RNA–Protein interactions for RNA: ENST00000625842.2

VPS8-227, Transcript of VPS8, CORVET complex subunit, humanhuman

APPRIS P4 TSL 5 BASIC

Gene VPS8, Length 4,969 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-227ENST00000625842 PCBP1Q15365 356 aaKnown RBP eCLIP11.7□□□□□ -0.54
VPS8-227ENST00000625842 P3H1Q32P28 736 aa11.7□□□□□ -0.54
VPS8-227ENST00000625842 PHACTR4Q8IZ21 702 aa11.7□□□□□ -0.54
VPS8-227ENST00000625842 DEFB118Q96PH6 123 aa11.7□□□□□ -0.54
VPS8-227ENST00000625842 CINPQ9BW66 212 aaPredicted RBP11.7□□□□□ -0.54
VPS8-227ENST00000625842 COPS7BQ9H9Q2 264 aaPredicted RBP11.7□□□□□ -0.54
VPS8-227ENST00000625842 CASS4Q9NQ75 786 aa11.7□□□□□ -0.54
VPS8-227ENST00000625842 MRPS23Q9Y3D9 190 aaKnown RBP11.7□□□□□ -0.54
VPS8-227ENST00000625842 PLA2R1Q13018 1463 aa11.7□□□□□ -0.54
VPS8-227ENST00000625842 TARSL2A2RTX5 802 aaKnown RBP11.7□□□□□ -0.54
VPS8-227ENST00000625842 HIP1RO75146 1068 aa11.7□□□□□ -0.54
VPS8-227ENST00000625842 FBXO21O94952 628 aa11.7□□□□□ -0.54
VPS8-227ENST00000625842 RTN3O95197 1032 aaPredicted RBP11.7□□□□□ -0.54
VPS8-227ENST00000625842 PCDH8O95206 1070 aa11.7□□□□□ -0.54
VPS8-227ENST00000625842 CTNNA1P35221 906 aaKnown RBP11.7□□□□□ -0.54
VPS8-227ENST00000625842 HALP42357 657 aa11.7□□□□□ -0.54
VPS8-227ENST00000625842 RPS6P62753 249 aaKnown RBP11.7□□□□□ -0.54
VPS8-227ENST00000625842 ERVK-9P63128 1117 aa11.7□□□□□ -0.54
VPS8-227ENST00000625842 ERVK-24P63145 666 aa11.7□□□□□ -0.54
VPS8-227ENST00000625842 ZBED6P86452 979 aa11.7□□□□□ -0.54
VPS8-227ENST00000625842 NBPF12Q5TAG4 269 aaPredicted RBP11.7□□□□□ -0.54
VPS8-227ENST00000625842 SLC39A10Q9ULF5 831 aa11.7□□□□□ -0.54
VPS8-227ENST00000625842 PCDHA5Q9Y5H7 936 aa11.7□□□□□ -0.54
VPS8-227ENST00000625842 PRR23AA6NEV1 266 aa11.69□□□□□ -0.54
VPS8-227ENST00000625842 SPDYE5A6NIY4 337 aa11.69□□□□□ -0.54
VPS8-227ENST00000625842 PSMD12O00232 456 aaPredicted RBP11.69□□□□□ -0.54
VPS8-227ENST00000625842 DEUP1Q05D60 604 aa11.69□□□□□ -0.54
VPS8-227ENST00000625842 ILF2Q12905 390 aaKnown RBP11.69□□□□□ -0.54
VPS8-227ENST00000625842 ACVR2BQ13705 512 aa11.69□□□□□ -0.54
VPS8-227ENST00000625842 PLCL1Q15111 1095 aa11.69□□□□□ -0.54
VPS8-227ENST00000625842 KIZQ2M2Z5 673 aa11.69□□□□□ -0.54
VPS8-227ENST00000625842 SPDYE7PQ495Y7 208 aa11.69□□□□□ -0.54
VPS8-227ENST00000625842 ZNF668Q96K58 619 aaPredicted RBP11.69□□□□□ -0.54
VPS8-227ENST00000625842 ZFP42Q96MM3 310 aa11.69□□□□□ -0.54
VPS8-227ENST00000625842 ATXN3LQ9H3M9 355 aa11.69□□□□□ -0.54
VPS8-227ENST00000625842 TLR8Q9NR97 1041 aaKnown RBP11.69□□□□□ -0.54
VPS8-227ENST00000625842 CHCHD3Q9NX63 227 aaKnown RBP11.69□□□□□ -0.54
VPS8-227ENST00000625842 NRBP1Q9UHY1 535 aa11.69□□□□□ -0.54
VPS8-227ENST00000625842 IFRD1O00458 451 aaPredicted RBP11.69□□□□□ -0.54
VPS8-227ENST00000625842 SRGAP2O75044 1071 aa11.69□□□□□ -0.54
VPS8-227ENST00000625842 DSG3P32926 999 aa11.69□□□□□ -0.54
VPS8-227ENST00000625842 MED21Q13503 144 aa11.69□□□□□ -0.54
VPS8-227ENST00000625842 MFSD10Q14728 455 aa11.69□□□□□ -0.54
VPS8-227ENST00000625842 CCDC38Q502W7 563 aa11.69□□□□□ -0.54
VPS8-227ENST00000625842 UGT3A1Q6NUS8 523 aa11.69□□□□□ -0.54
VPS8-227ENST00000625842 ENAHQ8N8S7 591 aaPredicted RBP11.69□□□□□ -0.54
VPS8-227ENST00000625842 LATS2Q9NRM7 1088 aa11.69□□□□□ -0.54
VPS8-227ENST00000625842 PARVAQ9NVD7 372 aa11.69□□□□□ -0.54
VPS8-227ENST00000625842 PDS5AQ29RF7 1337 aaKnown RBP11.69□□□□□ -0.54
VPS8-227ENST00000625842 GOLGA8TH3BQL2 631 aa11.69□□□□□ -0.54
VPS8-227ENST00000625842 PGRMC1O00264 195 aaKnown RBP11.69□□□□□ -0.54
VPS8-227ENST00000625842 PLS3P13797 630 aa11.69□□□□□ -0.54
VPS8-227ENST00000625842 PTPN3P26045 913 aa11.69□□□□□ -0.54
VPS8-227ENST00000625842 GCLMP48507 274 aa11.69□□□□□ -0.54
VPS8-227ENST00000625842 PSEN2P49810 448 aa11.69□□□□□ -0.54
VPS8-227ENST00000625842 KRT222Q8N1A0 295 aa11.69□□□□□ -0.54
VPS8-227ENST00000625842 ARMC2Q8NEN0 867 aa11.69□□□□□ -0.54
VPS8-227ENST00000625842 EPN1Q9Y6I3 576 aaPredicted RBP11.69□□□□□ -0.54
VPS8-227ENST00000625842 FAM47DPA6NHR8 397 aa11.69□□□□□ -0.54
VPS8-227ENST00000625842 MEI4A8MW99 385 aa11.69□□□□□ -0.54
VPS8-227ENST00000625842 IGKV5-2P06315 115 aa11.69□□□□□ -0.54
VPS8-227ENST00000625842 CCT5P48643 541 aa11.69□□□□□ -0.54
VPS8-227ENST00000625842 RENBPP51606 427 aa11.69□□□□□ -0.54
VPS8-227ENST00000625842 SCRN1Q12765 414 aa11.69□□□□□ -0.54
VPS8-227ENST00000625842 TRADDQ15628 312 aa11.69□□□□□ -0.54
VPS8-227ENST00000625842 TSNAXIP1Q2TAA8 658 aa11.69□□□□□ -0.54
VPS8-227ENST00000625842 CTU1Q7Z7A3 348 aaKnown RBP11.69□□□□□ -0.54
VPS8-227ENST00000625842 PYROXD1Q8WU10 500 aa11.69□□□□□ -0.54
VPS8-227ENST00000625842 MRPL40Q9NQ50 206 aaKnown RBP11.69□□□□□ -0.54
VPS8-227ENST00000625842 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.69□□□□□ -0.54
VPS8-227ENST00000625842 RIMBP3CA6NJZ7 1639 aa11.68□□□□□ -0.54
VPS8-227ENST00000625842 RIMBP3BA6NNM3 1639 aa11.68□□□□□ -0.54
VPS8-227ENST00000625842 RIMBP3Q9UFD9 1639 aa11.68□□□□□ -0.54
VPS8-227ENST00000625842 RPN2P04844 631 aa11.68□□□□□ -0.54
VPS8-227ENST00000625842 DNAJB2P25686 324 aa11.68□□□□□ -0.54
VPS8-227ENST00000625842 ADORA2AP29274 412 aa11.68□□□□□ -0.54
VPS8-227ENST00000625842 GPC5P78333 572 aa11.68□□□□□ -0.54
VPS8-227ENST00000625842 GIT2Q14161 759 aa11.68□□□□□ -0.54
VPS8-227ENST00000625842 TEAD4Q15561 434 aa11.68□□□□□ -0.54
VPS8-227ENST00000625842 BBS9Q3SYG4 887 aa11.68□□□□□ -0.54
VPS8-227ENST00000625842 EPHA10Q5JZY3 1008 aa11.68□□□□□ -0.54
VPS8-227ENST00000625842 ZNF410Q86VK4 478 aa11.68□□□□□ -0.54
VPS8-227ENST00000625842 SPIRE2Q8WWL2 714 aa11.68□□□□□ -0.54
VPS8-227ENST00000625842 TMEM143Q96AN5 459 aa11.68□□□□□ -0.54
VPS8-227ENST00000625842 PRMT6Q96LA8 375 aaPredicted RBP11.68□□□□□ -0.54
VPS8-227ENST00000625842 NDST4Q9H3R1 872 aa11.68□□□□□ -0.54
VPS8-227ENST00000625842 PKD2L2Q9NZM6 624 aa11.68□□□□□ -0.54
VPS8-227ENST00000625842 CRLS1Q9UJA2 301 aa11.68□□□□□ -0.54
VPS8-227ENST00000625842 CCDC189A1A4V9 331 aa11.68□□□□□ -0.54
VPS8-227ENST00000625842 LAG3P18627 525 aa11.68□□□□□ -0.54
VPS8-227ENST00000625842 TAB3Q8N5C8 712 aaPredicted RBP11.68□□□□□ -0.54
VPS8-227ENST00000625842 DACT3Q96B18 629 aaPredicted RBP11.68□□□□□ -0.54
VPS8-227ENST00000625842 UROC1Q96N76 676 aa11.68□□□□□ -0.54
VPS8-227ENST00000625842 TLE6Q9H808 572 aa11.68□□□□□ -0.54
VPS8-227ENST00000625842 SAE1Q9UBE0 346 aaPredicted RBP11.68□□□□□ -0.54
VPS8-227ENST00000625842 USP18Q9UMW8 372 aa11.68□□□□□ -0.54
VPS8-227ENST00000625842 PCDHA7Q9UN72 937 aa11.68□□□□□ -0.54
VPS8-227ENST00000625842 PREX2Q70Z35 1606 aa11.68□□□□□ -0.54
VPS8-227ENST00000625842 PRDM15P57071 1507 aaPredicted RBP11.68□□□□□ -0.54
VPS8-227ENST00000625842 CAV1Q03135 178 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms