RNA–Protein interactions for RNA: ENST00000637450.1

CLN6-220, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3

Gene CLN6, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-220ENST00000637450 GPC5P78333 572 aa20.2■□□□□ 0.82
CLN6-220ENST00000637450 STRN3Q13033 797 aa20.2■□□□□ 0.82
CLN6-220ENST00000637450 PABPC1LQ4VXU2 614 aaKnown RBP20.2■□□□□ 0.82
CLN6-220ENST00000637450 VARS2Q5ST30 1063 aaKnown RBP20.2■□□□□ 0.82
CLN6-220ENST00000637450 ARL6IP4Q66PJ3 421 aaKnown RBP20.2■□□□□ 0.82
CLN6-220ENST00000637450 MTSS1LQ765P7 747 aa20.2■□□□□ 0.82
CLN6-220ENST00000637450 C18orf25Q96B23 403 aaPredicted RBP20.2■□□□□ 0.82
CLN6-220ENST00000637450 PLIN2Q99541 437 aa20.2■□□□□ 0.82
CLN6-220ENST00000637450 KCND2Q9NZV8 630 aa20.2■□□□□ 0.82
CLN6-220ENST00000637450 DOCK6Q96HP0 2047 aa20.19■□□□□ 0.82
CLN6-220ENST00000637450 SYN3O14994 580 aa20.19■□□□□ 0.82
CLN6-220ENST00000637450 PLA2G4BP0C869 781 aa20.19■□□□□ 0.82
CLN6-220ENST00000637450 MAPTP10636 758 aaKnown RBP20.19■□□□□ 0.82
CLN6-220ENST00000637450 ROR1Q01973 937 aa20.19■□□□□ 0.82
CLN6-220ENST00000637450 MRPL58Q14197 206 aaKnown RBP20.19■□□□□ 0.82
CLN6-220ENST00000637450 SLC10A6Q3KNW5 377 aa20.19■□□□□ 0.82
CLN6-220ENST00000637450 NKD2Q969F2 451 aaPredicted RBP20.19■□□□□ 0.82
CLN6-220ENST00000637450 SIT1Q9Y3P8 196 aa20.19■□□□□ 0.82
CLN6-220ENST00000637450 ARHGEF37A1IGU5 675 aa20.18■□□□□ 0.82
CLN6-220ENST00000637450 H3BQV1 296 aa20.18■□□□□ 0.82
CLN6-220ENST00000637450 CD2BP2O95400 341 aaKnown RBP20.18■□□□□ 0.82
CLN6-220ENST00000637450 HARSP12081 509 aaKnown RBP20.18■□□□□ 0.82
CLN6-220ENST00000637450 STARD6P59095 220 aa20.18■□□□□ 0.82
CLN6-220ENST00000637450 MCL1Q07820 350 aa20.18■□□□□ 0.82
CLN6-220ENST00000637450 NOLC1Q14978 699 aaKnown RBP eCLIP20.18■□□□□ 0.82
CLN6-220ENST00000637450 TMEM119Q4V9L6 283 aa20.18■□□□□ 0.82
CLN6-220ENST00000637450 ZPBP2Q6X784 338 aa20.18■□□□□ 0.82
CLN6-220ENST00000637450 NPAS3Q8IXF0 933 aa20.18■□□□□ 0.82
CLN6-220ENST00000637450 AVENQ9NQS1 362 aaPredicted RBP20.18■□□□□ 0.82
CLN6-220ENST00000637450 DLGAP2Q9P1A6 1054 aa20.18■□□□□ 0.82
CLN6-220ENST00000637450 ANKFY1Q9P2R3 1169 aa20.18■□□□□ 0.82
CLN6-220ENST00000637450 NUB1Q9Y5A7 615 aa20.18■□□□□ 0.82
CLN6-220ENST00000637450 NPHP3-ACAD11A0A0J9YXS1 232 aa20.17■□□□□ 0.82
CLN6-220ENST00000637450 WDR27A2RRH5 827 aa20.17■□□□□ 0.82
CLN6-220ENST00000637450 H7C4K7 107 aa20.17■□□□□ 0.82
CLN6-220ENST00000637450 CLDN3O15551 220 aa20.17■□□□□ 0.82
CLN6-220ENST00000637450 DCNP07585 359 aaKnown RBP20.17■□□□□ 0.82
CLN6-220ENST00000637450 ATF2P15336 505 aa20.17■□□□□ 0.82
CLN6-220ENST00000637450 ELF1P32519 619 aa20.17■□□□□ 0.82
CLN6-220ENST00000637450 SEZ6Q53EL9 994 aa20.17■□□□□ 0.82
CLN6-220ENST00000637450 ARSHQ5FYA8 562 aa20.17■□□□□ 0.82
CLN6-220ENST00000637450 SHDQ96IW2 340 aa20.17■□□□□ 0.82
CLN6-220ENST00000637450 CDK5RAP3Q96JB5 506 aa20.17■□□□□ 0.82
CLN6-220ENST00000637450 SUSD3Q96L08 255 aa20.17■□□□□ 0.82
CLN6-220ENST00000637450 FBXL5Q9UKA1 691 aa20.17■□□□□ 0.82
CLN6-220ENST00000637450 MRPS23Q9Y3D9 190 aaKnown RBP20.17■□□□□ 0.82
CLN6-220ENST00000637450 SLC26A4O43511 780 aa20.16■□□□□ 0.82
CLN6-220ENST00000637450 RHOP08100 348 aa20.16■□□□□ 0.82
CLN6-220ENST00000637450 PTPN2P17706 415 aa20.16■□□□□ 0.82
CLN6-220ENST00000637450 SLC5A9Q2M3M2 681 aa20.16■□□□□ 0.82
CLN6-220ENST00000637450 SPECC1Q5M775 1068 aa20.16■□□□□ 0.82
CLN6-220ENST00000637450 TCEAL8Q8IYN2 117 aa20.16■□□□□ 0.82
CLN6-220ENST00000637450 KCNN1Q92952 543 aa20.16■□□□□ 0.82
CLN6-220ENST00000637450 AK8Q96MA6 479 aa20.16■□□□□ 0.82
CLN6-220ENST00000637450 HAPLN2Q9GZV7 340 aa20.16■□□□□ 0.82
CLN6-220ENST00000637450 PLEKHA5Q9HAU0 1116 aa20.16■□□□□ 0.82
CLN6-220ENST00000637450 GDE1Q9NZC3 331 aa20.16■□□□□ 0.82
CLN6-220ENST00000637450 LARSQ9P2J5 1176 aaKnown RBP20.16■□□□□ 0.82
CLN6-220ENST00000637450 FAM186AA6NE01 2351 aa20.16■□□□□ 0.82
CLN6-220ENST00000637450 TRIP11Q15643 1979 aa20.15■□□□□ 0.82
CLN6-220ENST00000637450 H0YCG3 227 aa20.15■□□□□ 0.82
CLN6-220ENST00000637450 PRRG1O14668 218 aa20.15■□□□□ 0.82
CLN6-220ENST00000637450 SEC24AO95486 1093 aa20.15■□□□□ 0.82
CLN6-220ENST00000637450 LRG1P02750 347 aa20.15■□□□□ 0.82
CLN6-220ENST00000637450 CENPBP07199 599 aaPredicted RBP20.15■□□□□ 0.82
CLN6-220ENST00000637450 NCKAP1LP55160 1127 aa20.15■□□□□ 0.82
CLN6-220ENST00000637450 ARPP19P56211 112 aa20.15■□□□□ 0.82
CLN6-220ENST00000637450 CACNB1Q02641 598 aaPredicted RBP20.15■□□□□ 0.82
CLN6-220ENST00000637450 SNW1Q13573 536 aaKnown RBP20.15■□□□□ 0.82
CLN6-220ENST00000637450 SLC44A4Q53GD3 710 aa20.15■□□□□ 0.82
CLN6-220ENST00000637450 TPGS2Q68CL5 300 aa20.15■□□□□ 0.82
CLN6-220ENST00000637450 POTEHQ6S545 545 aa20.15■□□□□ 0.82
CLN6-220ENST00000637450 ING5Q8WYH8 240 aa20.15■□□□□ 0.82
CLN6-220ENST00000637450 TBC1D32Q96NH3 1257 aa20.15■□□□□ 0.82
CLN6-220ENST00000637450 KXD1Q9BQD3 176 aa20.15■□□□□ 0.82
CLN6-220ENST00000637450 FOXQ1Q9C009 403 aa20.15■□□□□ 0.82
CLN6-220ENST00000637450 CYP4F11Q9HBI6 524 aa20.15■□□□□ 0.82
CLN6-220ENST00000637450 WDR87Q6ZQQ6 2873 aa20.15■□□□□ 0.82
CLN6-220ENST00000637450 CLTAP09496 248 aa20.14■□□□□ 0.81
CLN6-220ENST00000637450 CXCL8P10145 99 aa20.14■□□□□ 0.81
CLN6-220ENST00000637450 GLULP15104 373 aa20.14■□□□□ 0.81
CLN6-220ENST00000637450 MCM4P33991 863 aa20.14■□□□□ 0.81
CLN6-220ENST00000637450 MCM2P49736 904 aa20.14■□□□□ 0.81
CLN6-220ENST00000637450 CTXN3Q4LDR2 81 aa20.14■□□□□ 0.81
CLN6-220ENST00000637450 HAUS6Q7Z4H7 955 aa20.14■□□□□ 0.81
CLN6-220ENST00000637450 APPL2Q8NEU8 664 aa20.14■□□□□ 0.81
CLN6-220ENST00000637450 PJA1Q8NG27 643 aa20.14■□□□□ 0.81
CLN6-220ENST00000637450 DDX12PQ92771 950 aa20.14■□□□□ 0.81
CLN6-220ENST00000637450 MCRS1Q96EZ8 462 aa20.14■□□□□ 0.81
CLN6-220ENST00000637450 DDX23Q9BUQ8 820 aaKnown RBP20.14■□□□□ 0.81
CLN6-220ENST00000637450 TUBGCP4Q9UGJ1 667 aa20.14■□□□□ 0.81
CLN6-220ENST00000637450 ODF2LQ9ULJ1 636 aa20.14■□□□□ 0.81
CLN6-220ENST00000637450 SMC3Q9UQE7 1217 aa20.14■□□□□ 0.81
CLN6-220ENST00000637450 KANSL1LA0AUZ9 987 aa20.13■□□□□ 0.81
CLN6-220ENST00000637450 TTC26A0AVF1 554 aa20.13■□□□□ 0.81
CLN6-220ENST00000637450 ECI2O75521 394 aa20.13■□□□□ 0.81
CLN6-220ENST00000637450 LRPAP1P30533 357 aa20.13■□□□□ 0.81
CLN6-220ENST00000637450 MATR3P43243 847 aaKnown RBP eCLIP20.13■□□□□ 0.81
CLN6-220ENST00000637450 PFKPQ01813 784 aa20.13■□□□□ 0.81
CLN6-220ENST00000637450 PRKCQQ04759 706 aa20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms