RNA–Protein interactions for RNA: ENST00000622702.1

PDLIM2-221, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5 BASIC

Gene PDLIM2, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-221ENST00000622702 NOMO2Q5JPE7 1267 aa21.46■■□□□ 1.03
PDLIM2-221ENST00000622702 APTXQ7Z2E3 356 aaKnown RBP21.46■■□□□ 1.03
PDLIM2-221ENST00000622702 ABI1Q8IZP0 508 aa21.46■■□□□ 1.03
PDLIM2-221ENST00000622702 HELQQ8TDG4 1101 aa21.46■■□□□ 1.03
PDLIM2-221ENST00000622702 PPP1R10Q96QC0 940 aaKnown RBP21.46■■□□□ 1.03
PDLIM2-221ENST00000622702 POP1Q99575 1024 aaKnown RBP21.46■■□□□ 1.03
PDLIM2-221ENST00000622702 CDX2Q99626 313 aaPredicted RBP21.46■■□□□ 1.03
PDLIM2-221ENST00000622702 INTS13Q9NVM9 706 aa21.46■■□□□ 1.03
PDLIM2-221ENST00000622702 GTF3C5Q9Y5Q8 519 aaPredicted RBP21.46■■□□□ 1.03
PDLIM2-221ENST00000622702 PTPRJQ12913 1337 aa21.46■■□□□ 1.03
PDLIM2-221ENST00000622702 STX10O60499 249 aa21.45■■□□□ 1.03
PDLIM2-221ENST00000622702 NFICP08651 508 aa21.45■■□□□ 1.03
PDLIM2-221ENST00000622702 TNNI1P19237 187 aa21.45■■□□□ 1.03
PDLIM2-221ENST00000622702 SCNN1GP51170 649 aa21.45■■□□□ 1.03
PDLIM2-221ENST00000622702 GRIK3Q13003 919 aa21.45■■□□□ 1.03
PDLIM2-221ENST00000622702 GLRA4Q5JXX5 417 aa21.45■■□□□ 1.03
PDLIM2-221ENST00000622702 TCERG1LQ5VWI1 586 aa21.45■■□□□ 1.03
PDLIM2-221ENST00000622702 NLRC5Q86WI3 1866 aa21.45■■□□□ 1.03
PDLIM2-221ENST00000622702 URGCPQ8TCY9 931 aa21.45■■□□□ 1.03
PDLIM2-221ENST00000622702 KIF12Q96FN5 646 aa21.45■■□□□ 1.03
PDLIM2-221ENST00000622702 CASD1Q96PB1 797 aa21.45■■□□□ 1.03
PDLIM2-221ENST00000622702 MIOSQ9NXC5 875 aa21.45■■□□□ 1.03
PDLIM2-221ENST00000622702 KANSL3Q9P2N6 904 aa21.45■■□□□ 1.03
PDLIM2-221ENST00000622702 PLAGL2Q9UPG8 496 aa21.45■■□□□ 1.03
PDLIM2-221ENST00000622702 MRPL42Q9Y6G3 142 aaKnown RBP21.45■■□□□ 1.03
PDLIM2-221ENST00000622702 PDCD11Q14690 1871 aaKnown RBP21.45■■□□□ 1.02
PDLIM2-221ENST00000622702 THP07101 528 aa21.45■■□□□ 1.02
PDLIM2-221ENST00000622702 PPP3CAQ08209 521 aa21.45■■□□□ 1.02
PDLIM2-221ENST00000622702 DUOXA2Q1HG44 320 aa21.45■■□□□ 1.02
PDLIM2-221ENST00000622702 OR5B17Q8NGF7 314 aa21.45■■□□□ 1.02
PDLIM2-221ENST00000622702 CACTINQ8WUQ7 758 aaKnown RBP21.45■■□□□ 1.02
PDLIM2-221ENST00000622702 ZNF516Q92618 1163 aa21.45■■□□□ 1.02
PDLIM2-221ENST00000622702 SLC38A7Q9NVC3 462 aa21.45■■□□□ 1.02
PDLIM2-221ENST00000622702 UBQLN1Q9UMX0 589 aaKnown RBP21.45■■□□□ 1.02
PDLIM2-221ENST00000622702 INPP5FQ9Y2H2 1132 aa21.45■■□□□ 1.02
PDLIM2-221ENST00000622702 MYO9BQ13459 2157 aa21.44■■□□□ 1.02
PDLIM2-221ENST00000622702 RFXAPO00287 272 aa21.44■■□□□ 1.02
PDLIM2-221ENST00000622702 XPOTO43592 962 aaKnown RBP21.44■■□□□ 1.02
PDLIM2-221ENST00000622702 PRKCSHP14314 528 aaPredicted RBP21.44■■□□□ 1.02
PDLIM2-221ENST00000622702 CYP3A5P20815 502 aa21.44■■□□□ 1.02
PDLIM2-221ENST00000622702 COPB1P53618 953 aaKnown RBP21.44■■□□□ 1.02
PDLIM2-221ENST00000622702 TFAMQ00059 246 aaKnown RBP21.44■■□□□ 1.02
PDLIM2-221ENST00000622702 KCNH2Q12809 1159 aa21.44■■□□□ 1.02
PDLIM2-221ENST00000622702 NAB2Q15742 525 aa21.44■■□□□ 1.02
PDLIM2-221ENST00000622702 MIIPQ5JXC2 388 aa21.44■■□□□ 1.02
PDLIM2-221ENST00000622702 LMBRD2Q68DH5 695 aaPredicted RBP21.44■■□□□ 1.02
PDLIM2-221ENST00000622702 C15orf39Q6ZRI6 1047 aa21.44■■□□□ 1.02
PDLIM2-221ENST00000622702 MYLIPQ8WY64 445 aa21.44■■□□□ 1.02
PDLIM2-221ENST00000622702 SAMD11Q96NU1 681 aa21.44■■□□□ 1.02
PDLIM2-221ENST00000622702 MRPL9Q9BYD2 267 aaKnown RBP21.44■■□□□ 1.02
PDLIM2-221ENST00000622702 TAB2Q9NYJ8 693 aa21.44■■□□□ 1.02
PDLIM2-221ENST00000622702 EPOPA6NHQ4 379 aa21.43■■□□□ 1.02
PDLIM2-221ENST00000622702 PMM2O15305 246 aa21.43■■□□□ 1.02
PDLIM2-221ENST00000622702 POMCP01189 267 aa21.43■■□□□ 1.02
PDLIM2-221ENST00000622702 AFPP02771 609 aaKnown RBP21.43■■□□□ 1.02
PDLIM2-221ENST00000622702 C4BPAP04003 597 aaKnown RBP21.43■■□□□ 1.02
PDLIM2-221ENST00000622702 TPM2P07951 284 aa21.43■■□□□ 1.02
PDLIM2-221ENST00000622702 TMEM191BP0C7N4 346 aa21.43■■□□□ 1.02
PDLIM2-221ENST00000622702 LINC00271P0C7V0 271 aa21.43■■□□□ 1.02
PDLIM2-221ENST00000622702 UVSSAQ2YD98 709 aa21.43■■□□□ 1.02
PDLIM2-221ENST00000622702 ZACNQ401N2 412 aa21.43■■□□□ 1.02
PDLIM2-221ENST00000622702 VWA3BQ502W6 1294 aa21.43■■□□□ 1.02
PDLIM2-221ENST00000622702 EPC2Q52LR7 807 aa21.43■■□□□ 1.02
PDLIM2-221ENST00000622702 SV2AQ7L0J3 742 aa21.43■■□□□ 1.02
PDLIM2-221ENST00000622702 CLP1Q92989 425 aaKnown RBP21.43■■□□□ 1.02
PDLIM2-221ENST00000622702 ANKRD36BP1Q96IX9 119 aa21.43■■□□□ 1.02
PDLIM2-221ENST00000622702 MTMR12Q9C0I1 747 aa21.43■■□□□ 1.02
PDLIM2-221ENST00000622702 NDST4Q9H3R1 872 aa21.43■■□□□ 1.02
PDLIM2-221ENST00000622702 TMEM8AQ9HCN3 771 aa21.43■■□□□ 1.02
PDLIM2-221ENST00000622702 TBC1D13Q9NVG8 400 aa21.43■■□□□ 1.02
PDLIM2-221ENST00000622702 KIAA1671Q9BY89 1806 aa21.43■■□□□ 1.02
PDLIM2-221ENST00000622702 TULP1O00294 542 aaPredicted RBP21.42■■□□□ 1.02
PDLIM2-221ENST00000622702 TNNC2P02585 160 aa21.42■■□□□ 1.02
PDLIM2-221ENST00000622702 CTNNB1P35222 781 aa21.42■■□□□ 1.02
PDLIM2-221ENST00000622702 GCLMP48507 274 aa21.42■■□□□ 1.02
PDLIM2-221ENST00000622702 FMO5P49326 533 aa21.42■■□□□ 1.02
PDLIM2-221ENST00000622702 FANCCQ00597 558 aa21.42■■□□□ 1.02
PDLIM2-221ENST00000622702 SPOUT1Q5T280 376 aaKnown RBP21.42■■□□□ 1.02
PDLIM2-221ENST00000622702 FBXO22Q8NEZ5 403 aa21.42■■□□□ 1.02
PDLIM2-221ENST00000622702 BEST2Q8NFU1 509 aa21.42■■□□□ 1.02
PDLIM2-221ENST00000622702 FAM84AQ96KN4 292 aa21.42■■□□□ 1.02
PDLIM2-221ENST00000622702 HCSTQ9UBK5 93 aa21.42■■□□□ 1.02
PDLIM2-221ENST00000622702 P4HA2O15460 535 aa21.41■■□□□ 1.02
PDLIM2-221ENST00000622702 N4BP1O75113 896 aaKnown RBP21.41■■□□□ 1.02
PDLIM2-221ENST00000622702 BMPR1AP36894 532 aa21.41■■□□□ 1.02
PDLIM2-221ENST00000622702 MXI1P50539 228 aa21.41■■□□□ 1.02
PDLIM2-221ENST00000622702 DSC1Q08554 894 aa21.41■■□□□ 1.02
PDLIM2-221ENST00000622702 TUSC3Q13454 348 aa21.41■■□□□ 1.02
PDLIM2-221ENST00000622702 CBWD6Q4V339 395 aa21.41■■□□□ 1.02
PDLIM2-221ENST00000622702 CBWD3Q5JTY5 395 aa21.41■■□□□ 1.02
PDLIM2-221ENST00000622702 CBWD5Q5RIA9 395 aa21.41■■□□□ 1.02
PDLIM2-221ENST00000622702 KRT39Q6A163 491 aa21.41■■□□□ 1.02
PDLIM2-221ENST00000622702 TRAPPC11Q7Z392 1133 aa21.41■■□□□ 1.02
PDLIM2-221ENST00000622702 LRRC43Q8N309 656 aa21.41■■□□□ 1.02
PDLIM2-221ENST00000622702 C1orf127Q8N9H9 656 aa21.41■■□□□ 1.02
PDLIM2-221ENST00000622702 C18orf25Q96B23 403 aaPredicted RBP21.41■■□□□ 1.02
PDLIM2-221ENST00000622702 GAS2L1Q99501 681 aaPredicted RBP21.41■■□□□ 1.02
PDLIM2-221ENST00000622702 VPS16Q9H269 839 aa21.41■■□□□ 1.02
PDLIM2-221ENST00000622702 TUBGCP4Q9UGJ1 667 aa21.41■■□□□ 1.02
PDLIM2-221ENST00000622702 RWDD3Q9Y3V2 267 aa21.41■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms