RNA–Protein interactions for RNA: ENST00000637538.1

CLCN2-220, Transcript of chloride voltage-gated channel 2, humanhuman

TSL 5

Gene CLCN2, Length 1,545 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN2-220ENST00000637538 SOX5P35711 763 aa18.03■□□□□ 0.48
CLCN2-220ENST00000637538 STAT1P42224 750 aa18.03■□□□□ 0.48
CLCN2-220ENST00000637538 ZBTB6Q15916 424 aa18.03■□□□□ 0.48
CLCN2-220ENST00000637538 C1orf53Q5VUE5 145 aa18.03■□□□□ 0.48
CLCN2-220ENST00000637538 ANKRD33Q7Z3H0 272 aa18.03■□□□□ 0.48
CLCN2-220ENST00000637538 CCDC170Q8IYT3 715 aa18.03■□□□□ 0.48
CLCN2-220ENST00000637538 CCAR2Q8N163 923 aaKnown RBP18.03■□□□□ 0.48
CLCN2-220ENST00000637538 C1orf127Q8N9H9 656 aa18.03■□□□□ 0.48
CLCN2-220ENST00000637538 SHC3Q92529 594 aa18.03■□□□□ 0.48
CLCN2-220ENST00000637538 ANKRD36BP1Q96IX9 119 aa18.03■□□□□ 0.48
CLCN2-220ENST00000637538 TRIM6Q9C030 488 aaPredicted RBP18.03■□□□□ 0.48
CLCN2-220ENST00000637538 RNF39Q9H2S5 420 aa18.03■□□□□ 0.48
CLCN2-220ENST00000637538 NHEJ1Q9H9Q4 299 aaPredicted RBP18.03■□□□□ 0.48
CLCN2-220ENST00000637538 SSU72P8A0A1W2PR75 194 aa18.02■□□□□ 0.47
CLCN2-220ENST00000637538 MGEA5O60502 916 aa18.02■□□□□ 0.47
CLCN2-220ENST00000637538 PNMA6AP0CW24 399 aaPredicted RBP18.02■□□□□ 0.47
CLCN2-220ENST00000637538 NFX1Q12986 1120 aaKnown RBP18.02■□□□□ 0.47
CLCN2-220ENST00000637538 PAK2Q13177 524 aa18.02■□□□□ 0.47
CLCN2-220ENST00000637538 TMEM132DQ14C87 1099 aa18.02■□□□□ 0.47
CLCN2-220ENST00000637538 ASIC2Q16515 512 aa18.02■□□□□ 0.47
CLCN2-220ENST00000637538 TWF2Q6IBS0 349 aaKnown RBP18.02■□□□□ 0.47
CLCN2-220ENST00000637538 SLC39A5Q6ZMH5 540 aa18.02■□□□□ 0.47
CLCN2-220ENST00000637538 ELMO3Q96BJ8 720 aa18.02■□□□□ 0.47
CLCN2-220ENST00000637538 FAM81BQ96LP2 452 aa18.02■□□□□ 0.47
CLCN2-220ENST00000637538 ZMAT2Q96NC0 199 aaKnown RBP18.02■□□□□ 0.47
CLCN2-220ENST00000637538 XYLT2Q9H1B5 865 aa18.02■□□□□ 0.47
CLCN2-220ENST00000637538 PCDHB2Q9Y5E7 798 aa18.02■□□□□ 0.47
CLCN2-220ENST00000637538 ADGRG1Q9Y653 693 aa18.02■□□□□ 0.47
CLCN2-220ENST00000637538 TRIP11Q15643 1979 aa18.02■□□□□ 0.47
CLCN2-220ENST00000637538 USP27XA6NNY8 438 aa18.01■□□□□ 0.47
CLCN2-220ENST00000637538 FOXN3O00409 490 aaPredicted RBP18.01■□□□□ 0.47
CLCN2-220ENST00000637538 PHACTR2O75167 634 aa18.01■□□□□ 0.47
CLCN2-220ENST00000637538 NDUFA10O95299 355 aa18.01■□□□□ 0.47
CLCN2-220ENST00000637538 YARSP54577 528 aaKnown RBP18.01■□□□□ 0.47
CLCN2-220ENST00000637538 MFAP3P55082 362 aa18.01■□□□□ 0.47
CLCN2-220ENST00000637538 MYL6P60660 151 aa18.01■□□□□ 0.47
CLCN2-220ENST00000637538 WDR44Q5JSH3 913 aa18.01■□□□□ 0.47
CLCN2-220ENST00000637538 ENOSF1Q7L5Y1 443 aa18.01■□□□□ 0.47
CLCN2-220ENST00000637538 MRPL10Q7Z7H8 261 aaKnown RBP18.01■□□□□ 0.47
CLCN2-220ENST00000637538 PPM1KQ8N3J5 372 aa18.01■□□□□ 0.47
CLCN2-220ENST00000637538 OLIG1Q8TAK6 271 aa18.01■□□□□ 0.47
CLCN2-220ENST00000637538 TSPAN18Q96SJ8 248 aa18.01■□□□□ 0.47
CLCN2-220ENST00000637538 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.01■□□□□ 0.47
CLCN2-220ENST00000637538 C1orf112Q9NSG2 853 aa18.01■□□□□ 0.47
CLCN2-220ENST00000637538 FAM105AQ9NUU6 356 aa18.01■□□□□ 0.47
CLCN2-220ENST00000637538 REXO2Q9Y3B8 237 aaKnown RBP18.01■□□□□ 0.47
CLCN2-220ENST00000637538 NUB1Q9Y5A7 615 aa18.01■□□□□ 0.47
CLCN2-220ENST00000637538 EPN1Q9Y6I3 576 aaPredicted RBP18.01■□□□□ 0.47
CLCN2-220ENST00000637538 PITPNM1O00562 1244 aa18■□□□□ 0.47
CLCN2-220ENST00000637538 ZNF623O75123 536 aa18■□□□□ 0.47
CLCN2-220ENST00000637538 LCA5LO95447 670 aa18■□□□□ 0.47
CLCN2-220ENST00000637538 KCNE1P15382 129 aa18■□□□□ 0.47
CLCN2-220ENST00000637538 SELPP16109 830 aa18■□□□□ 0.47
CLCN2-220ENST00000637538 FERP16591 822 aa18■□□□□ 0.47
CLCN2-220ENST00000637538 AKAP5P24588 427 aa18■□□□□ 0.47
CLCN2-220ENST00000637538 EIF4A3P38919 411 aaKnown RBP18■□□□□ 0.47
CLCN2-220ENST00000637538 NOP14P78316 857 aaKnown RBP18■□□□□ 0.47
CLCN2-220ENST00000637538 BFSP2Q13515 415 aa18■□□□□ 0.47
CLCN2-220ENST00000637538 GPNMBQ14956 572 aa18■□□□□ 0.47
CLCN2-220ENST00000637538 ARHGAP44Q17R89 818 aa18■□□□□ 0.47
CLCN2-220ENST00000637538 SMYD5Q6GMV2 418 aa18■□□□□ 0.47
CLCN2-220ENST00000637538 SPOPLQ6IQ16 392 aa18■□□□□ 0.47
CLCN2-220ENST00000637538 LRRC8DQ7L1W4 858 aa18■□□□□ 0.47
CLCN2-220ENST00000637538 GPIHBP1Q8IV16 184 aa18■□□□□ 0.47
CLCN2-220ENST00000637538 FMNL3Q8IVF7 1028 aa18■□□□□ 0.47
CLCN2-220ENST00000637538 FAM71AQ8IYT1 594 aa18■□□□□ 0.47
CLCN2-220ENST00000637538 TMEM130Q8N3G9 435 aa18■□□□□ 0.47
CLCN2-220ENST00000637538 DIS3LQ8TF46 1054 aaKnown RBP18■□□□□ 0.47
CLCN2-220ENST00000637538 JAKMIP2Q96AA8 810 aa18■□□□□ 0.47
CLCN2-220ENST00000637538 TOX2Q96NM4 488 aa18■□□□□ 0.47
CLCN2-220ENST00000637538 DESI2Q9BSY9 194 aa18■□□□□ 0.47
CLCN2-220ENST00000637538 SYT11Q9BT88 431 aa18■□□□□ 0.47
CLCN2-220ENST00000637538 PPP2R2CQ9Y2T4 447 aa18■□□□□ 0.47
CLCN2-220ENST00000637538 BZW2Q9Y6E2 419 aaKnown RBP18■□□□□ 0.47
CLCN2-220ENST00000637538 UMODL1Q5DID0 1318 aa18■□□□□ 0.47
CLCN2-220ENST00000637538 EIF3CLB5ME19 914 aaKnown RBP17.99■□□□□ 0.47
CLCN2-220ENST00000637538 EVI5O60447 810 aa17.99■□□□□ 0.47
CLCN2-220ENST00000637538 GFPT2O94808 682 aa17.99■□□□□ 0.47
CLCN2-220ENST00000637538 KLHL30Q0D2K2 578 aa17.99■□□□□ 0.47
CLCN2-220ENST00000637538 SGSM1Q2NKQ1 1148 aa17.99■□□□□ 0.47
CLCN2-220ENST00000637538 REXO1L1PQ8IX06 675 aa17.99■□□□□ 0.47
CLCN2-220ENST00000637538 UBR7Q8N806 425 aa17.99■□□□□ 0.47
CLCN2-220ENST00000637538 TAF4BQ92750 862 aa17.99■□□□□ 0.47
CLCN2-220ENST00000637538 KIF12Q96FN5 646 aa17.99■□□□□ 0.47
CLCN2-220ENST00000637538 EIF3CQ99613 913 aaKnown RBP17.99■□□□□ 0.47
CLCN2-220ENST00000637538 ARID3AQ99856 593 aa17.99■□□□□ 0.47
CLCN2-220ENST00000637538 HAUS4Q9H6D7 363 aa17.99■□□□□ 0.47
CLCN2-220ENST00000637538 VRTNQ9H8Y1 702 aa17.99■□□□□ 0.47
CLCN2-220ENST00000637538 ITGA11Q9UKX5 1188 aa17.99■□□□□ 0.47
CLCN2-220ENST00000637538 TANC1Q9C0D5 1861 aa17.99■□□□□ 0.47
CLCN2-220ENST00000637538 ZNF263O14978 683 aa17.98■□□□□ 0.47
CLCN2-220ENST00000637538 STAU1O95793 577 aaKnown RBP17.98■□□□□ 0.47
CLCN2-220ENST00000637538 ZSCAN20P17040 1043 aaPredicted RBP17.98■□□□□ 0.47
CLCN2-220ENST00000637538 ACO1P21399 889 aaKnown RBP17.98■□□□□ 0.47
CLCN2-220ENST00000637538 ANXA13P27216 316 aa17.98■□□□□ 0.47
CLCN2-220ENST00000637538 CYLC1P35663 651 aaPredicted RBP17.98■□□□□ 0.47
CLCN2-220ENST00000637538 RAB27AP51159 221 aa17.98■□□□□ 0.47
CLCN2-220ENST00000637538 PTK2Q05397 1052 aa17.98■□□□□ 0.47
CLCN2-220ENST00000637538 CUL2Q13617 745 aa17.98■□□□□ 0.47
CLCN2-220ENST00000637538 ZNF571Q7Z3V5 609 aaPredicted RBP17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms