RNA–Protein interactions for RNA: ENST00000638076.1

CLN6-224, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best)

Gene CLN6, Length 2,323 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-224ENST00000638076 NSFP46459 744 aaKnown RBP23■■□□□ 1.27
CLN6-224ENST00000638076 DHX34Q14147 1143 aaKnown RBP23■■□□□ 1.27
CLN6-224ENST00000638076 MXD4Q14582 209 aaPredicted RBP23■■□□□ 1.27
CLN6-224ENST00000638076 PLCB4Q15147 1175 aa23■■□□□ 1.27
CLN6-224ENST00000638076 SCARA3Q6AZY7 606 aa23■■□□□ 1.27
CLN6-224ENST00000638076 ZDHHC14Q8IZN3 488 aa23■■□□□ 1.27
CLN6-224ENST00000638076 FAM189A1O60320 539 aa22.99■■□□□ 1.27
CLN6-224ENST00000638076 RRM1P23921 792 aa22.99■■□□□ 1.27
CLN6-224ENST00000638076 RWDD2BP57060 319 aa22.99■■□□□ 1.27
CLN6-224ENST00000638076 CENPCQ03188 943 aa22.99■■□□□ 1.27
CLN6-224ENST00000638076 C2CD6Q53TS8 623 aa22.99■■□□□ 1.27
CLN6-224ENST00000638076 GPAT2Q6NUI2 795 aa22.99■■□□□ 1.27
CLN6-224ENST00000638076 PHLDB2Q86SQ0 1253 aa22.99■■□□□ 1.27
CLN6-224ENST00000638076 ZBTB8OSQ8IWT0 167 aa22.99■■□□□ 1.27
CLN6-224ENST00000638076 ACO2Q99798 780 aaKnown RBP22.99■■□□□ 1.27
CLN6-224ENST00000638076 ERP44Q9BS26 406 aa22.99■■□□□ 1.27
CLN6-224ENST00000638076 IGKV6-21A0A0C4DH24 114 aa22.99■■□□□ 1.27
CLN6-224ENST00000638076 FAM187AA6NFU0 413 aa22.99■■□□□ 1.27
CLN6-224ENST00000638076 GAS2O43903 313 aaKnown RBP22.99■■□□□ 1.27
CLN6-224ENST00000638076 PRKCBP05771 671 aa22.99■■□□□ 1.27
CLN6-224ENST00000638076 CFHP08603 1231 aa22.99■■□□□ 1.27
CLN6-224ENST00000638076 TBXAS1P24557 533 aaPredicted RBP22.99■■□□□ 1.27
CLN6-224ENST00000638076 UAP1Q16222 522 aaPredicted RBP22.99■■□□□ 1.27
CLN6-224ENST00000638076 TMEM63BQ5T3F8 832 aa22.99■■□□□ 1.27
CLN6-224ENST00000638076 KCTD16Q68DU8 428 aa22.99■■□□□ 1.27
CLN6-224ENST00000638076 DUPD1Q68J44 220 aa22.99■■□□□ 1.27
CLN6-224ENST00000638076 CCDC62Q6P9F0 684 aa22.99■■□□□ 1.27
CLN6-224ENST00000638076 USP50Q70EL3 339 aaPredicted RBP22.99■■□□□ 1.27
CLN6-224ENST00000638076 JAMLQ86YT9 394 aa22.99■■□□□ 1.27
CLN6-224ENST00000638076 UPF1Q92900 1129 aaKnown RBP eCLIP22.99■■□□□ 1.271e-7■■■■■ 31.9
CLN6-224ENST00000638076 MAGOHBQ96A72 148 aaKnown RBP22.99■■□□□ 1.27
CLN6-224ENST00000638076 AVENQ9NQS1 362 aaPredicted RBP22.99■■□□□ 1.27
CLN6-224ENST00000638076 SLTMQ9NWH9 1034 aaKnown RBP eCLIP22.99■■□□□ 1.27
CLN6-224ENST00000638076 MYBL1P10243 752 aa22.98■■□□□ 1.27
CLN6-224ENST00000638076 GNA15P30679 374 aa22.98■■□□□ 1.27
CLN6-224ENST00000638076 CHRNA3P32297 505 aa22.98■■□□□ 1.27
CLN6-224ENST00000638076 MAPK6Q16659 721 aa22.98■■□□□ 1.27
CLN6-224ENST00000638076 RHPN2Q8IUC4 686 aa22.98■■□□□ 1.27
CLN6-224ENST00000638076 TRAPPC12Q8WVT3 735 aa22.98■■□□□ 1.27
CLN6-224ENST00000638076 TRIM11Q96F44 468 aa22.98■■□□□ 1.27
CLN6-224ENST00000638076 TRIM7Q9C029 511 aa22.98■■□□□ 1.27
CLN6-224ENST00000638076 CALCOCO1Q9P1Z2 691 aa22.98■■□□□ 1.27
CLN6-224ENST00000638076 MROH7Q68CQ1 1323 aa22.98■■□□□ 1.27
CLN6-224ENST00000638076 TCRBV7S2A1N4TA0A589 114 aa22.98■■□□□ 1.27
CLN6-224ENST00000638076 LLGL2Q6P1M3 1020 aa22.98■■□□□ 1.27
CLN6-224ENST00000638076 SLC13A5Q86YT5 568 aaPredicted RBP22.98■■□□□ 1.27
CLN6-224ENST00000638076 PASD1Q8IV76 773 aa22.98■■□□□ 1.27
CLN6-224ENST00000638076 EXOC8Q8IYI6 725 aa22.98■■□□□ 1.27
CLN6-224ENST00000638076 SH2D3CQ8N5H7 860 aa22.98■■□□□ 1.27
CLN6-224ENST00000638076 RBBP8NLQ8NC74 664 aaPredicted RBP22.98■■□□□ 1.27
CLN6-224ENST00000638076 MROH8Q9H579 483 aa22.98■■□□□ 1.27
CLN6-224ENST00000638076 CST3P01034 146 aaPredicted RBP22.97■■□□□ 1.27
CLN6-224ENST00000638076 TXNP10599 105 aaKnown RBP22.97■■□□□ 1.27
CLN6-224ENST00000638076 YBX3P16989 372 aaKnown RBP eCLIP22.97■■□□□ 1.271e-7■■□□□ 13.8
CLN6-224ENST00000638076 SSTR3P32745 418 aaPredicted RBP22.97■■□□□ 1.27
CLN6-224ENST00000638076 CEP85LQ5SZL2 805 aa22.97■■□□□ 1.27
CLN6-224ENST00000638076 MON1BQ7L1V2 547 aa22.97■■□□□ 1.27
CLN6-224ENST00000638076 WDR49Q8IV35 697 aa22.97■■□□□ 1.27
CLN6-224ENST00000638076 ABRAQ8N0Z2 381 aa22.97■■□□□ 1.27
CLN6-224ENST00000638076 FAM212AQ96EL1 285 aa22.97■■□□□ 1.27
CLN6-224ENST00000638076 IMPG2Q9BZV3 1241 aa22.97■■□□□ 1.27
CLN6-224ENST00000638076 PDGFCQ9NRA1 345 aa22.97■■□□□ 1.27
CLN6-224ENST00000638076 RASAL2Q9UJF2 1139 aa22.97■■□□□ 1.27
CLN6-224ENST00000638076 EPHX2P34913 555 aa22.97■■□□□ 1.27
CLN6-224ENST00000638076 PTGIRP43119 386 aa22.97■■□□□ 1.27
CLN6-224ENST00000638076 DNAJC21Q5F1R6 531 aaKnown RBP22.97■■□□□ 1.27
CLN6-224ENST00000638076 TTC27Q6P3X3 843 aa22.97■■□□□ 1.27
CLN6-224ENST00000638076 TMC3Q7Z5M5 1100 aa22.97■■□□□ 1.27
CLN6-224ENST00000638076 UBLCP1Q8WVY7 318 aaPredicted RBP22.97■■□□□ 1.27
CLN6-224ENST00000638076 ZNF668Q96K58 619 aaPredicted RBP22.97■■□□□ 1.27
CLN6-224ENST00000638076 MTMR12Q9C0I1 747 aa22.97■■□□□ 1.27
CLN6-224ENST00000638076 PCYOX1Q9UHG3 505 aa22.97■■□□□ 1.27
CLN6-224ENST00000638076 CNTN6Q9UQ52 1028 aa22.97■■□□□ 1.27
CLN6-224ENST00000638076 OGTO15294 1046 aa22.96■■□□□ 1.27
CLN6-224ENST00000638076 SHOX2O60902 331 aaPredicted RBP22.96■■□□□ 1.27
CLN6-224ENST00000638076 RPS6KA5O75582 802 aa22.96■■□□□ 1.27
CLN6-224ENST00000638076 GJB1P08034 283 aa22.96■■□□□ 1.27
CLN6-224ENST00000638076 AP3M2P53677 418 aa22.96■■□□□ 1.27
CLN6-224ENST00000638076 DPY19L2Q6NUT2 758 aa22.96■■□□□ 1.27
CLN6-224ENST00000638076 CCDC137Q6PK04 289 aaKnown RBP22.96■■□□□ 1.27
CLN6-224ENST00000638076 LRIG3Q6UXM1 1119 aa22.96■■□□□ 1.27
CLN6-224ENST00000638076 ZC3H15Q8WU90 426 aaKnown RBP22.96■■□□□ 1.27
CLN6-224ENST00000638076 FMO2Q99518 471 aa22.96■■□□□ 1.27
CLN6-224ENST00000638076 C2orf40Q9H1Z8 148 aa22.96■■□□□ 1.27
CLN6-224ENST00000638076 MTUS1Q9ULD2 1270 aa22.96■■□□□ 1.27
CLN6-224ENST00000638076 ABLIM1O14639 778 aa22.96■■□□□ 1.27
CLN6-224ENST00000638076 NOMO3P69849 1222 aa22.96■■□□□ 1.27
CLN6-224ENST00000638076 MCL1Q07820 350 aa22.96■■□□□ 1.27
CLN6-224ENST00000638076 GRM1Q13255 1194 aa22.96■■□□□ 1.27
CLN6-224ENST00000638076 LRRC31Q6UY01 552 aa22.96■■□□□ 1.27
CLN6-224ENST00000638076 TRIM72Q6ZMU5 477 aa22.96■■□□□ 1.27
CLN6-224ENST00000638076 ARMC9Q7Z3E5 817 aa22.96■■□□□ 1.27
CLN6-224ENST00000638076 SMARCAD1Q9H4L7 1026 aa22.96■■□□□ 1.27
CLN6-224ENST00000638076 H0YGN5 161 aa22.95■■□□□ 1.26
CLN6-224ENST00000638076 MYO1FO00160 1098 aa22.95■■□□□ 1.26
CLN6-224ENST00000638076 THAP12O43422 761 aa22.95■■□□□ 1.26
CLN6-224ENST00000638076 GJA5P36382 358 aa22.95■■□□□ 1.26
CLN6-224ENST00000638076 DHX9Q08211 1270 aaKnown RBP22.95■■□□□ 1.26
CLN6-224ENST00000638076 MTMR3Q13615 1198 aa22.95■■□□□ 1.26
CLN6-224ENST00000638076 OR2W6PQ8NHA6 318 aa22.95■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms