RNA–Protein interactions for RNA: ENST00000624009.3

LINC00963-217, long intergenic non-protein coding RNA 963, humanhuman

TSL 5 BASIC

Gene LINC00963, Length 663 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-217ENST00000624009 RTP2Q5QGT7 225 aa13.55□□□□□ -0.24
LINC00963-217ENST00000624009 SLC39A4Q6P5W5 647 aa13.55□□□□□ -0.24
LINC00963-217ENST00000624009 CD300LGQ6UXG3 332 aa13.55□□□□□ -0.24
LINC00963-217ENST00000624009 ANKS3Q6ZW76 656 aa13.55□□□□□ -0.24
LINC00963-217ENST00000624009 NT5DC4Q86YG4 428 aa13.55□□□□□ -0.24
LINC00963-217ENST00000624009 PDILTQ8N807 584 aa13.55□□□□□ -0.24
LINC00963-217ENST00000624009 ACCSQ96QU6 501 aa13.55□□□□□ -0.24
LINC00963-217ENST00000624009 OXCT2Q9BYC2 517 aaPredicted RBP13.55□□□□□ -0.24
LINC00963-217ENST00000624009 TRIM9Q9C026 710 aa13.55□□□□□ -0.24
LINC00963-217ENST00000624009 TMEM206Q9H813 350 aa13.55□□□□□ -0.24
LINC00963-217ENST00000624009 RPF1Q9H9Y2 349 aaKnown RBP13.55□□□□□ -0.24
LINC00963-217ENST00000624009 PANK4Q9NVE7 773 aa13.55□□□□□ -0.24
LINC00963-217ENST00000624009 FAM13BQ9NYF5 915 aa13.55□□□□□ -0.24
LINC00963-217ENST00000624009 MTRRQ9UBK8 725 aa13.55□□□□□ -0.24
LINC00963-217ENST00000624009 PCDHA7Q9UN72 937 aa13.55□□□□□ -0.24
LINC00963-217ENST00000624009 HARSP12081 509 aaKnown RBP13.54□□□□□ -0.24
LINC00963-217ENST00000624009 GARTP22102 1010 aa13.54□□□□□ -0.24
LINC00963-217ENST00000624009 HOXA9P31269 272 aa13.54□□□□□ -0.24
LINC00963-217ENST00000624009 KRT85P78386 507 aa13.54□□□□□ -0.24
LINC00963-217ENST00000624009 DNM1Q05193 864 aaKnown RBP13.54□□□□□ -0.24
LINC00963-217ENST00000624009 RAB33AQ14088 237 aa13.54□□□□□ -0.24
LINC00963-217ENST00000624009 ENOX2Q16206 610 aaKnown RBP13.54□□□□□ -0.24
LINC00963-217ENST00000624009 UVSSAQ2YD98 709 aa13.54□□□□□ -0.24
LINC00963-217ENST00000624009 ZC2HC1CQ53FD0 456 aaPredicted RBP13.54□□□□□ -0.24
LINC00963-217ENST00000624009 ADALQ6DHV7 355 aa13.54□□□□□ -0.24
LINC00963-217ENST00000624009 PLCD3Q8N3E9 789 aa13.54□□□□□ -0.24
LINC00963-217ENST00000624009 C3orf58Q8NDZ4 430 aa13.54□□□□□ -0.24
LINC00963-217ENST00000624009 C7orf25Q9BPX7 421 aa13.54□□□□□ -0.24
LINC00963-217ENST00000624009 CLSTN3Q9BQT9 956 aa13.54□□□□□ -0.24
LINC00963-217ENST00000624009 PANK2Q9BZ23 570 aa13.54□□□□□ -0.24
LINC00963-217ENST00000624009 SCAND2PQ9GZW5 306 aaPredicted RBP13.54□□□□□ -0.24
LINC00963-217ENST00000624009 MAN1C1Q9NR34 630 aa13.54□□□□□ -0.24
LINC00963-217ENST00000624009 USP25Q9UHP3 1055 aa13.54□□□□□ -0.24
LINC00963-217ENST00000624009 MAFFQ9ULX9 164 aa13.54□□□□□ -0.24
LINC00963-217ENST00000624009 C2CD2Q9Y426 696 aa13.54□□□□□ -0.24
LINC00963-217ENST00000624009 PVALEFA0A1B0GWK0 134 aa13.53□□□□□ -0.24
LINC00963-217ENST00000624009 EIF3DO15371 548 aaKnown RBP eCLIP13.53□□□□□ -0.24
LINC00963-217ENST00000624009 TGM5O43548 720 aa13.53□□□□□ -0.24
LINC00963-217ENST00000624009 LDHAP00338 332 aaKnown RBP13.53□□□□□ -0.24
LINC00963-217ENST00000624009 MYL1P05976 194 aa13.53□□□□□ -0.24
LINC00963-217ENST00000624009 HNRNPA1P09651 372 aaKnown RBP eCLIP13.53□□□□□ -0.24
LINC00963-217ENST00000624009 IDEP14735 1019 aa13.53□□□□□ -0.24
LINC00963-217ENST00000624009 CMA1P23946 247 aa13.53□□□□□ -0.24
LINC00963-217ENST00000624009 AARSP49588 968 aaKnown RBP eCLIP13.53□□□□□ -0.241e-6■■■■■ 52.5
LINC00963-217ENST00000624009 SNRPFP62306 86 aaKnown RBP13.53□□□□□ -0.24
LINC00963-217ENST00000624009 RARS2Q5T160 578 aaKnown RBP13.53□□□□□ -0.24
LINC00963-217ENST00000624009 SLC8B1Q6J4K2 584 aa13.53□□□□□ -0.24
LINC00963-217ENST00000624009 RNF135Q8IUD6 432 aa13.53□□□□□ -0.24
LINC00963-217ENST00000624009 APPL2Q8NEU8 664 aa13.53□□□□□ -0.24
LINC00963-217ENST00000624009 HASPINQ8TF76 798 aa13.53□□□□□ -0.24
LINC00963-217ENST00000624009 RABGGTAQ92696 567 aa13.53□□□□□ -0.24
LINC00963-217ENST00000624009 KIF12Q96FN5 646 aa13.53□□□□□ -0.24
LINC00963-217ENST00000624009 SUSD3Q96L08 255 aa13.53□□□□□ -0.24
LINC00963-217ENST00000624009 GOLGA2P5Q9HBQ8 144 aa13.53□□□□□ -0.24
LINC00963-217ENST00000624009 CACNG4Q9UBN1 327 aa13.53□□□□□ -0.24
LINC00963-217ENST00000624009 FBXW11Q9UKB1 542 aa13.53□□□□□ -0.24
LINC00963-217ENST00000624009 AGO2Q9UKV8 859 aaKnown RBP13.53□□□□□ -0.24
LINC00963-217ENST00000624009 ZDHHC9Q9Y397 364 aa13.53□□□□□ -0.24
LINC00963-217ENST00000624009 NOTCH4Q99466 2003 aa13.52□□□□□ -0.24
LINC00963-217ENST00000624009 FAM237AA0A1B0GTK4 181 aa13.52□□□□□ -0.25
LINC00963-217ENST00000624009 ARHGEF37A1IGU5 675 aa13.52□□□□□ -0.25
LINC00963-217ENST00000624009 LACTBL1A8MY62 500 aa13.52□□□□□ -0.25
LINC00963-217ENST00000624009 H7C4K7 107 aa13.52□□□□□ -0.25
LINC00963-217ENST00000624009 M0QZQ0 153 aa13.52□□□□□ -0.25
LINC00963-217ENST00000624009 POLR2DO15514 142 aaKnown RBP13.52□□□□□ -0.25
LINC00963-217ENST00000624009 TBC1D4O60343 1298 aa13.52□□□□□ -0.25
LINC00963-217ENST00000624009 IL18RAPO95256 599 aa13.52□□□□□ -0.25
LINC00963-217ENST00000624009 GCNT3O95395 438 aa13.52□□□□□ -0.25
LINC00963-217ENST00000624009 ADSSP30520 456 aa13.52□□□□□ -0.25
LINC00963-217ENST00000624009 TNFSF9P41273 254 aa13.52□□□□□ -0.25
LINC00963-217ENST00000624009 EHHADHQ08426 723 aa13.52□□□□□ -0.25
LINC00963-217ENST00000624009 MRPL58Q14197 206 aaKnown RBP13.52□□□□□ -0.25
LINC00963-217ENST00000624009 FOXD4L5Q5VV16 416 aaPredicted RBP13.52□□□□□ -0.25
LINC00963-217ENST00000624009 SPATA1Q5VX52 437 aa13.52□□□□□ -0.25
LINC00963-217ENST00000624009 PRSS55Q6UWB4 352 aaPredicted RBP13.52□□□□□ -0.25
LINC00963-217ENST00000624009 CCDC149Q6ZUS6 474 aa13.52□□□□□ -0.25
LINC00963-217ENST00000624009 OTOP3Q7RTS5 596 aa13.52□□□□□ -0.25
LINC00963-217ENST00000624009 CEP57Q86XR8 500 aa13.52□□□□□ -0.25
LINC00963-217ENST00000624009 ZDHHC14Q8IZN3 488 aa13.52□□□□□ -0.25
LINC00963-217ENST00000624009 KREMEN2Q8NCW0 462 aa13.52□□□□□ -0.25
LINC00963-217ENST00000624009 FOXD4L4Q8WXT5 416 aaPredicted RBP13.52□□□□□ -0.25
LINC00963-217ENST00000624009 STAMQ92783 540 aa13.52□□□□□ -0.25
LINC00963-217ENST00000624009 C18orf25Q96B23 403 aaPredicted RBP13.52□□□□□ -0.25
LINC00963-217ENST00000624009 DHX58Q96C10 678 aa13.52□□□□□ -0.25
LINC00963-217ENST00000624009 B3GALT6Q96L58 329 aa13.52□□□□□ -0.25
LINC00963-217ENST00000624009 POMKQ9H5K3 350 aa13.52□□□□□ -0.25
LINC00963-217ENST00000624009 EPHX3Q9H6B9 360 aa13.52□□□□□ -0.25
LINC00963-217ENST00000624009 KCNH3Q9ULD8 1083 aa13.52□□□□□ -0.25
LINC00963-217ENST00000624009 NUB1Q9Y5A7 615 aa13.52□□□□□ -0.25
LINC00963-217ENST00000624009 UBE4BO95155 1302 aa13.52□□□□□ -0.25
LINC00963-217ENST00000624009 SPDYE4A6NLX3 237 aa13.51□□□□□ -0.25
LINC00963-217ENST00000624009 PRR33A8MZF0 331 aa13.51□□□□□ -0.25
LINC00963-217ENST00000624009 ANKRD63C9JTQ0 380 aa13.51□□□□□ -0.25
LINC00963-217ENST00000624009 ZMYND10O75800 440 aa13.51□□□□□ -0.25
LINC00963-217ENST00000624009 SLFN14P0C7P3 912 aa13.51□□□□□ -0.25
LINC00963-217ENST00000624009 TKTP29401 623 aaKnown RBP13.51□□□□□ -0.25
LINC00963-217ENST00000624009 SEZ6Q53EL9 994 aa13.51□□□□□ -0.25
LINC00963-217ENST00000624009 TMEM31Q5JXX7 168 aa13.51□□□□□ -0.25
LINC00963-217ENST00000624009 LIN9Q5TKA1 542 aa13.51□□□□□ -0.25
LINC00963-217ENST00000624009 TPGS2Q68CL5 300 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms