RNA–Protein interactions for RNA: ENST00000636792.1

UPF3B-205, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3B, Length 834 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-205ENST00000636792 FAM200AQ8TCP9 573 aa7.31□□□□□ -1.24
UPF3B-205ENST00000636792 PPP1R13LQ8WUF5 828 aa7.31□□□□□ -1.24
UPF3B-205ENST00000636792 NELFBQ8WX92 580 aa7.31□□□□□ -1.24
UPF3B-205ENST00000636792 POMGNT1Q8WZA1 660 aa7.31□□□□□ -1.24
UPF3B-205ENST00000636792 HERVK_113Q902F9 699 aa7.31□□□□□ -1.24
UPF3B-205ENST00000636792 SCLYQ96I15 445 aa7.31□□□□□ -1.24
UPF3B-205ENST00000636792 TARS2Q9BW92 718 aaKnown RBP7.31□□□□□ -1.24
UPF3B-205ENST00000636792 MRPL9Q9BYD2 267 aaKnown RBP7.31□□□□□ -1.24
UPF3B-205ENST00000636792 FGFBP2Q9BYJ0 223 aa7.31□□□□□ -1.24
UPF3B-205ENST00000636792 THAP9Q9H5L6 903 aa7.31□□□□□ -1.24
UPF3B-205ENST00000636792 ASB7Q9H672 318 aa7.31□□□□□ -1.24
UPF3B-205ENST00000636792 ENAMQ9NRM1 1142 aa7.31□□□□□ -1.24
UPF3B-205ENST00000636792 FAM105AQ9NUU6 356 aa7.31□□□□□ -1.24
UPF3B-205ENST00000636792 DMAC2Q9NW81 257 aa7.31□□□□□ -1.24
UPF3B-205ENST00000636792 HSPBP1Q9NZL4 362 aa7.31□□□□□ -1.24
UPF3B-205ENST00000636792 AGO2Q9UKV8 859 aaKnown RBP7.31□□□□□ -1.24
UPF3B-205ENST00000636792 NLRC5Q86WI3 1866 aa7.3□□□□□ -1.24
UPF3B-205ENST00000636792 ZNF233A6NK53 670 aa7.3□□□□□ -1.24
UPF3B-205ENST00000636792 PMM2O15305 246 aa7.3□□□□□ -1.24
UPF3B-205ENST00000636792 B4GALT5O43286 388 aa7.3□□□□□ -1.24
UPF3B-205ENST00000636792 FAM189A1O60320 539 aa7.3□□□□□ -1.24
UPF3B-205ENST00000636792 FGBP02675 491 aa7.3□□□□□ -1.24
UPF3B-205ENST00000636792 EPB41P11171 864 aaKnown RBP7.3□□□□□ -1.24
UPF3B-205ENST00000636792 EEF1GP26641 437 aaKnown RBP7.3□□□□□ -1.24
UPF3B-205ENST00000636792 ADSSP30520 456 aa7.3□□□□□ -1.24
UPF3B-205ENST00000636792 HOXD13P35453 343 aa7.3□□□□□ -1.24
UPF3B-205ENST00000636792 PSMC2P35998 433 aaKnown RBP7.3□□□□□ -1.24
UPF3B-205ENST00000636792 ZNF165P49910 485 aa7.3□□□□□ -1.24
UPF3B-205ENST00000636792 CBLBQ13191 982 aa7.3□□□□□ -1.24
UPF3B-205ENST00000636792 TPD52L1Q16890 204 aaPredicted RBP7.3□□□□□ -1.24
UPF3B-205ENST00000636792 XKR4Q5GH76 650 aa7.3□□□□□ -1.24
UPF3B-205ENST00000636792 UBXN11Q5T124 520 aa7.3□□□□□ -1.24
UPF3B-205ENST00000636792 RASIP1Q5U651 963 aa7.3□□□□□ -1.24
UPF3B-205ENST00000636792 SPATA1Q5VX52 437 aa7.3□□□□□ -1.24
UPF3B-205ENST00000636792 LRRC55Q6ZSA7 311 aa7.3□□□□□ -1.24
UPF3B-205ENST00000636792 FRMD5Q7Z6J6 570 aa7.3□□□□□ -1.24
UPF3B-205ENST00000636792 FILIP1Q7Z7B0 1213 aa7.3□□□□□ -1.24
UPF3B-205ENST00000636792 ECHDC2Q86YB7 292 aa7.3□□□□□ -1.24
UPF3B-205ENST00000636792 NELFCDQ8IXH7 590 aa7.3□□□□□ -1.24
UPF3B-205ENST00000636792 SMYD4Q8IYR2 804 aaPredicted RBP7.3□□□□□ -1.24
UPF3B-205ENST00000636792 CSGALNACT2Q8N6G5 542 aa7.3□□□□□ -1.24
UPF3B-205ENST00000636792 GLIS3Q8NEA6 775 aa7.3□□□□□ -1.24
UPF3B-205ENST00000636792 ANKRD20A12PQ8NF67 263 aa7.3□□□□□ -1.24
UPF3B-205ENST00000636792 ERCC4Q92889 916 aaPredicted RBP7.3□□□□□ -1.24
UPF3B-205ENST00000636792 HPS3Q969F9 1004 aa7.3□□□□□ -1.24
UPF3B-205ENST00000636792 PPP1R16BQ96T49 567 aa7.3□□□□□ -1.24
UPF3B-205ENST00000636792 ADAM2Q99965 735 aa7.3□□□□□ -1.24
UPF3B-205ENST00000636792 TCHPQ9BT92 498 aa7.3□□□□□ -1.24
UPF3B-205ENST00000636792 MSTO1Q9BUK6 570 aa7.3□□□□□ -1.24
UPF3B-205ENST00000636792 TMX1Q9H3N1 280 aa7.3□□□□□ -1.24
UPF3B-205ENST00000636792 TSPY26PQ9H489 355 aa7.3□□□□□ -1.24
UPF3B-205ENST00000636792 SLC38A7Q9NVC3 462 aa7.3□□□□□ -1.24
UPF3B-205ENST00000636792 CNTN3Q9P232 1028 aa7.3□□□□□ -1.24
UPF3B-205ENST00000636792 KANSL3Q9P2N6 904 aa7.3□□□□□ -1.24
UPF3B-205ENST00000636792 ANKFY1Q9P2R3 1169 aa7.3□□□□□ -1.24
UPF3B-205ENST00000636792 STK39Q9UEW8 545 aa7.3□□□□□ -1.24
UPF3B-205ENST00000636792 CPSF3Q9UKF6 684 aaKnown RBP7.3□□□□□ -1.24
UPF3B-205ENST00000636792 CTNND2Q9UQB3 1225 aa7.3□□□□□ -1.24
UPF3B-205ENST00000636792 C2CD2Q9Y426 696 aa7.3□□□□□ -1.24
UPF3B-205ENST00000636792 IPPQ9Y573 584 aa7.3□□□□□ -1.24
UPF3B-205ENST00000636792 TTC26A0AVF1 554 aa7.29□□□□□ -1.24
UPF3B-205ENST00000636792 BECN2A8MW95 431 aa7.29□□□□□ -1.24
UPF3B-205ENST00000636792 GOLGA6L19H0YKK7 550 aa7.29□□□□□ -1.24
UPF3B-205ENST00000636792 MSTNO14793 375 aa7.29□□□□□ -1.24
UPF3B-205ENST00000636792 P4HA2O15460 535 aa7.29□□□□□ -1.24
UPF3B-205ENST00000636792 MGEA5O60502 916 aa7.29□□□□□ -1.24
UPF3B-205ENST00000636792 EXOC3O60645 756 aa7.29□□□□□ -1.24
UPF3B-205ENST00000636792 N4BP1O75113 896 aaKnown RBP7.29□□□□□ -1.24
UPF3B-205ENST00000636792 NPTXRO95502 500 aa7.29□□□□□ -1.24
UPF3B-205ENST00000636792 EDN1P05305 212 aa7.29□□□□□ -1.24
UPF3B-205ENST00000636792 TPM2P07951 284 aa7.29□□□□□ -1.24
UPF3B-205ENST00000636792 ITGA4P13612 1032 aa7.29□□□□□ -1.24
UPF3B-205ENST00000636792 KRT13P13646 458 aa7.29□□□□□ -1.24
UPF3B-205ENST00000636792 KCNE1P15382 129 aa7.29□□□□□ -1.24
UPF3B-205ENST00000636792 CYP3A5P20815 502 aa7.29□□□□□ -1.24
UPF3B-205ENST00000636792 ITGB8P26012 769 aa7.29□□□□□ -1.24
UPF3B-205ENST00000636792 GTF2H1P32780 548 aa7.29□□□□□ -1.24
UPF3B-205ENST00000636792 MATR3P43243 847 aaKnown RBP eCLIP7.29□□□□□ -1.24
UPF3B-205ENST00000636792 WDR5P61964 334 aaKnown RBP7.29□□□□□ -1.24
UPF3B-205ENST00000636792 CLDN10P78369 228 aa7.29□□□□□ -1.24
UPF3B-205ENST00000636792 DHX9Q08211 1270 aaKnown RBP7.29□□□□□ -1.24
UPF3B-205ENST00000636792 KCNA1Q09470 495 aa7.29□□□□□ -1.24
UPF3B-205ENST00000636792 BFSP1Q12934 665 aa7.29□□□□□ -1.24
UPF3B-205ENST00000636792 GRIK3Q13003 919 aa7.29□□□□□ -1.24
UPF3B-205ENST00000636792 ADAM9Q13443 819 aa7.29□□□□□ -1.24
UPF3B-205ENST00000636792 PSMD6Q15008 389 aa7.29□□□□□ -1.24
UPF3B-205ENST00000636792 SNRNP35Q16560 246 aaKnown RBP7.29□□□□□ -1.24
UPF3B-205ENST00000636792 ANO6Q4KMQ2 910 aa7.29□□□□□ -1.24
UPF3B-205ENST00000636792 TMEM240Q5SV17 173 aa7.29□□□□□ -1.24
UPF3B-205ENST00000636792 XP32Q5T750 250 aa7.29□□□□□ -1.24
UPF3B-205ENST00000636792 EEF1DP3Q658K8 133 aa7.29□□□□□ -1.24
UPF3B-205ENST00000636792 ANKRD40Q6AI12 368 aa7.29□□□□□ -1.24
UPF3B-205ENST00000636792 KLHL10Q6JEL2 608 aa7.29□□□□□ -1.24
UPF3B-205ENST00000636792 GLB1LQ6UWU2 654 aa7.29□□□□□ -1.24
UPF3B-205ENST00000636792 DEFB128Q7Z7B8 93 aa7.29□□□□□ -1.24
UPF3B-205ENST00000636792 WDR49Q8IV35 697 aa7.29□□□□□ -1.24
UPF3B-205ENST00000636792 CMTR2Q8IYT2 770 aaKnown RBP7.29□□□□□ -1.24
UPF3B-205ENST00000636792 URGCPQ8TCY9 931 aa7.29□□□□□ -1.24
UPF3B-205ENST00000636792 BADQ92934 168 aa7.29□□□□□ -1.24
UPF3B-205ENST00000636792 TOP1MTQ969P6 601 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms