RNA–Protein interactions for RNA: ENST00000638141.1

CAPN3-221, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 2,358 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-221ENST00000638141 ARHGAP10A1A4S6 786 aa12.73□□□□□ -0.37
CAPN3-221ENST00000638141 ADAMTS3O15072 1205 aa12.73□□□□□ -0.37
CAPN3-221ENST00000638141 TP73O15350 636 aa12.73□□□□□ -0.37
CAPN3-221ENST00000638141 ACSL3O95573 720 aa12.73□□□□□ -0.37
CAPN3-221ENST00000638141 SMIM18P0DKX4 95 aa12.73□□□□□ -0.37
CAPN3-221ENST00000638141 PLCG2P16885 1265 aa12.73□□□□□ -0.37
CAPN3-221ENST00000638141 GALK1P51570 392 aa12.73□□□□□ -0.37
CAPN3-221ENST00000638141 CHN2P52757 468 aa12.73□□□□□ -0.37
CAPN3-221ENST00000638141 ACTR3P61158 418 aa12.73□□□□□ -0.37
CAPN3-221ENST00000638141 PTPROQ16827 1216 aa12.73□□□□□ -0.37
CAPN3-221ENST00000638141 TMEM266Q2M3C6 531 aa12.73□□□□□ -0.37
CAPN3-221ENST00000638141 TMEM119Q4V9L6 283 aa12.73□□□□□ -0.37
CAPN3-221ENST00000638141 EAPPQ56P03 285 aaPredicted RBP12.73□□□□□ -0.37
CAPN3-221ENST00000638141 SYCP2LQ5T4T6 812 aa12.73□□□□□ -0.37
CAPN3-221ENST00000638141 C6orf163Q5TEZ5 329 aa12.73□□□□□ -0.37
CAPN3-221ENST00000638141 TCERG1LQ5VWI1 586 aa12.73□□□□□ -0.37
CAPN3-221ENST00000638141 C11orf63Q6NUN7 778 aa12.73□□□□□ -0.37
CAPN3-221ENST00000638141 SYDE1Q6ZW31 735 aaPredicted RBP12.73□□□□□ -0.37
CAPN3-221ENST00000638141 SFR1Q86XK3 245 aa12.73□□□□□ -0.37
CAPN3-221ENST00000638141 TDRPQ86YL5 185 aa12.73□□□□□ -0.37
CAPN3-221ENST00000638141 CYP4X1Q8N118 509 aa12.73□□□□□ -0.37
CAPN3-221ENST00000638141 VPS50Q96JG6 964 aa12.73□□□□□ -0.37
CAPN3-221ENST00000638141 BTBD9Q96Q07 612 aa12.73□□□□□ -0.37
CAPN3-221ENST00000638141 GREM2Q9H772 168 aa12.73□□□□□ -0.37
CAPN3-221ENST00000638141 TYW1Q9NV66 732 aaKnown RBP12.73□□□□□ -0.37
CAPN3-221ENST00000638141 ARL8BQ9NVJ2 186 aa12.73□□□□□ -0.37
CAPN3-221ENST00000638141 ARHGEF38Q9NXL2 777 aa12.73□□□□□ -0.37
CAPN3-221ENST00000638141 THEGQ9P2T0 379 aa12.73□□□□□ -0.37
CAPN3-221ENST00000638141 ROBO3Q96MS0 1386 aa12.73□□□□□ -0.37
CAPN3-221ENST00000638141 A0A1B0GUL6 1792 aa12.73□□□□□ -0.37
CAPN3-221ENST00000638141 SH3PXD2BA1X283 911 aa12.73□□□□□ -0.37
CAPN3-221ENST00000638141 GTPBP10A4D1E9 387 aaKnown RBP12.73□□□□□ -0.37
CAPN3-221ENST00000638141 MATN2O00339 956 aa12.73□□□□□ -0.37
CAPN3-221ENST00000638141 CSDE1O75534 798 aaKnown RBP12.73□□□□□ -0.37
CAPN3-221ENST00000638141 SERPINB7O75635 380 aa12.73□□□□□ -0.37
CAPN3-221ENST00000638141 COPB2P35606 906 aa12.73□□□□□ -0.37
CAPN3-221ENST00000638141 VPS41P49754 854 aa12.73□□□□□ -0.37
CAPN3-221ENST00000638141 GRM4Q14833 912 aa12.73□□□□□ -0.37
CAPN3-221ENST00000638141 EXOC3L4Q17RC7 722 aa12.73□□□□□ -0.37
CAPN3-221ENST00000638141 FAM26FQ5R3K3 315 aa12.73□□□□□ -0.37
CAPN3-221ENST00000638141 KLHL35Q6PF15 583 aa12.73□□□□□ -0.37
CAPN3-221ENST00000638141 DHRS4L2Q6PKH6 230 aa12.73□□□□□ -0.37
CAPN3-221ENST00000638141 OTOAQ7RTW8 1153 aa12.73□□□□□ -0.37
CAPN3-221ENST00000638141 NEK8Q86SG6 692 aa12.73□□□□□ -0.37
CAPN3-221ENST00000638141 TRABD2AQ86V40 505 aa12.73□□□□□ -0.37
CAPN3-221ENST00000638141 UBL4BQ8N7F7 174 aa12.73□□□□□ -0.37
CAPN3-221ENST00000638141 DEPTORQ8TB45 409 aa12.73□□□□□ -0.37
CAPN3-221ENST00000638141 SLC35G2Q8TBE7 412 aa12.73□□□□□ -0.37
CAPN3-221ENST00000638141 PLEKHO2Q8TD55 490 aa12.73□□□□□ -0.37
CAPN3-221ENST00000638141 PNMA5Q96PV4 448 aa12.73□□□□□ -0.37
CAPN3-221ENST00000638141 MXD3Q9BW11 206 aa12.73□□□□□ -0.37
CAPN3-221ENST00000638141 EIF2AQ9BY44 585 aaKnown RBP12.73□□□□□ -0.37
CAPN3-221ENST00000638141 EBF3Q9H4W6 596 aa12.73□□□□□ -0.37
CAPN3-221ENST00000638141 SLCO1B3Q9NPD5 702 aa12.73□□□□□ -0.37
CAPN3-221ENST00000638141 PFDN4Q9NQP4 134 aa12.73□□□□□ -0.37
CAPN3-221ENST00000638141 ANKFY1Q9P2R3 1169 aa12.73□□□□□ -0.37
CAPN3-221ENST00000638141 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.73□□□□□ -0.37
CAPN3-221ENST00000638141 KLHDC10Q6PID8 442 aa12.72□□□□□ -0.37
CAPN3-221ENST00000638141 UGT2A3Q6UWM9 527 aa12.72□□□□□ -0.37
CAPN3-221ENST00000638141 KIF6Q6ZMV9 814 aa12.72□□□□□ -0.37
CAPN3-221ENST00000638141 PTF1AQ7RTS3 328 aa12.72□□□□□ -0.37
CAPN3-221ENST00000638141 SCYL3Q8IZE3 742 aa12.72□□□□□ -0.37
CAPN3-221ENST00000638141 ALG3Q92685 438 aa12.72□□□□□ -0.37
CAPN3-221ENST00000638141 DDX12PQ92771 950 aa12.72□□□□□ -0.37
CAPN3-221ENST00000638141 SKA1Q96BD8 255 aa12.72□□□□□ -0.37
CAPN3-221ENST00000638141 SNX27Q96L92 541 aa12.72□□□□□ -0.37
CAPN3-221ENST00000638141 OSBPL8Q9BZF1 889 aa12.72□□□□□ -0.37
CAPN3-221ENST00000638141 SSU72Q9NP77 194 aaKnown RBP12.72□□□□□ -0.37
CAPN3-221ENST00000638141 CROTQ9UKG9 612 aa12.72□□□□□ -0.37
CAPN3-221ENST00000638141 MTUS1Q9ULD2 1270 aa12.72□□□□□ -0.37
CAPN3-221ENST00000638141 RASA4BC9J798 803 aa12.72□□□□□ -0.37
CAPN3-221ENST00000638141 RASA4O43374 803 aa12.72□□□□□ -0.37
CAPN3-221ENST00000638141 KCNQ2O43526 872 aa12.72□□□□□ -0.37
CAPN3-221ENST00000638141 PDE5AO76074 875 aa12.72□□□□□ -0.37
CAPN3-221ENST00000638141 OR6B1O95007 311 aa12.72□□□□□ -0.37
CAPN3-221ENST00000638141 FUT4P22083 530 aa12.72□□□□□ -0.37
CAPN3-221ENST00000638141 CYP7A1P22680 504 aa12.72□□□□□ -0.37
CAPN3-221ENST00000638141 HDAC4P56524 1084 aa12.72□□□□□ -0.37
CAPN3-221ENST00000638141 KCNH2Q12809 1159 aa12.72□□□□□ -0.37
CAPN3-221ENST00000638141 COASYQ13057 564 aa12.72□□□□□ -0.37
CAPN3-221ENST00000638141 NKX1-1Q15270 411 aaPredicted RBP12.72□□□□□ -0.37
CAPN3-221ENST00000638141 RASA2Q15283 850 aa12.72□□□□□ -0.37
CAPN3-221ENST00000638141 ANKRD20A4Q4UJ75 823 aa12.72□□□□□ -0.37
CAPN3-221ENST00000638141 TRIM67Q6ZTA4 783 aa12.72□□□□□ -0.37
CAPN3-221ENST00000638141 PATL1Q86TB9 770 aaKnown RBP12.72□□□□□ -0.37
CAPN3-221ENST00000638141 LRRC6Q86X45 466 aa12.72□□□□□ -0.37
CAPN3-221ENST00000638141 RHOT2Q8IXI1 618 aa12.72□□□□□ -0.37
CAPN3-221ENST00000638141 OLIG1Q8TAK6 271 aa12.72□□□□□ -0.37
CAPN3-221ENST00000638141 SNRNP27Q8WVK2 155 aaKnown RBP12.72□□□□□ -0.37
CAPN3-221ENST00000638141 DNAJC1Q96KC8 554 aaKnown RBP12.72□□□□□ -0.37
CAPN3-221ENST00000638141 LRRC19Q9H756 370 aa12.72□□□□□ -0.37
CAPN3-221ENST00000638141 ERVV-2B6SEH9 535 aa12.71□□□□□ -0.37
CAPN3-221ENST00000638141 ANKRD63C9JTQ0 380 aa12.71□□□□□ -0.37
CAPN3-221ENST00000638141 AMPD1P23109 780 aa12.71□□□□□ -0.37
CAPN3-221ENST00000638141 PGM1P36871 562 aa12.71□□□□□ -0.37
CAPN3-221ENST00000638141 CCDC62Q6P9F0 684 aa12.71□□□□□ -0.37
CAPN3-221ENST00000638141 KYAT3Q6YP21 454 aaKnown RBP12.71□□□□□ -0.37
CAPN3-221ENST00000638141 RBM44Q6ZP01 1051 aaKnown RBP12.71□□□□□ -0.37
CAPN3-221ENST00000638141 FAM196AQ6ZSG2 479 aa12.71□□□□□ -0.37
CAPN3-221ENST00000638141 CCDC25Q86WR0 208 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms