RNA–Protein interactions for RNA: ENST00000632629.1

NPHP3-ACAD11-202, Transcript of NPHP3-ACAD11 readthrough (NMD candidate), humanhuman

APPRIS P1 TSL 2

Gene NPHP3-ACAD11, Length 695 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-ACAD11-202ENST00000632629 INSL6Q9Y581 213 aa3.91□□□□□ -1.78
NPHP3-ACAD11-202ENST00000632629 SPATA31A6Q5VVP1 1343 aa3.91□□□□□ -1.78
NPHP3-ACAD11-202ENST00000632629 IKBKBO14920 756 aa3.9□□□□□ -1.79
NPHP3-ACAD11-202ENST00000632629 LPXNO60711 386 aa3.9□□□□□ -1.79
NPHP3-ACAD11-202ENST00000632629 SPDEFO95238 335 aa3.9□□□□□ -1.79
NPHP3-ACAD11-202ENST00000632629 CKBP12277 381 aa3.9□□□□□ -1.79
NPHP3-ACAD11-202ENST00000632629 ALDH1A3P47895 512 aa3.9□□□□□ -1.79
NPHP3-ACAD11-202ENST00000632629 ELLP55199 621 aaPredicted RBP3.9□□□□□ -1.79
NPHP3-ACAD11-202ENST00000632629 ATP8B2P98198 1209 aa3.9□□□□□ -1.79
NPHP3-ACAD11-202ENST00000632629 RAB39AQ14964 217 aa3.9□□□□□ -1.79
NPHP3-ACAD11-202ENST00000632629 NOMO1Q15155 1222 aa3.9□□□□□ -1.79
NPHP3-ACAD11-202ENST00000632629 PRR16Q569H4 304 aa3.9□□□□□ -1.79
NPHP3-ACAD11-202ENST00000632629 FBXO42Q6P3S6 717 aa3.9□□□□□ -1.79
NPHP3-ACAD11-202ENST00000632629 MED25Q71SY5 747 aa3.9□□□□□ -1.79
NPHP3-ACAD11-202ENST00000632629 C9orf106Q8NAJ2 232 aa3.9□□□□□ -1.79
NPHP3-ACAD11-202ENST00000632629 CAGE1Q8TC20 777 aa3.9□□□□□ -1.79
NPHP3-ACAD11-202ENST00000632629 NEU1Q99519 415 aa3.9□□□□□ -1.79
NPHP3-ACAD11-202ENST00000632629 TESQ9UGI8 421 aaKnown RBP3.9□□□□□ -1.79
NPHP3-ACAD11-202ENST00000632629 AJAP1Q9UKB5 411 aaPredicted RBP3.9□□□□□ -1.79
NPHP3-ACAD11-202ENST00000632629 KAT6AQ92794 2004 aa3.9□□□□□ -1.79
NPHP3-ACAD11-202ENST00000632629 ALG1L2C9J202 215 aa3.89□□□□□ -1.79
NPHP3-ACAD11-202ENST00000632629 HAUS5O94927 633 aa3.89□□□□□ -1.79
NPHP3-ACAD11-202ENST00000632629 GPANK1O95872 356 aa3.89□□□□□ -1.79
NPHP3-ACAD11-202ENST00000632629 ANXA1P04083 346 aa3.89□□□□□ -1.79
NPHP3-ACAD11-202ENST00000632629 MTHFD1P11586 935 aaKnown RBP3.89□□□□□ -1.79
NPHP3-ACAD11-202ENST00000632629 GSPT1P15170 499 aaKnown RBP3.89□□□□□ -1.79
NPHP3-ACAD11-202ENST00000632629 RAP2BP61225 183 aa3.89□□□□□ -1.79
NPHP3-ACAD11-202ENST00000632629 CXADRP78310 365 aa3.89□□□□□ -1.79
NPHP3-ACAD11-202ENST00000632629 CDC42EP1Q00587 391 aa3.89□□□□□ -1.79
NPHP3-ACAD11-202ENST00000632629 OCA2Q04671 838 aa3.89□□□□□ -1.79
NPHP3-ACAD11-202ENST00000632629 NBPF8Q3BBV2 869 aa3.89□□□□□ -1.79
NPHP3-ACAD11-202ENST00000632629 INAVAQ3KP66 663 aa3.89□□□□□ -1.79
NPHP3-ACAD11-202ENST00000632629 ZNF529Q6P280 563 aa3.89□□□□□ -1.79
NPHP3-ACAD11-202ENST00000632629 REPS2Q8NFH8 660 aa3.89□□□□□ -1.79
NPHP3-ACAD11-202ENST00000632629 SCARB1Q8WTV0 552 aa3.89□□□□□ -1.79
NPHP3-ACAD11-202ENST00000632629 HDAC10Q969S8 669 aa3.89□□□□□ -1.79
NPHP3-ACAD11-202ENST00000632629 ALOXE3Q9BYJ1 711 aa3.89□□□□□ -1.79
NPHP3-ACAD11-202ENST00000632629 C11orf54Q9H0W9 315 aaPredicted RBP3.89□□□□□ -1.79
NPHP3-ACAD11-202ENST00000632629 RSAD1Q9HA92 442 aa3.89□□□□□ -1.79
NPHP3-ACAD11-202ENST00000632629 VTA1Q9NP79 307 aa3.89□□□□□ -1.79
NPHP3-ACAD11-202ENST00000632629 SLC5A4Q9NY91 659 aa3.89□□□□□ -1.79
NPHP3-ACAD11-202ENST00000632629 ANKFY1Q9P2R3 1169 aa3.89□□□□□ -1.79
NPHP3-ACAD11-202ENST00000632629 SIK3Q9Y2K2 1263 aa3.89□□□□□ -1.79
NPHP3-ACAD11-202ENST00000632629 SPEF1Q9Y4P9 236 aa3.89□□□□□ -1.79
NPHP3-ACAD11-202ENST00000632629 EPN1Q9Y6I3 576 aaPredicted RBP3.89□□□□□ -1.79
NPHP3-ACAD11-202ENST00000632629 PNPLA7Q6ZV29 1317 aa3.89□□□□□ -1.79
NPHP3-ACAD11-202ENST00000632629 COL11A2P13942 1736 aaPredicted RBP3.88□□□□□ -1.79
NPHP3-ACAD11-202ENST00000632629 CCDC151A5D8V7 595 aa3.88□□□□□ -1.79
NPHP3-ACAD11-202ENST00000632629 ORC4O43929 436 aa3.88□□□□□ -1.79
NPHP3-ACAD11-202ENST00000632629 OSMP13725 252 aa3.88□□□□□ -1.79
NPHP3-ACAD11-202ENST00000632629 POU3F3P20264 500 aaPredicted RBP3.88□□□□□ -1.79
NPHP3-ACAD11-202ENST00000632629 DDCP20711 480 aa3.88□□□□□ -1.79
NPHP3-ACAD11-202ENST00000632629 FGFR4P22455 802 aa3.88□□□□□ -1.79
NPHP3-ACAD11-202ENST00000632629 CANXP27824 592 aaKnown RBP3.88□□□□□ -1.79
NPHP3-ACAD11-202ENST00000632629 SLC6A9P48067 706 aa3.88□□□□□ -1.79
NPHP3-ACAD11-202ENST00000632629 VAV2P52735 878 aa3.88□□□□□ -1.79
NPHP3-ACAD11-202ENST00000632629 CCT2P78371 535 aaKnown RBP3.88□□□□□ -1.79
NPHP3-ACAD11-202ENST00000632629 CREMQ03060 361 aa3.88□□□□□ -1.79
NPHP3-ACAD11-202ENST00000632629 MAPK7Q13164 816 aa3.88□□□□□ -1.79
NPHP3-ACAD11-202ENST00000632629 TP53BP2Q13625 1128 aa3.88□□□□□ -1.79
NPHP3-ACAD11-202ENST00000632629 SEPT2Q15019 361 aa3.88□□□□□ -1.79
NPHP3-ACAD11-202ENST00000632629 TSHZ3Q63HK5 1081 aa3.88□□□□□ -1.79
NPHP3-ACAD11-202ENST00000632629 B3GNTL1Q67FW5 361 aaPredicted RBP3.88□□□□□ -1.79
NPHP3-ACAD11-202ENST00000632629 SP5Q6BEB4 398 aaPredicted RBP3.88□□□□□ -1.79
NPHP3-ACAD11-202ENST00000632629 CMTR2Q8IYT2 770 aaKnown RBP3.88□□□□□ -1.79
NPHP3-ACAD11-202ENST00000632629 LNX2Q8N448 690 aa3.88□□□□□ -1.79
NPHP3-ACAD11-202ENST00000632629 AOPEPQ8N6M6 819 aa3.88□□□□□ -1.79
NPHP3-ACAD11-202ENST00000632629 CNTD1Q8N815 330 aa3.88□□□□□ -1.79
NPHP3-ACAD11-202ENST00000632629 ASB10Q8WXI3 467 aa3.88□□□□□ -1.79
NPHP3-ACAD11-202ENST00000632629 DMRT3Q9NQL9 472 aa3.88□□□□□ -1.79
NPHP3-ACAD11-202ENST00000632629 MAN1C1Q9NR34 630 aa3.88□□□□□ -1.79
NPHP3-ACAD11-202ENST00000632629 CALCOCO1Q9P1Z2 691 aa3.88□□□□□ -1.79
NPHP3-ACAD11-202ENST00000632629 RNF7Q9UBF6 113 aa3.88□□□□□ -1.79
NPHP3-ACAD11-202ENST00000632629 NIPSNAP3AQ9UFN0 247 aaPredicted RBP3.88□□□□□ -1.79
NPHP3-ACAD11-202ENST00000632629 ATP8A1Q9Y2Q0 1164 aa3.88□□□□□ -1.79
NPHP3-ACAD11-202ENST00000632629 PCDHGA2Q9Y5H1 932 aa3.88□□□□□ -1.79
NPHP3-ACAD11-202ENST00000632629 MRFAP1Q9Y605 127 aa3.88□□□□□ -1.79
NPHP3-ACAD11-202ENST00000632629 A0A1W2PS29 197 aa3.87□□□□□ -1.79
NPHP3-ACAD11-202ENST00000632629 E7ENX8 843 aa3.87□□□□□ -1.79
NPHP3-ACAD11-202ENST00000632629 PROP1O75360 226 aa3.87□□□□□ -1.79
NPHP3-ACAD11-202ENST00000632629 ELANEP08246 267 aa3.87□□□□□ -1.79
NPHP3-ACAD11-202ENST00000632629 ITGAMP11215 1152 aa3.87□□□□□ -1.79
NPHP3-ACAD11-202ENST00000632629 PCSK1P29120 753 aa3.87□□□□□ -1.79
NPHP3-ACAD11-202ENST00000632629 CXCR5P32302 372 aa3.87□□□□□ -1.79
NPHP3-ACAD11-202ENST00000632629 TAP2Q03519 686 aa3.87□□□□□ -1.79
NPHP3-ACAD11-202ENST00000632629 SCAPQ12770 1279 aa3.87□□□□□ -1.79
NPHP3-ACAD11-202ENST00000632629 GPR162Q16538 588 aa3.87□□□□□ -1.79
NPHP3-ACAD11-202ENST00000632629 PABPC1LQ4VXU2 614 aaKnown RBP3.87□□□□□ -1.79
NPHP3-ACAD11-202ENST00000632629 SYDE2Q5VT97 1194 aa3.87□□□□□ -1.79
NPHP3-ACAD11-202ENST00000632629 Q6ZNX1 250 aa3.87□□□□□ -1.79
NPHP3-ACAD11-202ENST00000632629 LHFPL2Q6ZUX7 228 aa3.87□□□□□ -1.79
NPHP3-ACAD11-202ENST00000632629 CMIPQ8IY22 773 aa3.87□□□□□ -1.79
NPHP3-ACAD11-202ENST00000632629 C1orf162Q8NEQ5 155 aaPredicted RBP3.87□□□□□ -1.79
NPHP3-ACAD11-202ENST00000632629 HEPHQ9BQS7 1158 aa3.87□□□□□ -1.79
NPHP3-ACAD11-202ENST00000632629 DUSP26Q9BV47 211 aa3.87□□□□□ -1.79
NPHP3-ACAD11-202ENST00000632629 SLC13A1Q9BZW2 595 aa3.87□□□□□ -1.79
NPHP3-ACAD11-202ENST00000632629 RLIMQ9NVW2 624 aa3.87□□□□□ -1.79
NPHP3-ACAD11-202ENST00000632629 MKS1Q9NXB0 559 aa3.87□□□□□ -1.79
NPHP3-ACAD11-202ENST00000632629 SLC23A1Q9UHI7 598 aa3.87□□□□□ -1.79
NPHP3-ACAD11-202ENST00000632629 DNM3Q9UQ16 869 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms