RNA–Protein interactions for RNA: ENST00000638009.1

CACNA1A-257, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1A, Length 8,665 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-257ENST00000638009 AFG1LQ8WV93 481 aa20.26■□□□□ 0.83
CACNA1A-257ENST00000638009 CLMNQ96JQ2 1002 aa20.26■□□□□ 0.83
CACNA1A-257ENST00000638009 TRIP11Q15643 1979 aa20.26■□□□□ 0.83
CACNA1A-257ENST00000638009 IFNA14P01570 189 aa20.26■□□□□ 0.83
CACNA1A-257ENST00000638009 LGALS3BPQ08380 585 aa20.26■□□□□ 0.83
CACNA1A-257ENST00000638009 MYL10Q9BUA6 226 aa20.26■□□□□ 0.83
CACNA1A-257ENST00000638009 ARHGEF12Q9NZN5 1544 aa20.26■□□□□ 0.83
CACNA1A-257ENST00000638009 ZNF24P17028 368 aa20.26■□□□□ 0.83
CACNA1A-257ENST00000638009 TIMM10P62072 90 aa20.26■□□□□ 0.83
CACNA1A-257ENST00000638009 GCKRQ14397 625 aa20.26■□□□□ 0.83
CACNA1A-257ENST00000638009 ANKS6Q68DC2 871 aa20.26■□□□□ 0.83
CACNA1A-257ENST00000638009 WDR60Q8WVS4 1066 aa20.26■□□□□ 0.83
CACNA1A-257ENST00000638009 SLC1A1P43005 524 aa20.26■□□□□ 0.83
CACNA1A-257ENST00000638009 CCDC137Q6PK04 289 aaKnown RBP20.26■□□□□ 0.83
CACNA1A-257ENST00000638009 PADI6Q6TGC4 694 aa20.26■□□□□ 0.83
CACNA1A-257ENST00000638009 PPP3CCP48454 512 aa20.26■□□□□ 0.83
CACNA1A-257ENST00000638009 PLEKHA7Q6IQ23 1121 aa20.26■□□□□ 0.83
CACNA1A-257ENST00000638009 USP28Q96RU2 1077 aa20.26■□□□□ 0.83
CACNA1A-257ENST00000638009 HSPBP1Q9NZL4 362 aa20.26■□□□□ 0.83
CACNA1A-257ENST00000638009 C4orf22Q6V702 233 aa20.26■□□□□ 0.83
CACNA1A-257ENST00000638009 CCDC36Q8IYA8 594 aa20.26■□□□□ 0.83
CACNA1A-257ENST00000638009 THTPAQ9BU02 230 aa20.26■□□□□ 0.83
CACNA1A-257ENST00000638009 DPYSL4O14531 572 aa20.25■□□□□ 0.83
CACNA1A-257ENST00000638009 CABLES1Q8TDN4 633 aa20.25■□□□□ 0.83
CACNA1A-257ENST00000638009 OSBPL8Q9BZF1 889 aa20.25■□□□□ 0.83
CACNA1A-257ENST00000638009 SLITRK2Q9H156 845 aa20.25■□□□□ 0.83
CACNA1A-257ENST00000638009 FAM153AQ9UHL3 310 aa20.25■□□□□ 0.83
CACNA1A-257ENST00000638009 SLC25A13Q9UJS0 675 aa20.25■□□□□ 0.83
CACNA1A-257ENST00000638009 A0A1W2PRG6 482 aa20.25■□□□□ 0.83
CACNA1A-257ENST00000638009 STK25O00506 426 aa20.25■□□□□ 0.83
CACNA1A-257ENST00000638009 ENO3P13929 434 aaPredicted RBP20.25■□□□□ 0.83
CACNA1A-257ENST00000638009 CDK13Q14004 1512 aaKnown RBP20.25■□□□□ 0.83
CACNA1A-257ENST00000638009 RC3H1Q5TC82 1133 aaKnown RBP20.25■□□□□ 0.83
CACNA1A-257ENST00000638009 MIGA2Q7L4E1 593 aa20.25■□□□□ 0.83
CACNA1A-257ENST00000638009 RNPEPQ9H4A4 650 aa20.25■□□□□ 0.83
CACNA1A-257ENST00000638009 HERC5Q9UII4 1024 aaKnown RBP20.25■□□□□ 0.83
CACNA1A-257ENST00000638009 ALDH1A1P00352 501 aa20.25■□□□□ 0.83
CACNA1A-257ENST00000638009 CPA1P15085 419 aa20.25■□□□□ 0.83
CACNA1A-257ENST00000638009 PRIM2P49643 509 aa20.25■□□□□ 0.83
CACNA1A-257ENST00000638009 TCEAL5Q5H9L2 206 aa20.25■□□□□ 0.83
CACNA1A-257ENST00000638009 LIN54Q6MZP7 749 aa20.25■□□□□ 0.83
CACNA1A-257ENST00000638009 TAS2R42Q7RTR8 314 aa20.25■□□□□ 0.83
CACNA1A-257ENST00000638009 ZSWIM6Q9HCJ5 1215 aa20.25■□□□□ 0.83
CACNA1A-257ENST00000638009 NPHS2Q9NP85 383 aa20.25■□□□□ 0.83
CACNA1A-257ENST00000638009 MAP3K20Q9NYL2 800 aaKnown RBP20.25■□□□□ 0.83
CACNA1A-257ENST00000638009 PSMC3IPQ9P2W1 217 aaPredicted RBP20.25■□□□□ 0.83
CACNA1A-257ENST00000638009 BCAR1P56945 870 aa20.25■□□□□ 0.83
CACNA1A-257ENST00000638009 DGKHQ86XP1 1220 aa20.25■□□□□ 0.83
CACNA1A-257ENST00000638009 CAMK1DQ8IU85 385 aa20.25■□□□□ 0.83
CACNA1A-257ENST00000638009 BEST2Q8NFU1 509 aa20.25■□□□□ 0.83
CACNA1A-257ENST00000638009 CLDN3O15551 220 aa20.25■□□□□ 0.83
CACNA1A-257ENST00000638009 EIF2B2P49770 351 aaKnown RBP20.25■□□□□ 0.83
CACNA1A-257ENST00000638009 TRIP10Q15642 601 aa20.25■□□□□ 0.83
CACNA1A-257ENST00000638009 NDUFS3O75489 264 aa20.24■□□□□ 0.83
CACNA1A-257ENST00000638009 GMFBP60983 142 aa20.24■□□□□ 0.83
CACNA1A-257ENST00000638009 FAM89AQ96GI7 184 aa20.24■□□□□ 0.83
CACNA1A-257ENST00000638009 BPIFA3Q9BQP9 254 aa20.24■□□□□ 0.83
CACNA1A-257ENST00000638009 ADI1Q9BV57 179 aa20.24■□□□□ 0.83
CACNA1A-257ENST00000638009 SH3GLB1Q9Y371 365 aa20.24■□□□□ 0.83
CACNA1A-257ENST00000638009 ACTN3Q08043 901 aaPredicted RBP20.24■□□□□ 0.83
CACNA1A-257ENST00000638009 DDR2Q16832 855 aa20.24■□□□□ 0.83
CACNA1A-257ENST00000638009 RFT1Q96AA3 541 aa20.24■□□□□ 0.83
CACNA1A-257ENST00000638009 TEX46H3BTG2 121 aa20.24■□□□□ 0.83
CACNA1A-257ENST00000638009 PSTPIP1O43586 416 aa20.24■□□□□ 0.83
CACNA1A-257ENST00000638009 ZNF862O60290 1169 aa20.24■□□□□ 0.83
CACNA1A-257ENST00000638009 RALAP11233 206 aa20.24■□□□□ 0.83
CACNA1A-257ENST00000638009 CD58P19256 250 aa20.24■□□□□ 0.83
CACNA1A-257ENST00000638009 CACHD1Q5VU97 1274 aa20.24■□□□□ 0.83
CACNA1A-257ENST00000638009 CCDC81Q6ZN84 652 aa20.24■□□□□ 0.83
CACNA1A-257ENST00000638009 VPS33BQ9H267 617 aa20.24■□□□□ 0.83
CACNA1A-257ENST00000638009 KDM5DQ9BY66 1539 aa20.24■□□□□ 0.83
CACNA1A-257ENST00000638009 CFAP74Q9C0B2 1584 aa20.24■□□□□ 0.83
CACNA1A-257ENST00000638009 LOC102724159A0A0B4J2E5 919 aa20.24■□□□□ 0.83
CACNA1A-257ENST00000638009 TM9SF1O15321 606 aa20.24■□□□□ 0.83
CACNA1A-257ENST00000638009 CHP2O43745 196 aa20.24■□□□□ 0.83
CACNA1A-257ENST00000638009 PHKA2P46019 1235 aa20.24■□□□□ 0.83
CACNA1A-257ENST00000638009 PWP2Q15269 919 aaKnown RBP20.24■□□□□ 0.83
CACNA1A-257ENST00000638009 PRMT1Q99873 361 aaKnown RBP20.24■□□□□ 0.83
CACNA1A-257ENST00000638009 ACTR2P61160 394 aa20.24■□□□□ 0.83
CACNA1A-257ENST00000638009 CAND2O75155 1236 aa20.24■□□□□ 0.83
CACNA1A-257ENST00000638009 DARSP14868 501 aaKnown RBP20.24■□□□□ 0.83
CACNA1A-257ENST00000638009 PDIA2Q13087 525 aaKnown RBP20.24■□□□□ 0.83
CACNA1A-257ENST00000638009 TRIM39Q9HCM9 518 aa20.24■□□□□ 0.83
CACNA1A-257ENST00000638009 PKP3Q9Y446 797 aa20.24■□□□□ 0.83
CACNA1A-257ENST00000638009 ZBTB33Q86T24 672 aa20.24■□□□□ 0.83
CACNA1A-257ENST00000638009 OSCP1Q8WVF1 389 aa20.24■□□□□ 0.83
CACNA1A-257ENST00000638009 ABHD10Q9NUJ1 306 aa20.24■□□□□ 0.83
CACNA1A-257ENST00000638009 SLC39A6Q13433 755 aa20.23■□□□□ 0.83
CACNA1A-257ENST00000638009 C12orf60Q5U649 245 aa20.23■□□□□ 0.83
CACNA1A-257ENST00000638009 EMILIN3Q9NT22 766 aa20.23■□□□□ 0.83
CACNA1A-257ENST00000638009 VAMP4O75379 141 aa20.23■□□□□ 0.83
CACNA1A-257ENST00000638009 VEPH1Q14D04 833 aa20.23■□□□□ 0.83
CACNA1A-257ENST00000638009 PDXDC2PQ6P474 469 aa20.23■□□□□ 0.83
CACNA1A-257ENST00000638009 SHCBP1Q8NEM2 672 aa20.23■□□□□ 0.83
CACNA1A-257ENST00000638009 PGBD4Q96DM1 585 aa20.23■□□□□ 0.83
CACNA1A-257ENST00000638009 COMMD9Q9P000 198 aa20.23■□□□□ 0.83
CACNA1A-257ENST00000638009 MAP2P11137 1827 aaKnown RBP20.23■□□□□ 0.83
CACNA1A-257ENST00000638009 CTSWP56202 376 aa20.23■□□□□ 0.83
CACNA1A-257ENST00000638009 ZNF790Q6PG37 636 aa20.23■□□□□ 0.83
CACNA1A-257ENST00000638009 FRMD8Q9BZ67 464 aaPredicted RBP20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms