RNA–Protein interactions for RNA: ENST00000628857.1

CNOT1-223, Transcript of CCR4-NOT transcription complex subunit 1, human

TSL 5 BASIC

Gene CNOT1, Length 291 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNOT1-223	ENST00000628857	SLC43A1	O75387	559 aa		3.98	□□□□□ -1.77
CNOT1-223	ENST00000628857	RPS6KA4	O75676	772 aa		3.98	□□□□□ -1.77
CNOT1-223	ENST00000628857	IL12RB1	P42701	662 aa		3.98	□□□□□ -1.77
CNOT1-223	ENST00000628857	TTF1	Q15361	905 aa	Predicted RBP	3.98	□□□□□ -1.77
CNOT1-223	ENST00000628857	C3orf36	Q3SXR2	165 aa		3.98	□□□□□ -1.77
CNOT1-223	ENST00000628857	TIGD2	Q4W5G0	525 aa		3.98	□□□□□ -1.77
CNOT1-223	ENST00000628857	PDCD4	Q53EL6	469 aa	Known RBP	3.98	□□□□□ -1.77
CNOT1-223	ENST00000628857	ZNF529	Q6P280	563 aa		3.98	□□□□□ -1.77
CNOT1-223	ENST00000628857	MED25	Q71SY5	747 aa		3.98	□□□□□ -1.77
CNOT1-223	ENST00000628857	PDSS2	Q86YH6	399 aa		3.98	□□□□□ -1.77
CNOT1-223	ENST00000628857	CLPTM1L	Q96KA5	538 aa		3.98	□□□□□ -1.77
CNOT1-223	ENST00000628857	PNKP	Q96T60	521 aa		3.98	□□□□□ -1.77
CNOT1-223	ENST00000628857	NRDE2	Q9H7Z3	1164 aa		3.98	□□□□□ -1.77
CNOT1-223	ENST00000628857	MMRN2	Q9H8L6	949 aa		3.98	□□□□□ -1.77
CNOT1-223	ENST00000628857	SLC2A4RG	Q9NR83	387 aa		3.98	□□□□□ -1.77
CNOT1-223	ENST00000628857	GNL3L	Q9NVN8	582 aa	Known RBP	3.98	□□□□□ -1.77
CNOT1-223	ENST00000628857	RLIM	Q9NVW2	624 aa		3.98	□□□□□ -1.77
CNOT1-223	ENST00000628857	JKAMP	Q9P055	326 aa		3.98	□□□□□ -1.77
CNOT1-223	ENST00000628857	SERPINB13	Q9UIV8	391 aa		3.98	□□□□□ -1.77
CNOT1-223	ENST00000628857	LUC7L2	Q9Y383	392 aa	Known RBP	3.98	□□□□□ -1.77
CNOT1-223	ENST00000628857	NEU2	Q9Y3R4	380 aa		3.98	□□□□□ -1.77
CNOT1-223	ENST00000628857	HS3ST3A1	Q9Y663	406 aa		3.98	□□□□□ -1.77
CNOT1-223	ENST00000628857	COL4A3	Q01955	1670 aa		3.97	□□□□□ -1.77
CNOT1-223	ENST00000628857		A0A1B0GTW7	788 aa		3.97	□□□□□ -1.77
CNOT1-223	ENST00000628857	ZNF185	O15231	689 aa		3.97	□□□□□ -1.77
CNOT1-223	ENST00000628857	HAUS5	O94927	633 aa		3.97	□□□□□ -1.77
CNOT1-223	ENST00000628857	ABHD16A	O95870	558 aa		3.97	□□□□□ -1.77
CNOT1-223	ENST00000628857	FSHB	P01225	129 aa		3.97	□□□□□ -1.77
CNOT1-223	ENST00000628857	RNASE9	P60153	205 aa	Known RBP	3.97	□□□□□ -1.77
CNOT1-223	ENST00000628857	GTF2H3	Q13889	308 aa		3.97	□□□□□ -1.77
CNOT1-223	ENST00000628857	PTPA	Q15257	358 aa		3.97	□□□□□ -1.77
CNOT1-223	ENST00000628857	UAP1L1	Q3KQV9	507 aa		3.97	□□□□□ -1.77
CNOT1-223	ENST00000628857	ATAT1	Q5SQI0	421 aa		3.97	□□□□□ -1.77
CNOT1-223	ENST00000628857	ABHD17B	Q5VST6	288 aa		3.97	□□□□□ -1.77
CNOT1-223	ENST00000628857	ANKRD13A	Q8IZ07	590 aa		3.97	□□□□□ -1.77
CNOT1-223	ENST00000628857	TMEM132C	Q8N3T6	1108 aa		3.97	□□□□□ -1.77
CNOT1-223	ENST00000628857	DCBLD1	Q8N8Z6	715 aa		3.97	□□□□□ -1.77
CNOT1-223	ENST00000628857	RNF169	Q8NCN4	708 aa		3.97	□□□□□ -1.77
CNOT1-223	ENST00000628857	C3orf20	Q8ND61	904 aa		3.97	□□□□□ -1.77
CNOT1-223	ENST00000628857	OR56A1	Q8NGH5	318 aa		3.97	□□□□□ -1.77
CNOT1-223	ENST00000628857	HOOK2	Q96ED9	719 aa		3.97	□□□□□ -1.77
CNOT1-223	ENST00000628857	TMX3	Q96JJ7	454 aa		3.97	□□□□□ -1.77
CNOT1-223	ENST00000628857	PKNOX2	Q96KN3	472 aa		3.97	□□□□□ -1.77
CNOT1-223	ENST00000628857	COQ10A	Q96MF6	247 aa		3.97	□□□□□ -1.77
CNOT1-223	ENST00000628857	AIFM3	Q96NN9	605 aa		3.97	□□□□□ -1.77
CNOT1-223	ENST00000628857	NEU1	Q99519	415 aa		3.97	□□□□□ -1.77
CNOT1-223	ENST00000628857	SMAD5	Q99717	465 aa	Known RBP	3.97	□□□□□ -1.77
CNOT1-223	ENST00000628857	GSTO2	Q9H4Y5	243 aa		3.97	□□□□□ -1.77
CNOT1-223	ENST00000628857	LDAH	Q9H6V9	325 aa		3.97	□□□□□ -1.77
CNOT1-223	ENST00000628857	FBXO34	Q9NWN3	711 aa		3.97	□□□□□ -1.77
CNOT1-223	ENST00000628857	KCNE5	Q9UJ90	142 aa		3.97	□□□□□ -1.77
CNOT1-223	ENST00000628857	USP15	Q9Y4E8	981 aa	Predicted RBP	3.97	□□□□□ -1.77
CNOT1-223	ENST00000628857	GRM6	O15303	877 aa		3.96	□□□□□ -1.78
CNOT1-223	ENST00000628857	RHOBTB3	O94955	611 aa		3.96	□□□□□ -1.78
CNOT1-223	ENST00000628857	MAL	P21145	153 aa		3.96	□□□□□ -1.78
CNOT1-223	ENST00000628857	TGM1	P22735	817 aa		3.96	□□□□□ -1.78
CNOT1-223	ENST00000628857	ZFP36	P26651	326 aa	Known RBP	3.96	□□□□□ -1.78
CNOT1-223	ENST00000628857	HK3	P52790	923 aa		3.96	□□□□□ -1.78
CNOT1-223	ENST00000628857	INHBC	P55103	352 aa		3.96	□□□□□ -1.78
CNOT1-223	ENST00000628857	RAP2B	P61225	183 aa		3.96	□□□□□ -1.78
CNOT1-223	ENST00000628857	TGFB2	P61812	414 aa		3.96	□□□□□ -1.78
CNOT1-223	ENST00000628857	FAM189B	P81408	668 aa		3.96	□□□□□ -1.78
CNOT1-223	ENST00000628857	PIN1	Q13526	163 aa	Predicted RBP	3.96	□□□□□ -1.78
CNOT1-223	ENST00000628857	IL10RA	Q13651	578 aa		3.96	□□□□□ -1.78
CNOT1-223	ENST00000628857	SPDYE7P	Q495Y7	208 aa		3.96	□□□□□ -1.78
CNOT1-223	ENST00000628857	TSHZ3	Q63HK5	1081 aa		3.96	□□□□□ -1.78
CNOT1-223	ENST00000628857	IGFL4	Q6B9Z1	124 aa		3.96	□□□□□ -1.78
CNOT1-223	ENST00000628857	GADL1	Q6ZQY3	521 aa		3.96	□□□□□ -1.78
CNOT1-223	ENST00000628857	MAPKAPK5	Q8IW41	473 aa		3.96	□□□□□ -1.78
CNOT1-223	ENST00000628857	AOPEP	Q8N6M6	819 aa		3.96	□□□□□ -1.78
CNOT1-223	ENST00000628857	LARP4B	Q92615	738 aa	Known RBP	3.96	□□□□□ -1.78
CNOT1-223	ENST00000628857	CLIP3	Q96DZ5	547 aa		3.96	□□□□□ -1.78
CNOT1-223	ENST00000628857	C1GALT1C1	Q96EU7	318 aa		3.96	□□□□□ -1.78
CNOT1-223	ENST00000628857	MYOC	Q99972	504 aa		3.96	□□□□□ -1.78
CNOT1-223	ENST00000628857	CDH19	Q9H159	772 aa		3.96	□□□□□ -1.78
CNOT1-223	ENST00000628857	ZNF768	Q9H5H4	540 aa	Known RBP	3.96	□□□□□ -1.78
CNOT1-223	ENST00000628857	WDCP	Q9H6R7	721 aa		3.96	□□□□□ -1.78
CNOT1-223	ENST00000628857	KMT5A	Q9NQR1	393 aa		3.96	□□□□□ -1.78
CNOT1-223	ENST00000628857	AASDHPPT	Q9NRN7	309 aa		3.96	□□□□□ -1.78
CNOT1-223	ENST00000628857	REXO2	Q9Y3B8	237 aa	Known RBP	3.96	□□□□□ -1.78
CNOT1-223	ENST00000628857	CENPVL1	A0A0U1RR11	272 aa		3.95	□□□□□ -1.78
CNOT1-223	ENST00000628857	PIPSL	A2A3N6	862 aa		3.95	□□□□□ -1.78
CNOT1-223	ENST00000628857	NT5C1B-RDH14	C9J2C7	533 aa		3.95	□□□□□ -1.78
CNOT1-223	ENST00000628857		E7ENX8	843 aa		3.95	□□□□□ -1.78
CNOT1-223	ENST00000628857	FOXN1	O15353	648 aa		3.95	□□□□□ -1.78
CNOT1-223	ENST00000628857	AKAP10	O43572	662 aa		3.95	□□□□□ -1.78
CNOT1-223	ENST00000628857	ERN1	O75460	977 aa	Known RBP	3.95	□□□□□ -1.78
CNOT1-223	ENST00000628857	NCR1	O76036	304 aa		3.95	□□□□□ -1.78
CNOT1-223	ENST00000628857	IL33	O95760	270 aa		3.95	□□□□□ -1.78
CNOT1-223	ENST00000628857	FOS	P01100	380 aa	Predicted RBP	3.95	□□□□□ -1.78
CNOT1-223	ENST00000628857	ELANE	P08246	267 aa		3.95	□□□□□ -1.78
CNOT1-223	ENST00000628857	DDX6	P26196	483 aa	Known RBP eCLIP	3.95	□□□□□ -1.78
CNOT1-223	ENST00000628857	PTTG1IP	P53801	180 aa		3.95	□□□□□ -1.78
CNOT1-223	ENST00000628857	POU6F2	P78424	691 aa	Predicted RBP	3.95	□□□□□ -1.78
CNOT1-223	ENST00000628857	GUCY1B3	Q02153	619 aa		3.95	□□□□□ -1.78
CNOT1-223	ENST00000628857	TAP2	Q03519	686 aa		3.95	□□□□□ -1.78
CNOT1-223	ENST00000628857	TCF15	Q12870	199 aa		3.95	□□□□□ -1.78
CNOT1-223	ENST00000628857	FHL2	Q14192	279 aa		3.95	□□□□□ -1.78
CNOT1-223	ENST00000628857	PGS1	Q32NB8	556 aa		3.95	□□□□□ -1.78
CNOT1-223	ENST00000628857	KHDC1	Q4VXA5	237 aa	Known RBP	3.95	□□□□□ -1.78

Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms