RNA–Protein interactions for RNA: ENST00000625244.2

SNX1-214, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-214ENST00000625244 CREB5Q02930 508 aa15.42■□□□□ 0.06
SNX1-214ENST00000625244 MBTD1Q05BQ5 628 aa15.42■□□□□ 0.06
SNX1-214ENST00000625244 SYNPOQ8N3V7 929 aa15.42■□□□□ 0.06
SNX1-214ENST00000625244 DEFB124Q8NES8 71 aa15.42■□□□□ 0.06
SNX1-214ENST00000625244 WRAP73Q9P2S5 460 aaPredicted RBP15.42■□□□□ 0.06
SNX1-214ENST00000625244 BACE2Q9Y5Z0 518 aa15.42■□□□□ 0.06
SNX1-214ENST00000625244 EML1O00423 815 aa15.41■□□□□ 0.06
SNX1-214ENST00000625244 PRRG1O14668 218 aa15.41■□□□□ 0.06
SNX1-214ENST00000625244 CHADO15335 359 aa15.41■□□□□ 0.06
SNX1-214ENST00000625244 RFC5P40937 340 aa15.41■□□□□ 0.06
SNX1-214ENST00000625244 USP11P51784 963 aa15.41■□□□□ 0.06
SNX1-214ENST00000625244 EMC2Q15006 297 aa15.41■□□□□ 0.06
SNX1-214ENST00000625244 NAB2Q15742 525 aa15.41■□□□□ 0.06
SNX1-214ENST00000625244 COL28A1Q2UY09 1125 aa15.41■□□□□ 0.06
SNX1-214ENST00000625244 RALGPS2Q86X27 583 aaPredicted RBP15.41■□□□□ 0.06
SNX1-214ENST00000625244 YAF2Q8IY57 180 aa15.41■□□□□ 0.06
SNX1-214ENST00000625244 TMEM9BQ9NQ34 198 aa15.41■□□□□ 0.06
SNX1-214ENST00000625244 POLR3BQ9NW08 1133 aaPredicted RBP15.41■□□□□ 0.06
SNX1-214ENST00000625244 SNTG2Q9NY99 539 aa15.41■□□□□ 0.06
SNX1-214ENST00000625244 GTSE1Q9NYZ3 720 aa15.41■□□□□ 0.06
SNX1-214ENST00000625244 ANKFY1Q9P2R3 1169 aa15.41■□□□□ 0.06
SNX1-214ENST00000625244 ASXL3Q9C0F0 2248 aa15.41■□□□□ 0.06
SNX1-214ENST00000625244 ASCC3Q8N3C0 2202 aaKnown RBP15.4■□□□□ 0.06
SNX1-214ENST00000625244 BCLAF3A2AJT9 711 aaKnown RBP15.4■□□□□ 0.06
SNX1-214ENST00000625244 DCLK1O15075 740 aa15.4■□□□□ 0.06
SNX1-214ENST00000625244 ZBTB43O43298 467 aa15.4■□□□□ 0.06
SNX1-214ENST00000625244 ABLIM3O94929 683 aa15.4■□□□□ 0.06
SNX1-214ENST00000625244 SEC24AO95486 1093 aa15.4■□□□□ 0.06
SNX1-214ENST00000625244 TKTP29401 623 aaKnown RBP15.4■□□□□ 0.06
SNX1-214ENST00000625244 ELF1P32519 619 aa15.4■□□□□ 0.06
SNX1-214ENST00000625244 QARSP47897 775 aaKnown RBP15.4■□□□□ 0.06
SNX1-214ENST00000625244 ROR1Q01973 937 aa15.4■□□□□ 0.06
SNX1-214ENST00000625244 FCHO2Q0JRZ9 810 aa15.4■□□□□ 0.06
SNX1-214ENST00000625244 Q4G0T1 1027 aa15.4■□□□□ 0.06
SNX1-214ENST00000625244 CYP4A22Q5TCH4 519 aa15.4■□□□□ 0.06
SNX1-214ENST00000625244 SLC27A1Q6PCB7 646 aa15.4■□□□□ 0.06
SNX1-214ENST00000625244 GPIHBP1Q8IV16 184 aa15.4■□□□□ 0.06
SNX1-214ENST00000625244 EXOC8Q8IYI6 725 aa15.4■□□□□ 0.06
SNX1-214ENST00000625244 ZNF461Q8TAF7 563 aa15.4■□□□□ 0.06
SNX1-214ENST00000625244 FAM200AQ8TCP9 573 aa15.4■□□□□ 0.06
SNX1-214ENST00000625244 TCP11Q8WWU5 503 aa15.4■□□□□ 0.06
SNX1-214ENST00000625244 DDX27Q96GQ7 796 aaKnown RBP15.4■□□□□ 0.06
SNX1-214ENST00000625244 ZFYVE19Q96K21 471 aa15.4■□□□□ 0.06
SNX1-214ENST00000625244 CYP4F11Q9HBI6 524 aa15.4■□□□□ 0.06
SNX1-214ENST00000625244 PDCD11Q14690 1871 aaKnown RBP15.4■□□□□ 0.06
SNX1-214ENST00000625244 CFAP46Q8IYW2 2715 aa15.39■□□□□ 0.05
SNX1-214ENST00000625244 A0A1B0GUA9 196 aa15.39■□□□□ 0.05
SNX1-214ENST00000625244 CYSRT1A8MQ03 144 aa15.39■□□□□ 0.05
SNX1-214ENST00000625244 I3L4J1 428 aa15.39■□□□□ 0.05
SNX1-214ENST00000625244 TDP2O95551 362 aa15.39■□□□□ 0.05
SNX1-214ENST00000625244 IGHDP01880 384 aa15.39■□□□□ 0.05
SNX1-214ENST00000625244 THP07101 528 aa15.39■□□□□ 0.05
SNX1-214ENST00000625244 GNA11P29992 359 aa15.39■□□□□ 0.05
SNX1-214ENST00000625244 FGD1P98174 961 aa15.39■□□□□ 0.05
SNX1-214ENST00000625244 TEAD2Q15562 447 aa15.39■□□□□ 0.05
SNX1-214ENST00000625244 UAP1L1Q3KQV9 507 aa15.39■□□□□ 0.05
SNX1-214ENST00000625244 CD300LGQ6UXG3 332 aa15.39■□□□□ 0.05
SNX1-214ENST00000625244 ANKS3Q6ZW76 656 aa15.39■□□□□ 0.05
SNX1-214ENST00000625244 IFNLR1Q8IU57 520 aaPredicted RBP15.39■□□□□ 0.05
SNX1-214ENST00000625244 TCEAL8Q8IYN2 117 aa15.39■□□□□ 0.05
SNX1-214ENST00000625244 LRRC3BQ96PB8 259 aa15.39■□□□□ 0.05
SNX1-214ENST00000625244 SLC8A2Q9UPR5 921 aa15.39■□□□□ 0.05
SNX1-214ENST00000625244 PPME1Q9Y570 386 aa15.39■□□□□ 0.05
SNX1-214ENST00000625244 INSL5Q9Y5Q6 135 aa15.39■□□□□ 0.05
SNX1-214ENST00000625244 PCNX2A6NKB5 2137 aa15.38■□□□□ 0.05
SNX1-214ENST00000625244 EML5Q05BV3 1969 aa15.38■□□□□ 0.05
SNX1-214ENST00000625244 ACACAQ13085 2346 aa15.38■□□□□ 0.05
SNX1-214ENST00000625244 GOLGA8AA7E2F4 631 aa15.38■□□□□ 0.05
SNX1-214ENST00000625244 GOLGA8BA8MQT2 603 aa15.38■□□□□ 0.05
SNX1-214ENST00000625244 SLC27A2O14975 620 aa15.38■□□□□ 0.05
SNX1-214ENST00000625244 NEFLP07196 543 aa15.38■□□□□ 0.05
SNX1-214ENST00000625244 MYL4P12829 197 aa15.38■□□□□ 0.05
SNX1-214ENST00000625244 ATF2P15336 505 aa15.38■□□□□ 0.05
SNX1-214ENST00000625244 ADD1P35611 737 aaKnown RBP15.38■□□□□ 0.05
SNX1-214ENST00000625244 ELF2Q15723 593 aa15.38■□□□□ 0.05
SNX1-214ENST00000625244 TTC22Q5TAA0 569 aa15.38■□□□□ 0.05
SNX1-214ENST00000625244 SLC8B1Q6J4K2 584 aa15.38■□□□□ 0.05
SNX1-214ENST00000625244 ETNPPLQ8TBG4 499 aa15.38■□□□□ 0.05
SNX1-214ENST00000625244 ADAM32Q8TC27 787 aa15.38■□□□□ 0.05
SNX1-214ENST00000625244 CCDC12Q8WUD4 166 aaPredicted RBP15.38■□□□□ 0.05
SNX1-214ENST00000625244 E2F7Q96AV8 911 aa15.38■□□□□ 0.05
SNX1-214ENST00000625244 TCEANC2Q96MN5 208 aa15.38■□□□□ 0.05
SNX1-214ENST00000625244 SLITRK6Q9H5Y7 841 aa15.38■□□□□ 0.05
SNX1-214ENST00000625244 XPNPEP1Q9NQW7 623 aa15.38■□□□□ 0.05
SNX1-214ENST00000625244 CEP72Q9P209 647 aa15.38■□□□□ 0.05
SNX1-214ENST00000625244 APC2O95996 2303 aa15.38■□□□□ 0.05
SNX1-214ENST00000625244 SPAARA0A1B0GVQ0 90 aa15.37■□□□□ 0.05
SNX1-214ENST00000625244 PATE3B3GLJ2 98 aa15.37■□□□□ 0.05
SNX1-214ENST00000625244 ZBTB39O15060 712 aa15.37■□□□□ 0.05
SNX1-214ENST00000625244 B3GAT3O94766 335 aa15.37■□□□□ 0.05
SNX1-214ENST00000625244 RHOBTB1O94844 696 aa15.37■□□□□ 0.05
SNX1-214ENST00000625244 EPHA5P54756 1037 aa15.37■□□□□ 0.05
SNX1-214ENST00000625244 ARPP19P56211 112 aa15.37■□□□□ 0.05
SNX1-214ENST00000625244 CAPSQ13938 189 aa15.37■□□□□ 0.05
SNX1-214ENST00000625244 MXD4Q14582 209 aaPredicted RBP15.37■□□□□ 0.05
SNX1-214ENST00000625244 SHKBP1Q8TBC3 707 aa15.37■□□□□ 0.05
SNX1-214ENST00000625244 ASAP3Q8TDY4 903 aa15.37■□□□□ 0.05
SNX1-214ENST00000625244 HHIPQ96QV1 700 aa15.37■□□□□ 0.05
SNX1-214ENST00000625244 MTRQ99707 1265 aa15.37■□□□□ 0.05
SNX1-214ENST00000625244 RWDD1Q9H446 243 aaPredicted RBP15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms