q7Z5N4 2213 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms