RNA–Protein interactions for RNA: ENST00000636674.1

CLN6-215, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 2,005 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-215ENST00000636674 SCP2P22307 547 aa15.49■□□□□ 0.07
CLN6-215ENST00000636674 CHRNA5P30532 468 aa15.49■□□□□ 0.07
CLN6-215ENST00000636674 NPTX2P47972 431 aa15.49■□□□□ 0.07
CLN6-215ENST00000636674 DMP1Q13316 513 aaPredicted RBP15.49■□□□□ 0.07
CLN6-215ENST00000636674 LRRC14Q15048 493 aa15.49■□□□□ 0.07
CLN6-215ENST00000636674 CCNG2Q16589 344 aa15.49■□□□□ 0.07
CLN6-215ENST00000636674 FAM133BQ5BKY9 247 aaKnown RBP15.49■□□□□ 0.07
CLN6-215ENST00000636674 SLC39A4Q6P5W5 647 aa15.49■□□□□ 0.07
CLN6-215ENST00000636674 TLDC1Q6P9B6 456 aa15.49■□□□□ 0.07
CLN6-215ENST00000636674 C15orf39Q6ZRI6 1047 aa15.49■□□□□ 0.07
CLN6-215ENST00000636674 SPATA21Q7Z572 469 aa15.49■□□□□ 0.07
CLN6-215ENST00000636674 RDM1Q8NG50 284 aa15.49■□□□□ 0.07
CLN6-215ENST00000636674 ATG4AQ8WYN0 398 aa15.49■□□□□ 0.07
CLN6-215ENST00000636674 FAM212AQ96EL1 285 aa15.49■□□□□ 0.07
CLN6-215ENST00000636674 MAGEB18Q96M61 343 aa15.49■□□□□ 0.07
CLN6-215ENST00000636674 EBF2Q9HAK2 575 aa15.49■□□□□ 0.07
CLN6-215ENST00000636674 TOPORSQ9NS56 1045 aaPredicted RBP15.49■□□□□ 0.07
CLN6-215ENST00000636674 UMODL1Q5DID0 1318 aa15.49■□□□□ 0.07
CLN6-215ENST00000636674 YDJCA8MPS7 323 aa15.48■□□□□ 0.07
CLN6-215ENST00000636674 WDR64B1ANS9 1081 aa15.48■□□□□ 0.07
CLN6-215ENST00000636674 PROSCO94903 275 aa15.48■□□□□ 0.07
CLN6-215ENST00000636674 CYP1A1P04798 512 aaPredicted RBP15.48■□□□□ 0.07
CLN6-215ENST00000636674 BRAFP15056 766 aa15.48■□□□□ 0.07
CLN6-215ENST00000636674 SKIV2L2P42285 1042 aaKnown RBP15.48■□□□□ 0.07
CLN6-215ENST00000636674 KRT76Q01546 638 aa15.48■□□□□ 0.07
CLN6-215ENST00000636674 SNX1Q13596 522 aa15.48■□□□□ 0.07
CLN6-215ENST00000636674 ACVR2BQ13705 512 aa15.48■□□□□ 0.07
CLN6-215ENST00000636674 STAT4Q14765 748 aa15.48■□□□□ 0.07
CLN6-215ENST00000636674 KYNUQ16719 465 aa15.48■□□□□ 0.07
CLN6-215ENST00000636674 FAM102BQ5T8I3 360 aa15.48■□□□□ 0.07
CLN6-215ENST00000636674 FKBP1CQ5VVH2 108 aa15.48■□□□□ 0.07
CLN6-215ENST00000636674 NUGGCQ68CJ6 796 aa15.48■□□□□ 0.07
CLN6-215ENST00000636674 OTUD6AQ7L8S5 288 aa15.48■□□□□ 0.07
CLN6-215ENST00000636674 CCDC89Q8N998 374 aa15.48■□□□□ 0.07
CLN6-215ENST00000636674 RXFP1Q9HBX9 757 aa15.48■□□□□ 0.07
CLN6-215ENST00000636674 PIM2Q9P1W9 311 aa15.48■□□□□ 0.07
CLN6-215ENST00000636674 CTNNAL1Q9UBT7 734 aa15.48■□□□□ 0.07
CLN6-215ENST00000636674 ZNF70Q9UC06 446 aaPredicted RBP15.48■□□□□ 0.07
CLN6-215ENST00000636674 ANAPC5Q9UJX4 755 aa15.48■□□□□ 0.07
CLN6-215ENST00000636674 PCDHB2Q9Y5E7 798 aa15.48■□□□□ 0.07
CLN6-215ENST00000636674 DENND3A2RUS2 1198 aa15.48■□□□□ 0.07
CLN6-215ENST00000636674 GARTP22102 1010 aa15.48■□□□□ 0.07
CLN6-215ENST00000636674 COPS2P61201 443 aa15.48■□□□□ 0.07
CLN6-215ENST00000636674 CCDC15Q0P6D6 951 aa15.48■□□□□ 0.07
CLN6-215ENST00000636674 XKR9Q5GH70 373 aa15.48■□□□□ 0.07
CLN6-215ENST00000636674 RNF43Q68DV7 783 aa15.48■□□□□ 0.07
CLN6-215ENST00000636674 PPP1R21Q6ZMI0 780 aa15.48■□□□□ 0.07
CLN6-215ENST00000636674 ARHGEF18Q6ZSZ5 1173 aa15.48■□□□□ 0.07
CLN6-215ENST00000636674 MON1BQ7L1V2 547 aa15.48■□□□□ 0.07
CLN6-215ENST00000636674 TBC1D1Q86TI0 1168 aaPredicted RBP15.48■□□□□ 0.07
CLN6-215ENST00000636674 LARGE2Q8N3Y3 721 aa15.48■□□□□ 0.07
CLN6-215ENST00000636674 SYTL5Q8TDW5 730 aaPredicted RBP15.48■□□□□ 0.07
CLN6-215ENST00000636674 GRAMD1AQ96CP6 724 aa15.48■□□□□ 0.07
CLN6-215ENST00000636674 ECT2Q9H8V3 914 aa15.48■□□□□ 0.07
CLN6-215ENST00000636674 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.48■□□□□ 0.077e-13■■■■■ 139.7
CLN6-215ENST00000636674 BAIAP2L1Q9UHR4 511 aa15.48■□□□□ 0.07
CLN6-215ENST00000636674 LOC102724159A0A0B4J2E5 919 aa15.47■□□□□ 0.07
CLN6-215ENST00000636674 TMEM150BA6NC51 233 aa15.47■□□□□ 0.07
CLN6-215ENST00000636674 H0YIN7 160 aa15.47■□□□□ 0.07
CLN6-215ENST00000636674 KRT5P13647 590 aa15.47■□□□□ 0.07
CLN6-215ENST00000636674 RRM1P23921 792 aa15.47■□□□□ 0.07
CLN6-215ENST00000636674 BPIFB4P59827 614 aa15.47■□□□□ 0.07
CLN6-215ENST00000636674 CLDN10P78369 228 aa15.47■□□□□ 0.07
CLN6-215ENST00000636674 STRN3Q13033 797 aa15.47■□□□□ 0.07
CLN6-215ENST00000636674 MPP2Q14168 576 aa15.47■□□□□ 0.07
CLN6-215ENST00000636674 PWP2Q15269 919 aaKnown RBP15.47■□□□□ 0.07
CLN6-215ENST00000636674 ZYXQ15942 572 aaKnown RBP15.47■□□□□ 0.07
CLN6-215ENST00000636674 SPDYE2Q495Y8 402 aa15.47■□□□□ 0.07
CLN6-215ENST00000636674 KATNAL2Q8IYT4 538 aa15.47■□□□□ 0.07
CLN6-215ENST00000636674 GPD1LQ8N335 351 aa15.47■□□□□ 0.07
CLN6-215ENST00000636674 SUPT20HQ8NEM7 779 aa15.47■□□□□ 0.07
CLN6-215ENST00000636674 MGARPQ8TDB4 240 aa15.47■□□□□ 0.07
CLN6-215ENST00000636674 TCP11Q8WWU5 503 aa15.47■□□□□ 0.07
CLN6-215ENST00000636674 TRIM7Q9C029 511 aa15.47■□□□□ 0.07
CLN6-215ENST00000636674 KMT5AQ9NQR1 393 aa15.47■□□□□ 0.07
CLN6-215ENST00000636674 C1orf112Q9NSG2 853 aa15.47■□□□□ 0.07
CLN6-215ENST00000636674 R3HDM2Q9Y2K5 976 aaKnown RBP15.47■□□□□ 0.07
CLN6-215ENST00000636674 NFASCO94856 1347 aa15.47■□□□□ 0.07
CLN6-215ENST00000636674 CCNE2O96020 404 aa15.46■□□□□ 0.07
CLN6-215ENST00000636674 ADCY8P40145 1251 aa15.46■□□□□ 0.07
CLN6-215ENST00000636674 RTP1P59025 263 aa15.46■□□□□ 0.07
CLN6-215ENST00000636674 TRIM72Q6ZMU5 477 aa15.46■□□□□ 0.07
CLN6-215ENST00000636674 ASRGL1Q7L266 308 aa15.46■□□□□ 0.07
CLN6-215ENST00000636674 RHOT1Q8IXI2 618 aa15.46■□□□□ 0.07
CLN6-215ENST00000636674 IFT74Q96LB3 600 aa15.46■□□□□ 0.07
CLN6-215ENST00000636674 TGS1Q96RS0 853 aaKnown RBP15.46■□□□□ 0.07
CLN6-215ENST00000636674 CCDC77Q9BR77 488 aa15.46■□□□□ 0.07
CLN6-215ENST00000636674 ARHGEF3Q9NR81 526 aa15.46■□□□□ 0.07
CLN6-215ENST00000636674 EPB41L3Q9Y2J2 1087 aaPredicted RBP15.46■□□□□ 0.07
CLN6-215ENST00000636674 CLRN2A0PK11 232 aa15.46■□□□□ 0.07
CLN6-215ENST00000636674 CLTAP09496 248 aa15.46■□□□□ 0.07
CLN6-215ENST00000636674 CETPP11597 493 aa15.46■□□□□ 0.07
CLN6-215ENST00000636674 CCNB1P14635 433 aa15.46■□□□□ 0.07
CLN6-215ENST00000636674 KLRC2P26717 231 aa15.46■□□□□ 0.07
CLN6-215ENST00000636674 NR1H3Q13133 447 aa15.46■□□□□ 0.07
CLN6-215ENST00000636674 PGM5Q15124 567 aa15.46■□□□□ 0.07
CLN6-215ENST00000636674 E2F5Q15329 346 aa15.46■□□□□ 0.07
CLN6-215ENST00000636674 MTFR1Q15390 333 aa15.46■□□□□ 0.07
CLN6-215ENST00000636674 BRDTQ58F21 947 aaPredicted RBP15.46■□□□□ 0.07
CLN6-215ENST00000636674 DALRD3Q5D0E6 543 aaKnown RBP15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms