RNA–Protein interactions for RNA: ENST00000624930.1

SMG6-IT1-201, SMG6 intronic transcript 1, humanhuman

BASIC

Gene SMG6-IT1, Length 374 nt, Biotype TEC.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-IT1-201ENST00000624930 TNFSF9P41273 254 aa10.55□□□□□ -0.72
SMG6-IT1-201ENST00000624930 GRM5P41594 1212 aa10.55□□□□□ -0.72
SMG6-IT1-201ENST00000624930 NOP2P46087 812 aaKnown RBP10.55□□□□□ -0.72
SMG6-IT1-201ENST00000624930 PSEN2P49810 448 aa10.55□□□□□ -0.72
SMG6-IT1-201ENST00000624930 FCGRTP55899 365 aa10.55□□□□□ -0.72
SMG6-IT1-201ENST00000624930 NOP14P78316 857 aaKnown RBP10.55□□□□□ -0.72
SMG6-IT1-201ENST00000624930 MFSD10Q14728 455 aa10.55□□□□□ -0.72
SMG6-IT1-201ENST00000624930 EEF1DP3Q658K8 133 aa10.55□□□□□ -0.72
SMG6-IT1-201ENST00000624930 CCDC70Q6NSX1 233 aa10.55□□□□□ -0.72
SMG6-IT1-201ENST00000624930 NFRKBQ6P4R8 1299 aa10.55□□□□□ -0.72
SMG6-IT1-201ENST00000624930 ZBTB33Q86T24 672 aa10.55□□□□□ -0.72
SMG6-IT1-201ENST00000624930 SLC47A2Q86VL8 602 aa10.55□□□□□ -0.72
SMG6-IT1-201ENST00000624930 EIF1ADQ8N9N8 165 aaKnown RBP10.55□□□□□ -0.72
SMG6-IT1-201ENST00000624930 SPATA4Q8NEY3 305 aa10.55□□□□□ -0.72
SMG6-IT1-201ENST00000624930 COG1Q8WTW3 980 aa10.55□□□□□ -0.72
SMG6-IT1-201ENST00000624930 SLC20A1Q8WUM9 679 aa10.55□□□□□ -0.72
SMG6-IT1-201ENST00000624930 ADPGKQ9BRR6 497 aa10.55□□□□□ -0.72
SMG6-IT1-201ENST00000624930 NIF3L1Q9GZT8 377 aa10.55□□□□□ -0.72
SMG6-IT1-201ENST00000624930 UPF3AQ9H1J1 476 aaKnown RBP10.55□□□□□ -0.72
SMG6-IT1-201ENST00000624930 CYP3A43Q9HB55 503 aa10.55□□□□□ -0.72
SMG6-IT1-201ENST00000624930 FAM53CQ9NYF3 392 aa10.55□□□□□ -0.72
SMG6-IT1-201ENST00000624930 TMEM59LQ9UK28 342 aa10.55□□□□□ -0.72
SMG6-IT1-201ENST00000624930 AMFRQ9UKV5 643 aa10.55□□□□□ -0.72
SMG6-IT1-201ENST00000624930 AKT3Q9Y243 479 aa10.55□□□□□ -0.72
SMG6-IT1-201ENST00000624930 NUB1Q9Y5A7 615 aa10.55□□□□□ -0.72
SMG6-IT1-201ENST00000624930 PDE2AO00408 941 aaPredicted RBP10.54□□□□□ -0.72
SMG6-IT1-201ENST00000624930 B4GALT5O43286 388 aa10.54□□□□□ -0.72
SMG6-IT1-201ENST00000624930 BUB1BO60566 1050 aaPredicted RBP10.54□□□□□ -0.72
SMG6-IT1-201ENST00000624930 SRGAP2O75044 1071 aa10.54□□□□□ -0.72
SMG6-IT1-201ENST00000624930 GPR32O75388 356 aa10.54□□□□□ -0.72
SMG6-IT1-201ENST00000624930 ERLIN1O75477 346 aa10.54□□□□□ -0.72
SMG6-IT1-201ENST00000624930 CLSTN1O94985 981 aa10.54□□□□□ -0.72
SMG6-IT1-201ENST00000624930 LSM8O95777 96 aaKnown RBP10.54□□□□□ -0.72
SMG6-IT1-201ENST00000624930 CST3P01034 146 aaPredicted RBP10.54□□□□□ -0.72
SMG6-IT1-201ENST00000624930 GJB1P08034 283 aa10.54□□□□□ -0.72
SMG6-IT1-201ENST00000624930 TMEM191BP0C7N4 346 aa10.54□□□□□ -0.72
SMG6-IT1-201ENST00000624930 STAG3L1P0CL83 205 aa10.54□□□□□ -0.72
SMG6-IT1-201ENST00000624930 ARF4P18085 180 aaPredicted RBP10.54□□□□□ -0.72
SMG6-IT1-201ENST00000624930 USP8P40818 1118 aa10.54□□□□□ -0.72
SMG6-IT1-201ENST00000624930 GJA9P57773 515 aa10.54□□□□□ -0.72
SMG6-IT1-201ENST00000624930 IGBP1P78318 339 aa10.54□□□□□ -0.72
SMG6-IT1-201ENST00000624930 RBM10P98175 930 aaKnown RBP10.54□□□□□ -0.72
SMG6-IT1-201ENST00000624930 CENPCQ03188 943 aa10.54□□□□□ -0.72
SMG6-IT1-201ENST00000624930 CRHR2Q13324 411 aa10.54□□□□□ -0.72
SMG6-IT1-201ENST00000624930 TRPC3Q13507 836 aa10.54□□□□□ -0.72
SMG6-IT1-201ENST00000624930 PPP2R5EQ16537 467 aa10.54□□□□□ -0.72
SMG6-IT1-201ENST00000624930 CCDC181Q5TID7 509 aa10.54□□□□□ -0.72
SMG6-IT1-201ENST00000624930 MFSD14CQ5VZR4 134 aa10.54□□□□□ -0.72
SMG6-IT1-201ENST00000624930 TMCO3Q6UWJ1 677 aa10.54□□□□□ -0.72
SMG6-IT1-201ENST00000624930 PEX26Q7Z412 305 aa10.54□□□□□ -0.72
SMG6-IT1-201ENST00000624930 RPAINQ86UA6 219 aa10.54□□□□□ -0.72
SMG6-IT1-201ENST00000624930 PALB2Q86YC2 1186 aa10.54□□□□□ -0.72
SMG6-IT1-201ENST00000624930 PHF13Q86YI8 300 aaPredicted RBP10.54□□□□□ -0.72
SMG6-IT1-201ENST00000624930 THNSL1Q8IYQ7 743 aa10.54□□□□□ -0.72
SMG6-IT1-201ENST00000624930 CXorf38Q8TB03 319 aa10.54□□□□□ -0.72
SMG6-IT1-201ENST00000624930 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.54□□□□□ -0.72
SMG6-IT1-201ENST00000624930 PI4K2AQ9BTU6 479 aa10.54□□□□□ -0.72
SMG6-IT1-201ENST00000624930 BCO2Q9BYV7 579 aa10.54□□□□□ -0.72
SMG6-IT1-201ENST00000624930 THAP2Q9H0W7 228 aa10.54□□□□□ -0.72
SMG6-IT1-201ENST00000624930 XYLT2Q9H1B5 865 aa10.54□□□□□ -0.72
SMG6-IT1-201ENST00000624930 CARD9Q9H257 536 aa10.54□□□□□ -0.72
SMG6-IT1-201ENST00000624930 TAS2R14Q9NYV8 317 aa10.54□□□□□ -0.72
SMG6-IT1-201ENST00000624930 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.54□□□□□ -0.72
SMG6-IT1-201ENST00000624930 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.54□□□□□ -0.72
SMG6-IT1-201ENST00000624930 V9GYY5 206 aaPredicted RBP10.54□□□□□ -0.72
SMG6-IT1-201ENST00000624930 CCDC188H7C350 402 aa10.53□□□□□ -0.72
SMG6-IT1-201ENST00000624930 ERLIN2O94905 339 aa10.53□□□□□ -0.72
SMG6-IT1-201ENST00000624930 VTNP04004 478 aa10.53□□□□□ -0.72
SMG6-IT1-201ENST00000624930 MMEP08473 750 aa10.53□□□□□ -0.72
SMG6-IT1-201ENST00000624930 PAEPP09466 180 aa10.53□□□□□ -0.72
SMG6-IT1-201ENST00000624930 CYBAP13498 195 aa10.53□□□□□ -0.72
SMG6-IT1-201ENST00000624930 KRT5P13647 590 aa10.53□□□□□ -0.72
SMG6-IT1-201ENST00000624930 DARSP14868 501 aaKnown RBP10.53□□□□□ -0.72
SMG6-IT1-201ENST00000624930 CYP2B6P20813 491 aa10.53□□□□□ -0.72
SMG6-IT1-201ENST00000624930 EIF4BP23588 611 aaKnown RBP10.53□□□□□ -0.72
SMG6-IT1-201ENST00000624930 HOXA11P31270 313 aaPredicted RBP10.53□□□□□ -0.72
SMG6-IT1-201ENST00000624930 CDH5P33151 784 aaPredicted RBP10.53□□□□□ -0.72
SMG6-IT1-201ENST00000624930 CYP2C19P33261 490 aa10.53□□□□□ -0.72
SMG6-IT1-201ENST00000624930 CLCN6P51797 869 aa10.53□□□□□ -0.72
SMG6-IT1-201ENST00000624930 C1QBPQ07021 282 aaKnown RBP10.53□□□□□ -0.72
SMG6-IT1-201ENST00000624930 NOGQ13253 232 aa10.53□□□□□ -0.72
SMG6-IT1-201ENST00000624930 SLC10A6Q3KNW5 377 aa10.53□□□□□ -0.72
SMG6-IT1-201ENST00000624930 PRAMEF19Q5SWL8 479 aa10.53□□□□□ -0.72
SMG6-IT1-201ENST00000624930 CC2D1AQ6P1N0 951 aaPredicted RBP10.53□□□□□ -0.72
SMG6-IT1-201ENST00000624930 TAF2Q6P1X5 1199 aa10.53□□□□□ -0.72
SMG6-IT1-201ENST00000624930 SLC27A1Q6PCB7 646 aa10.53□□□□□ -0.72
SMG6-IT1-201ENST00000624930 DAAM2Q86T65 1068 aa10.53□□□□□ -0.72
SMG6-IT1-201ENST00000624930 GPIHBP1Q8IV16 184 aa10.53□□□□□ -0.72
SMG6-IT1-201ENST00000624930 MCOLN2Q8IZK6 566 aa10.53□□□□□ -0.72
SMG6-IT1-201ENST00000624930 NOA1Q8NC60 698 aaKnown RBP10.53□□□□□ -0.72
SMG6-IT1-201ENST00000624930 CAGE1Q8TC20 777 aa10.53□□□□□ -0.72
SMG6-IT1-201ENST00000624930 NLRP7Q8WX94 980 aa10.53□□□□□ -0.72
SMG6-IT1-201ENST00000624930 ACAP3Q96P50 834 aa10.53□□□□□ -0.72
SMG6-IT1-201ENST00000624930 NAP1L3Q99457 506 aaPredicted RBP10.53□□□□□ -0.72
SMG6-IT1-201ENST00000624930 WNT8AQ9H1J5 351 aa10.53□□□□□ -0.72
SMG6-IT1-201ENST00000624930 ARFGAP3Q9NP61 516 aa10.53□□□□□ -0.72
SMG6-IT1-201ENST00000624930 SETD4Q9NVD3 440 aa10.53□□□□□ -0.72
SMG6-IT1-201ENST00000624930 ITGA11Q9UKX5 1188 aa10.53□□□□□ -0.72
SMG6-IT1-201ENST00000624930 KIAA1257Q9ULG3 409 aa10.53□□□□□ -0.72
SMG6-IT1-201ENST00000624930 PCDHGC3Q9UN70 934 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms